RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 FHAD1B1AJZ9 1412 aa29.46■■■□□ 2.31
LIMS2-204ENST00000409286 PBRM1Q86U86 1689 aa29.45■■■□□ 2.31
LIMS2-204ENST00000409286 MAP3K1Q13233 1512 aa29.45■■■□□ 2.3
LIMS2-204ENST00000409286 AQRO60306 1485 aaKnown RBP eCLIP29.42■■■□□ 2.3
LIMS2-204ENST00000409286 KANK4Q5T7N3 995 aaPredicted RBP29.42■■■□□ 2.3
LIMS2-204ENST00000409286 GRIN2BQ13224 1484 aa29.41■■■□□ 2.3
LIMS2-204ENST00000409286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.36■■■□□ 2.29
LIMS2-204ENST00000409286 CCER1Q8TC90 406 aaPredicted RBP29.34■■■□□ 2.29
LIMS2-204ENST00000409286 ADAMTS12P58397 1594 aa29.33■■■□□ 2.29
LIMS2-204ENST00000409286 P3H3Q8IVL6 736 aa29.32■■■□□ 2.28
LIMS2-204ENST00000409286 FHOD3Q2V2M9 1422 aa29.32■■■□□ 2.28
LIMS2-204ENST00000409286 TIAM1Q13009 1591 aa29.31■■■□□ 2.28
LIMS2-204ENST00000409286 ZNF608Q9ULD9 1512 aaPredicted RBP29.31■■■□□ 2.28
LIMS2-204ENST00000409286 SAMD9Q5K651 1589 aa29.27■■■□□ 2.28
LIMS2-204ENST00000409286 FMN1Q68DA7 1419 aa29.27■■■□□ 2.28
LIMS2-204ENST00000409286 CASKIN1Q8WXD9 1431 aa29.27■■■□□ 2.28
LIMS2-204ENST00000409286 FYCO1Q9BQS8 1478 aa29.25■■■□□ 2.27
LIMS2-204ENST00000409286 PCF11O94913 1555 aaKnown RBP29.24■■■□□ 2.27
LIMS2-204ENST00000409286 RRBP1Q9P2E9 1410 aaKnown RBP29.24■■■□□ 2.27
LIMS2-204ENST00000409286 HNRNPUL2Q1KMD3 747 aaKnown RBP29.24■■■□□ 2.27
LIMS2-204ENST00000409286 EIF4G3O43432 1585 aaKnown RBP29.23■■■□□ 2.27
LIMS2-204ENST00000409286 LRRC9Q6ZRR7 1453 aa29.21■■■□□ 2.27
LIMS2-204ENST00000409286 CFAP43Q8NDM7 1665 aa29.18■■■□□ 2.26
LIMS2-204ENST00000409286 SNAPC4Q5SXM2 1469 aa29.13■■■□□ 2.25
LIMS2-204ENST00000409286 IQGAP2Q13576 1575 aa29.13■■■□□ 2.25
LIMS2-204ENST00000409286 CCNB3Q8WWL7 1395 aa29.12■■■□□ 2.25
LIMS2-204ENST00000409286 MAGI1Q96QZ7 1491 aaPredicted RBP29.12■■■□□ 2.25
LIMS2-204ENST00000409286 ATP1B4Q9UN42 357 aaPredicted RBP29.1■■■□□ 2.25
LIMS2-204ENST00000409286 KIAA0586Q9BVV6 1533 aa29.05■■■□□ 2.24
LIMS2-204ENST00000409286 GRIN2AQ12879 1464 aa29.04■■■□□ 2.24
LIMS2-204ENST00000409286 UGGT2Q9NYU1 1516 aa29.03■■■□□ 2.24
LIMS2-204ENST00000409286 SYNJ2O15056 1496 aa28.98■■■□□ 2.23
LIMS2-204ENST00000409286 PHLDB1Q86UU1 1377 aa28.97■■■□□ 2.23
LIMS2-204ENST00000409286 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
LIMS2-204ENST00000409286 CCDC18Q5T9S5 1454 aa28.89■■■□□ 2.21
LIMS2-204ENST00000409286 MTUS2Q5JR59 1369 aa28.87■■■□□ 2.21
LIMS2-204ENST00000409286 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.85■■■□□ 2.21
LIMS2-204ENST00000409286 LRRIQ1Q96JM4 1722 aa28.85■■■□□ 2.21
LIMS2-204ENST00000409286 DISP1Q96F81 1524 aa28.84■■■□□ 2.21
LIMS2-204ENST00000409286 HECW1Q76N89 1606 aa28.84■■■□□ 2.21
LIMS2-204ENST00000409286 KIAA0556O60303 1618 aa28.82■■■□□ 2.2
LIMS2-204ENST00000409286 NUP160Q12769 1436 aa28.82■■■□□ 2.2
LIMS2-204ENST00000409286 CLSPNQ9HAW4 1339 aa28.81■■■□□ 2.2
LIMS2-204ENST00000409286 CEP170Q5SW79 1584 aa28.81■■■□□ 2.2
LIMS2-204ENST00000409286 EHBP1L1Q8N3D4 1523 aa28.79■■■□□ 2.2
LIMS2-204ENST00000409286 FBLN2P98095 1184 aa28.77■■■□□ 2.2
LIMS2-204ENST00000409286 FAM50AQ14320 339 aaKnown RBP28.76■■■□□ 2.19
LIMS2-204ENST00000409286 EPRSP07814 1512 aaKnown RBP28.75■■■□□ 2.19
LIMS2-204ENST00000409286 ITGAEP38570 1179 aa28.75■■■□□ 2.19
LIMS2-204ENST00000409286 DHX57Q6P158 1386 aaKnown RBP28.74■■■□□ 2.19
LIMS2-204ENST00000409286 FGD6Q6ZV73 1430 aa28.73■■■□□ 2.19
LIMS2-204ENST00000409286 SUPT6HQ7KZ85 1726 aaKnown RBP28.72■■■□□ 2.19
LIMS2-204ENST00000409286 NCOA2Q15596 1464 aa28.72■■■□□ 2.19
LIMS2-204ENST00000409286 ARHGEF11O15085 1522 aa28.68■■■□□ 2.18
LIMS2-204ENST00000409286 JPH4Q96JJ6 628 aa28.67■■■□□ 2.18
LIMS2-204ENST00000409286 MYOM3Q5VTT5 1437 aa28.67■■■□□ 2.18
LIMS2-204ENST00000409286 CARMIL2Q6F5E8 1435 aa28.67■■■□□ 2.18
LIMS2-204ENST00000409286 SETD5Q9C0A6 1442 aa28.67■■■□□ 2.18
LIMS2-204ENST00000409286 MAGI3Q5TCQ9 1506 aa28.66■■■□□ 2.18
LIMS2-204ENST00000409286 RAB3GAP2Q9H2M9 1393 aa28.63■■■□□ 2.17
LIMS2-204ENST00000409286 RAPGEF6Q8TEU7 1601 aa28.61■■■□□ 2.17
LIMS2-204ENST00000409286 CDK13Q14004 1512 aaKnown RBP28.61■■■□□ 2.17
LIMS2-204ENST00000409286 NUP153P49790 1475 aaKnown RBP28.58■■■□□ 2.17
LIMS2-204ENST00000409286 CHD1O14646 1710 aa28.53■■■□□ 2.16
LIMS2-204ENST00000409286 CDK11AQ9UQ88 783 aaPredicted RBP28.53■■■□□ 2.16
LIMS2-204ENST00000409286 TCOF1Q13428 1488 aaKnown RBP28.5■■■□□ 2.15
LIMS2-204ENST00000409286 MIA2Q96PC5 1412 aa28.5■■■□□ 2.15
LIMS2-204ENST00000409286 PTPN23Q9H3S7 1636 aa28.49■■■□□ 2.15
LIMS2-204ENST00000409286 ARID3CA6NKF2 412 aa28.46■■■□□ 2.15
LIMS2-204ENST00000409286 PLB1Q6P1J6 1458 aa28.45■■■□□ 2.15
LIMS2-204ENST00000409286 PTPRKQ15262 1439 aa28.43■■■□□ 2.14
LIMS2-204ENST00000409286 ZNF316A6NFI3 1004 aaPredicted RBP28.42■■■□□ 2.14
LIMS2-204ENST00000409286 HFM1A2PYH4 1435 aa28.4■■■□□ 2.14
LIMS2-204ENST00000409286 PRG4Q92954 1404 aaPredicted RBP28.4■■■□□ 2.14
LIMS2-204ENST00000409286 ABCA8O94911 1581 aa28.39■■■□□ 2.14
LIMS2-204ENST00000409286 TROQ12816 1431 aaPredicted RBP28.39■■■□□ 2.13
LIMS2-204ENST00000409286 SHROOM2Q13796 1616 aa28.36■■■□□ 2.13
LIMS2-204ENST00000409286 MAPKBP1O60336 1514 aa28.36■■■□□ 2.13
LIMS2-204ENST00000409286 PTPRGP23470 1445 aa28.32■■■□□ 2.12
LIMS2-204ENST00000409286 NAIPQ13075 1403 aa28.31■■■□□ 2.12
LIMS2-204ENST00000409286 AKNAQ7Z591 1439 aa28.28■■■□□ 2.12
LIMS2-204ENST00000409286 ADCY10Q96PN6 1610 aa28.27■■■□□ 2.12
LIMS2-204ENST00000409286 DIEXFQ68CQ4 756 aaKnown RBP28.26■■■□□ 2.12
LIMS2-204ENST00000409286 ATP10BO94823 1461 aa28.26■■■□□ 2.11
LIMS2-204ENST00000409286 PLEKHD1A6NEE1 506 aa28.24■■■□□ 2.11
LIMS2-204ENST00000409286 CLASP1Q7Z460 1538 aa28.22■■■□□ 2.11
LIMS2-204ENST00000409286 UACAQ9BZF9 1416 aa28.22■■■□□ 2.11
LIMS2-204ENST00000409286 TIMELESSQ9UNS1 1208 aa28.19■■■□□ 2.1
LIMS2-204ENST00000409286 GPATCH8Q9UKJ3 1502 aaKnown RBP28.18■■■□□ 2.1
LIMS2-204ENST00000409286 ITSN2Q9NZM3 1697 aa28.17■■■□□ 2.1
LIMS2-204ENST00000409286 ROCK1Q13464 1354 aa28.17■■■□□ 2.1
LIMS2-204ENST00000409286 DAPK1P53355 1430 aa28.16■■■□□ 2.1
LIMS2-204ENST00000409286 CHIC2Q9UKJ5 165 aa28.16■■■□□ 2.1
LIMS2-204ENST00000409286 ACIN1Q9UKV3 1341 aaKnown RBP28.16■■■□□ 2.1
LIMS2-204ENST00000409286 GCC2Q8IWJ2 1684 aa28.15■■■□□ 2.1
LIMS2-204ENST00000409286 CFDP1Q9UEE9 299 aaPredicted RBP28.15■■■□□ 2.1
LIMS2-204ENST00000409286 KIF14Q15058 1648 aa28.15■■■□□ 2.1
LIMS2-204ENST00000409286 DNMT1P26358 1616 aaKnown RBP28.14■■■□□ 2.1
LIMS2-204ENST00000409286 ABCC5O15440 1437 aa28.14■■■□□ 2.1
LIMS2-204ENST00000409286 RRP7BPQ9NSQ0 103 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms