RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 KIAA0586Q9BVV6 1533 aa34.86■■■■□ 3.17
C4orf48-201ENST00000409248 EEA1Q15075 1411 aa34.82■■■■□ 3.17
C4orf48-201ENST00000409248 CYB5RLQ6IPT4 315 aa34.81■■■■□ 3.16
C4orf48-201ENST00000409248 ERCC6L2Q5T890 1561 aa34.79■■■■□ 3.16
C4orf48-201ENST00000409248 JPH4Q96JJ6 628 aa34.76■■■■□ 3.16
C4orf48-201ENST00000409248 PRG4Q92954 1404 aaPredicted RBP34.75■■■■□ 3.15
C4orf48-201ENST00000409248 PRXQ9BXM0 1461 aa34.74■■■■□ 3.15
C4orf48-201ENST00000409248 IQGAP2Q13576 1575 aa34.73■■■■□ 3.15
C4orf48-201ENST00000409248 CSRNP3Q8WYN3 585 aa34.65■■■■□ 3.14
C4orf48-201ENST00000409248 CTTNBP2Q8WZ74 1663 aa34.65■■■■□ 3.14
C4orf48-201ENST00000409248 CARMIL2Q6F5E8 1435 aa34.52■■■■□ 3.12
C4orf48-201ENST00000409248 UGGT2Q9NYU1 1516 aa34.51■■■■□ 3.12
C4orf48-201ENST00000409248 FAM9AQ8IZU1 332 aaPredicted RBP34.49■■■■□ 3.11
C4orf48-201ENST00000409248 KIF21BO75037 1637 aa34.48■■■■□ 3.11
C4orf48-201ENST00000409248 DISP1Q96F81 1524 aa34.4■■■■□ 3.1
C4orf48-201ENST00000409248 KIAA0556O60303 1618 aa34.39■■■■□ 3.1
C4orf48-201ENST00000409248 TNIKQ9UKE5 1360 aa34.37■■■■□ 3.09
C4orf48-201ENST00000409248 GOLGA3Q08378 1498 aa34.34■■■■□ 3.09
C4orf48-201ENST00000409248 PTPRGP23470 1445 aa34.33■■■■□ 3.09
C4orf48-201ENST00000409248 ADCY10Q96PN6 1610 aa34.27■■■■□ 3.08
C4orf48-201ENST00000409248 TTBK1Q5TCY1 1321 aaPredicted RBP34.19■■■■□ 3.06
C4orf48-201ENST00000409248 SAMD9Q5K651 1589 aa34.15■■■■□ 3.06
C4orf48-201ENST00000409248 TRHP20396 242 aaPredicted RBP34.14■■■■□ 3.06
C4orf48-201ENST00000409248 NPM1P06748 294 aaKnown RBP eCLIP34.13■■■■□ 3.05
C4orf48-201ENST00000409248 UHRF1BP1LA0JNW5 1464 aa34.13■■■■□ 3.05
C4orf48-201ENST00000409248 UACAQ9BZF9 1416 aa34.12■■■■□ 3.05
C4orf48-201ENST00000409248 ABCC2Q92887 1545 aa34.11■■■■□ 3.05
C4orf48-201ENST00000409248 MAPKBP1O60336 1514 aa34.09■■■■□ 3.05
C4orf48-201ENST00000409248 UBTFP17480 764 aaKnown RBP34.05■■■■□ 3.04
C4orf48-201ENST00000409248 EFCAB5A4FU69 1503 aa34.04■■■■□ 3.04
C4orf48-201ENST00000409248 EHMT2Q96KQ7 1210 aa34.01■■■■□ 3.03
C4orf48-201ENST00000409248 ABCA8O94911 1581 aa33.98■■■■□ 3.03
C4orf48-201ENST00000409248 PLB1Q6P1J6 1458 aa33.98■■■■□ 3.03
C4orf48-201ENST00000409248 KDM5BQ9UGL1 1544 aa33.94■■■■□ 3.02
C4orf48-201ENST00000409248 RANGAP1P46060 587 aaPredicted RBP33.94■■■■□ 3.02
C4orf48-201ENST00000409248 P3H3Q8IVL6 736 aa33.94■■■■□ 3.02
C4orf48-201ENST00000409248 KIF13AQ9H1H9 1805 aa33.91■■■■□ 3.02
C4orf48-201ENST00000409248 ZCCHC11Q5TAX3 1644 aaKnown RBP33.91■■■■□ 3.02
C4orf48-201ENST00000409248 FHOD3Q2V2M9 1422 aa33.88■■■■□ 3.01
C4orf48-201ENST00000409248 ABCC10Q5T3U5 1492 aa33.88■■■■□ 3.01
C4orf48-201ENST00000409248 DIP2BQ9P265 1576 aa33.87■■■■□ 3.01
C4orf48-201ENST00000409248 RAPGEF6Q8TEU7 1601 aa33.84■■■■□ 3.01
C4orf48-201ENST00000409248 ASXL2Q76L83 1435 aa33.83■■■■□ 3.01
C4orf48-201ENST00000409248 ARHGAP35Q9NRY4 1499 aa33.76■■■■□ 3
C4orf48-201ENST00000409248 FAM69CQ0P6D2 419 aa33.74■■■□□ 2.99
C4orf48-201ENST00000409248 WDR7Q9Y4E6 1490 aa33.69■■■□□ 2.98
C4orf48-201ENST00000409248 FMN1Q68DA7 1419 aa33.69■■■□□ 2.98
C4orf48-201ENST00000409248 GLI2P10070 1586 aa33.68■■■□□ 2.98
C4orf48-201ENST00000409248 NUP153P49790 1475 aaKnown RBP33.66■■■□□ 2.98
C4orf48-201ENST00000409248 EPRSP07814 1512 aaKnown RBP33.64■■■□□ 2.98
C4orf48-201ENST00000409248 ATP10BO94823 1461 aa33.64■■■□□ 2.98
C4orf48-201ENST00000409248 ARID3CA6NKF2 412 aa33.58■■■□□ 2.97
C4orf48-201ENST00000409248 CLIP1P30622 1438 aa33.58■■■□□ 2.97
C4orf48-201ENST00000409248 HECW1Q76N89 1606 aa33.57■■■□□ 2.97
C4orf48-201ENST00000409248 TSPOAP1O95153 1857 aa33.56■■■□□ 2.96
C4orf48-201ENST00000409248 MAP3K4Q9Y6R4 1608 aa33.53■■■□□ 2.96
C4orf48-201ENST00000409248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.49■■■□□ 2.95
C4orf48-201ENST00000409248 HNRNPUL2Q1KMD3 747 aaKnown RBP33.49■■■□□ 2.95
C4orf48-201ENST00000409248 CFAP43Q8NDM7 1665 aa33.47■■■□□ 2.95
C4orf48-201ENST00000409248 PPRC1Q5VV67 1664 aaKnown RBP33.45■■■□□ 2.95
C4orf48-201ENST00000409248 LOC105371045A0A1W2PR82 267 aa33.44■■■□□ 2.94
C4orf48-201ENST00000409248 CEP162Q5TB80 1403 aa33.44■■■□□ 2.94
C4orf48-201ENST00000409248 PCF11O94913 1555 aaKnown RBP33.43■■■□□ 2.94
C4orf48-201ENST00000409248 CDK13Q14004 1512 aaKnown RBP33.43■■■□□ 2.94
C4orf48-201ENST00000409248 KCNH8Q96L42 1107 aa33.41■■■□□ 2.94
C4orf48-201ENST00000409248 TEX14Q8IWB6 1497 aa33.4■■■□□ 2.94
C4orf48-201ENST00000409248 CASKIN1Q8WXD9 1431 aa33.38■■■□□ 2.93
C4orf48-201ENST00000409248 ATP1B4Q9UN42 357 aaPredicted RBP33.38■■■□□ 2.93
C4orf48-201ENST00000409248 ABCA9Q8IUA7 1624 aa33.37■■■□□ 2.93
C4orf48-201ENST00000409248 FYCO1Q9BQS8 1478 aa33.37■■■□□ 2.93
C4orf48-201ENST00000409248 KDM6BO15054 1643 aa33.35■■■□□ 2.93
C4orf48-201ENST00000409248 PLEKHD1A6NEE1 506 aa33.34■■■□□ 2.93
C4orf48-201ENST00000409248 CD109Q6YHK3 1445 aa33.34■■■□□ 2.93
C4orf48-201ENST00000409248 CCDC18Q5T9S5 1454 aa33.32■■■□□ 2.92
C4orf48-201ENST00000409248 LRRIQ1Q96JM4 1722 aa33.32■■■□□ 2.92
C4orf48-201ENST00000409248 MAGI3Q5TCQ9 1506 aa33.32■■■□□ 2.92
C4orf48-201ENST00000409248 CDK11AQ9UQ88 783 aaPredicted RBP33.26■■■□□ 2.91
C4orf48-201ENST00000409248 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.18■■■□□ 2.9
C4orf48-201ENST00000409248 KIF14Q15058 1648 aa33.17■■■□□ 2.9
C4orf48-201ENST00000409248 TROQ12816 1431 aaPredicted RBP33.17■■■□□ 2.9
C4orf48-201ENST00000409248 TTC37Q6PGP7 1564 aa33.17■■■□□ 2.9
C4orf48-201ENST00000409248 CFAP74Q9C0B2 1584 aa33.09■■■□□ 2.89
C4orf48-201ENST00000409248 NEO1Q92859 1461 aa33.08■■■□□ 2.89
C4orf48-201ENST00000409248 PHLDB1Q86UU1 1377 aa33.08■■■□□ 2.89
C4orf48-201ENST00000409248 MYO5CQ9NQX4 1742 aa33.05■■■□□ 2.88
C4orf48-201ENST00000409248 VPS8Q8N3P4 1428 aa33.05■■■□□ 2.88
C4orf48-201ENST00000409248 COL17A1Q9UMD9 1497 aaPredicted RBP33.05■■■□□ 2.88
C4orf48-201ENST00000409248 ARAP3Q8WWN8 1544 aa33.02■■■□□ 2.88
C4orf48-201ENST00000409248 FANCAO15360 1455 aa32.99■■■□□ 2.87
C4orf48-201ENST00000409248 PLCH2O75038 1416 aa32.96■■■□□ 2.87
C4orf48-201ENST00000409248 EHBP1L1Q8N3D4 1523 aa32.92■■■□□ 2.86
C4orf48-201ENST00000409248 MTUS2Q5JR59 1369 aa32.92■■■□□ 2.86
C4orf48-201ENST00000409248 AKNAQ7Z591 1439 aa32.9■■■□□ 2.86
C4orf48-201ENST00000409248 PREX2Q70Z35 1606 aa32.9■■■□□ 2.86
C4orf48-201ENST00000409248 ARHGAP5Q13017 1502 aa32.88■■■□□ 2.85
C4orf48-201ENST00000409248 TIAM1Q13009 1591 aa32.87■■■□□ 2.85
C4orf48-201ENST00000409248 CDC42BPAQ5VT25 1732 aa32.83■■■□□ 2.85
C4orf48-201ENST00000409248 CDC42BPBQ9Y5S2 1711 aa32.83■■■□□ 2.85
C4orf48-201ENST00000409248 DENND4BO75064 1496 aaPredicted RBP32.83■■■□□ 2.85
C4orf48-201ENST00000409248 FRMPD1Q5SYB0 1578 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms