RNA–Protein interactions for RNA: ENST00000407936.5

POLR2F-203, Transcript of RNA polymerase II subunit F, humanhuman

TSL 3 BASIC

Gene POLR2F, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-203ENST00000407936 RIMBP3CA6NJZ7 1639 aa36.12■■■■□ 3.37
POLR2F-203ENST00000407936 RIMBP3BA6NNM3 1639 aa36.12■■■■□ 3.37
POLR2F-203ENST00000407936 RIMBP3Q9UFD9 1639 aa36.12■■■■□ 3.37
POLR2F-203ENST00000407936 JPH4Q96JJ6 628 aa36.11■■■■□ 3.37
POLR2F-203ENST00000407936 SHROOM2Q13796 1616 aa36.04■■■■□ 3.36
POLR2F-203ENST00000407936 PRG4Q92954 1404 aaPredicted RBP35.97■■■■□ 3.35
POLR2F-203ENST00000407936 ARAP1Q96P48 1450 aa35.92■■■■□ 3.34
POLR2F-203ENST00000407936 IQGAP2Q13576 1575 aa35.92■■■■□ 3.34
POLR2F-203ENST00000407936 CYB5RLQ6IPT4 315 aa35.91■■■■□ 3.34
POLR2F-203ENST00000407936 KIF21BO75037 1637 aa35.89■■■■□ 3.34
POLR2F-203ENST00000407936 ERCC6L2Q5T890 1561 aa35.88■■■■□ 3.33
POLR2F-203ENST00000407936 CTTNBP2Q8WZ74 1663 aa35.78■■■■□ 3.32
POLR2F-203ENST00000407936 CARMIL2Q6F5E8 1435 aa35.78■■■■□ 3.32
POLR2F-203ENST00000407936 UGGT2Q9NYU1 1516 aa35.78■■■■□ 3.32
POLR2F-203ENST00000407936 GOLGA3Q08378 1498 aa35.75■■■■□ 3.31
POLR2F-203ENST00000407936 UBTFP17480 764 aaKnown RBP35.69■■■■□ 3.3
POLR2F-203ENST00000407936 DISP1Q96F81 1524 aa35.67■■■■□ 3.3
POLR2F-203ENST00000407936 EHMT2Q96KQ7 1210 aa35.67■■■■□ 3.3
POLR2F-203ENST00000407936 TNIKQ9UKE5 1360 aa35.65■■■■□ 3.3
POLR2F-203ENST00000407936 PTPRGP23470 1445 aa35.6■■■■□ 3.29
POLR2F-203ENST00000407936 KIAA0556O60303 1618 aa35.57■■■■□ 3.29
POLR2F-203ENST00000407936 TTBK1Q5TCY1 1321 aaPredicted RBP35.5■■■■□ 3.27
POLR2F-203ENST00000407936 RANGAP1P46060 587 aaPredicted RBP35.46■■■■□ 3.27
POLR2F-203ENST00000407936 P3H3Q8IVL6 736 aa35.42■■■■□ 3.26
POLR2F-203ENST00000407936 SAMD9Q5K651 1589 aa35.42■■■■□ 3.26
POLR2F-203ENST00000407936 UACAQ9BZF9 1416 aa35.36■■■■□ 3.25
POLR2F-203ENST00000407936 EFCAB5A4FU69 1503 aa35.36■■■■□ 3.25
POLR2F-203ENST00000407936 NPM1P06748 294 aaKnown RBP eCLIP35.32■■■■□ 3.24
POLR2F-203ENST00000407936 UHRF1BP1LA0JNW5 1464 aa35.3■■■■□ 3.24
POLR2F-203ENST00000407936 ADCY10Q96PN6 1610 aa35.29■■■■□ 3.24
POLR2F-203ENST00000407936 FHOD3Q2V2M9 1422 aa35.27■■■■□ 3.24
POLR2F-203ENST00000407936 ABCC2Q92887 1545 aa35.25■■■■□ 3.23
POLR2F-203ENST00000407936 PLB1Q6P1J6 1458 aa35.23■■■■□ 3.23
POLR2F-203ENST00000407936 ARHGAP35Q9NRY4 1499 aa35.22■■■■□ 3.23
POLR2F-203ENST00000407936 LOC105371045A0A1W2PR82 267 aa35.22■■■■□ 3.23
POLR2F-203ENST00000407936 ABCA8O94911 1581 aa35.19■■■■□ 3.22
POLR2F-203ENST00000407936 KDM5BQ9UGL1 1544 aa35.12■■■■□ 3.21
POLR2F-203ENST00000407936 CLIP1P30622 1438 aa35.12■■■■□ 3.21
POLR2F-203ENST00000407936 TRHP20396 242 aaPredicted RBP35.09■■■■□ 3.21
POLR2F-203ENST00000407936 MAPKBP1O60336 1514 aa35.08■■■■□ 3.21
POLR2F-203ENST00000407936 FMN1Q68DA7 1419 aa35.07■■■■□ 3.21
POLR2F-203ENST00000407936 RAPGEF6Q8TEU7 1601 aa35.03■■■■□ 3.2
POLR2F-203ENST00000407936 CEP162Q5TB80 1403 aa35.02■■■■□ 3.2
POLR2F-203ENST00000407936 ASXL2Q76L83 1435 aa34.97■■■■□ 3.19
POLR2F-203ENST00000407936 ZCCHC11Q5TAX3 1644 aaKnown RBP34.96■■■■□ 3.19
POLR2F-203ENST00000407936 ATP10BO94823 1461 aa34.95■■■■□ 3.19
POLR2F-203ENST00000407936 NUP153P49790 1475 aaKnown RBP34.94■■■■□ 3.18
POLR2F-203ENST00000407936 ABCC10Q5T3U5 1492 aa34.92■■■■□ 3.18
POLR2F-203ENST00000407936 ARID3CA6NKF2 412 aa34.92■■■■□ 3.18
POLR2F-203ENST00000407936 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.86■■■■□ 3.17
POLR2F-203ENST00000407936 FAM69CQ0P6D2 419 aa34.86■■■■□ 3.17
POLR2F-203ENST00000407936 HNRNPUL2Q1KMD3 747 aaKnown RBP34.86■■■■□ 3.17
POLR2F-203ENST00000407936 ATP1B4Q9UN42 357 aaPredicted RBP34.85■■■■□ 3.17
POLR2F-203ENST00000407936 WDR7Q9Y4E6 1490 aa34.83■■■■□ 3.17
POLR2F-203ENST00000407936 CASKIN1Q8WXD9 1431 aa34.81■■■■□ 3.16
POLR2F-203ENST00000407936 DIP2BQ9P265 1576 aa34.8■■■■□ 3.16
POLR2F-203ENST00000407936 HECW1Q76N89 1606 aa34.8■■■■□ 3.16
POLR2F-203ENST00000407936 EPRSP07814 1512 aaKnown RBP34.76■■■■□ 3.15
POLR2F-203ENST00000407936 PLEKHD1A6NEE1 506 aa34.73■■■■□ 3.15
POLR2F-203ENST00000407936 FYCO1Q9BQS8 1478 aa34.71■■■■□ 3.15
POLR2F-203ENST00000407936 PCF11O94913 1555 aaKnown RBP34.71■■■■□ 3.15
POLR2F-203ENST00000407936 KCNH8Q96L42 1107 aa34.71■■■■□ 3.15
POLR2F-203ENST00000407936 KIF13AQ9H1H9 1805 aa34.71■■■■□ 3.15
POLR2F-203ENST00000407936 GLI2P10070 1586 aa34.7■■■■□ 3.15
POLR2F-203ENST00000407936 CDK13Q14004 1512 aaKnown RBP34.7■■■■□ 3.14
POLR2F-203ENST00000407936 CDK11AQ9UQ88 783 aaPredicted RBP34.67■■■■□ 3.14
POLR2F-203ENST00000407936 CCDC18Q5T9S5 1454 aa34.65■■■■□ 3.14
POLR2F-203ENST00000407936 VPS8Q8N3P4 1428 aa34.59■■■■□ 3.13
POLR2F-203ENST00000407936 CD109Q6YHK3 1445 aa34.51■■■■□ 3.12
POLR2F-203ENST00000407936 LRRIQ1Q96JM4 1722 aa34.51■■■■□ 3.12
POLR2F-203ENST00000407936 MAP3K4Q9Y6R4 1608 aa34.5■■■■□ 3.11
POLR2F-203ENST00000407936 TROQ12816 1431 aaPredicted RBP34.49■■■■□ 3.11
POLR2F-203ENST00000407936 ABCA9Q8IUA7 1624 aa34.44■■■■□ 3.1
POLR2F-203ENST00000407936 CFAP43Q8NDM7 1665 aa34.44■■■■□ 3.1
POLR2F-203ENST00000407936 MAGI3Q5TCQ9 1506 aa34.42■■■■□ 3.1
POLR2F-203ENST00000407936 TEX14Q8IWB6 1497 aa34.41■■■■□ 3.1
POLR2F-203ENST00000407936 TSPOAP1O95153 1857 aa34.39■■■■□ 3.1
POLR2F-203ENST00000407936 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.37■■■■□ 3.099e-7■■■■■ 32.7
POLR2F-203ENST00000407936 PPRC1Q5VV67 1664 aaKnown RBP34.36■■■■□ 3.09
POLR2F-203ENST00000407936 MTUS2Q5JR59 1369 aa34.34■■■■□ 3.09
POLR2F-203ENST00000407936 KIF14Q15058 1648 aa34.33■■■■□ 3.09
POLR2F-203ENST00000407936 TTC37Q6PGP7 1564 aa34.28■■■■□ 3.08
POLR2F-203ENST00000407936 MAP3K1Q13233 1512 aa34.27■■■■□ 3.08
POLR2F-203ENST00000407936 APLP2Q06481 763 aa34.26■■■■□ 3.08
POLR2F-203ENST00000407936 TIAM1Q13009 1591 aa34.26■■■■□ 3.07
POLR2F-203ENST00000407936 PHLDB1Q86UU1 1377 aa34.24■■■■□ 3.07
POLR2F-203ENST00000407936 PLCH2O75038 1416 aa34.24■■■■□ 3.07
POLR2F-203ENST00000407936 EHBP1L1Q8N3D4 1523 aa34.23■■■■□ 3.07
POLR2F-203ENST00000407936 NEO1Q92859 1461 aa34.2■■■■□ 3.07
POLR2F-203ENST00000407936 KDM6BO15054 1643 aa34.18■■■■□ 3.06
POLR2F-203ENST00000407936 LRRC9Q6ZRR7 1453 aa34.16■■■■□ 3.06
POLR2F-203ENST00000407936 ARAP3Q8WWN8 1544 aa34.15■■■■□ 3.06
POLR2F-203ENST00000407936 FANCAO15360 1455 aa34.15■■■■□ 3.06
POLR2F-203ENST00000407936 EFCAB2Q5VUJ9 269 aa34.15■■■■□ 3.06
POLR2F-203ENST00000407936 COL17A1Q9UMD9 1497 aaPredicted RBP34.13■■■■□ 3.05
POLR2F-203ENST00000407936 KANK4Q5T7N3 995 aaPredicted RBP34.12■■■■□ 3.05
POLR2F-203ENST00000407936 AKNAQ7Z591 1439 aa34.1■■■■□ 3.05
POLR2F-203ENST00000407936 MYO5CQ9NQX4 1742 aa34.1■■■■□ 3.05
POLR2F-203ENST00000407936 CCNB3Q8WWL7 1395 aa34.09■■■■□ 3.05
POLR2F-203ENST00000407936 CFAP74Q9C0B2 1584 aa34.07■■■■□ 3.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms