RNA–Protein interactions for RNA: ENST00000407936.5

POLR2F-203, Transcript of RNA polymerase II subunit F, humanhuman

TSL 3 BASIC

Gene POLR2F, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2F-203ENST00000407936 NISCHQ9Y2I1 1504 aa52.29■■■■■ 5.96
POLR2F-203ENST00000407936 CCDC180Q9P1Z9 1646 aa46.28■■■■■ 5
POLR2F-203ENST00000407936 ABCC9O60706 1549 aa45.08■■■■■ 4.81
POLR2F-203ENST00000407936 DCAF8L2P0C7V8 631 aa43.63■■■■■ 4.57
POLR2F-203ENST00000407936 ZCCHC6Q5VYS8 1495 aaKnown RBP43.61■■■■■ 4.57
POLR2F-203ENST00000407936 NACADO15069 1562 aa43.53■■■■■ 4.56
POLR2F-203ENST00000407936 RB1CC1Q8TDY2 1594 aa43.48■■■■■ 4.55
POLR2F-203ENST00000407936 MYO15BQ96JP2 1530 aa43.39■■■■■ 4.54
POLR2F-203ENST00000407936 DCAF1Q9Y4B6 1507 aa43.3■■■■■ 4.52
POLR2F-203ENST00000407936 UNC13AQ9UPW8 1703 aa42.33■■■■■ 4.37
POLR2F-203ENST00000407936 SCRIBQ14160 1630 aa42.24■■■■■ 4.35
POLR2F-203ENST00000407936 PABPN1Q86U42 306 aaKnown RBP eCLIP42.22■■■■■ 4.35
POLR2F-203ENST00000407936 BICRAQ9NZM4 1560 aa42.12■■■■■ 4.33
POLR2F-203ENST00000407936 SHROOM4Q9ULL8 1493 aa41.79■■■■■ 4.28
POLR2F-203ENST00000407936 DNAJC5BQ9UF47 199 aa41.16■■■■■ 4.18
POLR2F-203ENST00000407936 EIF4G1Q04637 1599 aaKnown RBP41.01■■■■■ 4.16
POLR2F-203ENST00000407936 CC2D2AQ9P2K1 1620 aa40.75■■■■■ 4.11
POLR2F-203ENST00000407936 CECR2Q9BXF3 1484 aa40.69■■■■■ 4.1
POLR2F-203ENST00000407936 BAZ1AQ9NRL2 1556 aaPredicted RBP40.5■■■■■ 4.07
POLR2F-203ENST00000407936 SMARCA4P51532 1647 aa40.45■■■■■ 4.07
POLR2F-203ENST00000407936 MROH2BQ7Z745 1585 aa40.27■■■■■ 4.04
POLR2F-203ENST00000407936 ATAD2BQ9ULI0 1458 aa40.25■■■■■ 4.03
POLR2F-203ENST00000407936 NCAPD3P42695 1498 aa40.2■■■■■ 4.03
POLR2F-203ENST00000407936 SMARCA2P51531 1590 aa40.19■■■■■ 4.02
POLR2F-203ENST00000407936 PEG3Q9GZU2 1588 aa40.1■■■■■ 4.01
POLR2F-203ENST00000407936 HMGXB3Q12766 1538 aa39.98■■■■□ 3.99
POLR2F-203ENST00000407936 RSF1Q96T23 1441 aaPredicted RBP39.97■■■■□ 3.99
POLR2F-203ENST00000407936 BAZ1BQ9UIG0 1483 aaKnown RBP39.91■■■■□ 3.98
POLR2F-203ENST00000407936 WIZO95785 1651 aa39.8■■■■□ 3.96
POLR2F-203ENST00000407936 TOP2AP11388 1531 aaKnown RBP39.45■■■■□ 3.91
POLR2F-203ENST00000407936 SUPT5HO00267 1087 aaKnown RBP39.18■■■■□ 3.86
POLR2F-203ENST00000407936 NESP48681 1621 aa39.07■■■■□ 3.84
POLR2F-203ENST00000407936 CADPSQ9ULU8 1353 aa39.06■■■■□ 3.84
POLR2F-203ENST00000407936 LAMC3Q9Y6N6 1575 aa39.04■■■■□ 3.84
POLR2F-203ENST00000407936 CCDC88BA6NC98 1476 aa39.02■■■■□ 3.84
POLR2F-203ENST00000407936 CFTRP13569 1480 aa38.86■■■■□ 3.81
POLR2F-203ENST00000407936 ERCC6Q03468 1493 aa38.86■■■■□ 3.81
POLR2F-203ENST00000407936 PDS5BQ9NTI5 1447 aa38.83■■■■□ 3.81
POLR2F-203ENST00000407936 FANCD2Q9BXW9 1451 aa38.57■■■■□ 3.76
POLR2F-203ENST00000407936 KIF21AQ7Z4S6 1674 aa38.52■■■■□ 3.76
POLR2F-203ENST00000407936 CEP164Q9UPV0 1460 aa38.49■■■■□ 3.75
POLR2F-203ENST00000407936 PRDM2Q13029 1718 aa38.4■■■■□ 3.74
POLR2F-203ENST00000407936 THOC2Q8NI27 1593 aaKnown RBP38.39■■■■□ 3.74
POLR2F-203ENST00000407936 MRC2Q9UBG0 1479 aa38.38■■■■□ 3.73
POLR2F-203ENST00000407936 CUX2O14529 1486 aa38.36■■■■□ 3.73
POLR2F-203ENST00000407936 WDR62O43379 1518 aa38.22■■■■□ 3.71
POLR2F-203ENST00000407936 URB2Q14146 1524 aaKnown RBP38.13■■■■□ 3.69
POLR2F-203ENST00000407936 ABCC8Q09428 1581 aa38.03■■■■□ 3.68
POLR2F-203ENST00000407936 TOPBP1Q92547 1522 aa37.97■■■■□ 3.67
POLR2F-203ENST00000407936 DNMBPQ6XZF7 1577 aa37.93■■■■□ 3.66
POLR2F-203ENST00000407936 CUX1P39880 1505 aa37.77■■■■□ 3.64
POLR2F-203ENST00000407936 IFT140Q96RY7 1462 aa37.69■■■■□ 3.62
POLR2F-203ENST00000407936 WRNQ14191 1432 aaPredicted RBP eCLIP37.69■■■■□ 3.62
POLR2F-203ENST00000407936 POLA1P09884 1462 aaPredicted RBP37.67■■■■□ 3.62
POLR2F-203ENST00000407936 FGD5Q6ZNL6 1462 aa37.61■■■■□ 3.61
POLR2F-203ENST00000407936 SOGA1O94964 1423 aa37.56■■■■□ 3.6
POLR2F-203ENST00000407936 TOP2BQ02880 1626 aa37.5■■■■□ 3.59
POLR2F-203ENST00000407936 RAD54L2Q9Y4B4 1467 aa37.5■■■■□ 3.59
POLR2F-203ENST00000407936 SYNJ1O43426 1573 aa37.48■■■■□ 3.59
POLR2F-203ENST00000407936 TARBP1Q13395 1621 aaKnown RBP37.47■■■■□ 3.59
POLR2F-203ENST00000407936 BIVM-ERCC5R4GMW8 1640 aa37.47■■■■□ 3.59
POLR2F-203ENST00000407936 ZNF608Q9ULD9 1512 aaPredicted RBP37.45■■■■□ 3.59
POLR2F-203ENST00000407936 AQRO60306 1485 aaKnown RBP eCLIP37.31■■■■□ 3.565e-7■■■■■ 39.8
POLR2F-203ENST00000407936 TDRD9Q8NDG6 1382 aaKnown RBP37.3■■■■□ 3.56
POLR2F-203ENST00000407936 ABCA10Q8WWZ4 1543 aa37.29■■■■□ 3.56
POLR2F-203ENST00000407936 EIF4G3O43432 1585 aaKnown RBP37.26■■■■□ 3.56
POLR2F-203ENST00000407936 WDR97A6NE52 1622 aa37.25■■■■□ 3.55
POLR2F-203ENST00000407936 GAPVD1Q14C86 1478 aa37.11■■■■□ 3.53
POLR2F-203ENST00000407936 GRIN2BQ13224 1484 aa37.07■■■■□ 3.53
POLR2F-203ENST00000407936 ABCA5Q8WWZ7 1642 aa37.03■■■■□ 3.52
POLR2F-203ENST00000407936 TRIM41Q8WV44 630 aa37.03■■■■□ 3.52
POLR2F-203ENST00000407936 SNAPC4Q5SXM2 1469 aa36.95■■■■□ 3.51
POLR2F-203ENST00000407936 MAGI1Q96QZ7 1491 aaPredicted RBP36.94■■■■□ 3.5
POLR2F-203ENST00000407936 DNAJC5Q9H3Z4 198 aa36.9■■■■□ 3.5
POLR2F-203ENST00000407936 KIF27Q86VH2 1401 aa36.89■■■■□ 3.5
POLR2F-203ENST00000407936 OSCARQ8IYS5 282 aa36.88■■■■□ 3.49
POLR2F-203ENST00000407936 PBRM1Q86U86 1689 aa36.87■■■■□ 3.49
POLR2F-203ENST00000407936 FBLN2P98095 1184 aa36.84■■■■□ 3.49
POLR2F-203ENST00000407936 ERICH3Q5RHP9 1530 aa36.84■■■■□ 3.49
POLR2F-203ENST00000407936 CHMP7Q8WUX9 453 aaPredicted RBP36.81■■■■□ 3.48
POLR2F-203ENST00000407936 SYNJ2O15056 1496 aa36.79■■■■□ 3.48
POLR2F-203ENST00000407936 CHIC1Q5VXU3 224 aa36.75■■■■□ 3.47
POLR2F-203ENST00000407936 IGF1RP08069 1367 aa36.72■■■■□ 3.47
POLR2F-203ENST00000407936 FHAD1B1AJZ9 1412 aa36.71■■■■□ 3.47
POLR2F-203ENST00000407936 CHD1O14646 1710 aa36.68■■■■□ 3.46
POLR2F-203ENST00000407936 ADAMTS12P58397 1594 aa36.67■■■■□ 3.46
POLR2F-203ENST00000407936 RUSC2Q8N2Y8 1516 aa36.58■■■■□ 3.45
POLR2F-203ENST00000407936 GRIN2AQ12879 1464 aa36.57■■■■□ 3.45
POLR2F-203ENST00000407936 CARMIL1Q5VZK9 1371 aa36.51■■■■□ 3.43
POLR2F-203ENST00000407936 CUL7Q14999 1698 aa36.5■■■■□ 3.43
POLR2F-203ENST00000407936 NUP160Q12769 1436 aa36.42■■■■□ 3.42
POLR2F-203ENST00000407936 EEA1Q15075 1411 aa36.39■■■■□ 3.42
POLR2F-203ENST00000407936 CLASP1Q7Z460 1538 aa36.39■■■■□ 3.42
POLR2F-203ENST00000407936 CEP170Q5SW79 1584 aa36.33■■■■□ 3.41
POLR2F-203ENST00000407936 CSRNP3Q8WYN3 585 aa36.32■■■■□ 3.4
POLR2F-203ENST00000407936 RAPGEF2Q9Y4G8 1499 aa36.3■■■■□ 3.4
POLR2F-203ENST00000407936 PRXQ9BXM0 1461 aa36.24■■■■□ 3.39
POLR2F-203ENST00000407936 FAM9AQ8IZU1 332 aaPredicted RBP36.2■■■■□ 3.39
POLR2F-203ENST00000407936 ARHGEF11O15085 1522 aa36.19■■■■□ 3.38
POLR2F-203ENST00000407936 KIAA0586Q9BVV6 1533 aa36.16■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms