RNA–Protein interactions for RNA: ENST00000406256.7

GDPD3-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDPD3, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-202ENST00000406256 EEA1Q15075 1411 aa26.75■■□□□ 1.87
GDPD3-202ENST00000406256 ERCC6L2Q5T890 1561 aa26.73■■□□□ 1.87
GDPD3-202ENST00000406256 KIAA0586Q9BVV6 1533 aa26.71■■□□□ 1.87
GDPD3-202ENST00000406256 ARAP1Q96P48 1450 aa26.7■■□□□ 1.86
GDPD3-202ENST00000406256 CSRNP3Q8WYN3 585 aa26.67■■□□□ 1.86
GDPD3-202ENST00000406256 CTTNBP2Q8WZ74 1663 aa26.63■■□□□ 1.85
GDPD3-202ENST00000406256 IQGAP2Q13576 1575 aa26.61■■□□□ 1.85
GDPD3-202ENST00000406256 JPH4Q96JJ6 628 aa26.58■■□□□ 1.85
GDPD3-202ENST00000406256 KIF21BO75037 1637 aa26.58■■□□□ 1.85
GDPD3-202ENST00000406256 FAM9AQ8IZU1 332 aaPredicted RBP26.58■■□□□ 1.84
GDPD3-202ENST00000406256 PRG4Q92954 1404 aaPredicted RBP26.57■■□□□ 1.84
GDPD3-202ENST00000406256 UGGT2Q9NYU1 1516 aa26.49■■□□□ 1.83
GDPD3-202ENST00000406256 CYB5RLQ6IPT4 315 aa26.48■■□□□ 1.83
GDPD3-202ENST00000406256 DISP1Q96F81 1524 aa26.45■■□□□ 1.83
GDPD3-202ENST00000406256 KIAA0556O60303 1618 aa26.4■■□□□ 1.82
GDPD3-202ENST00000406256 GOLGA3Q08378 1498 aa26.34■■□□□ 1.81
GDPD3-202ENST00000406256 CARMIL2Q6F5E8 1435 aa26.33■■□□□ 1.8
GDPD3-202ENST00000406256 SAMD9Q5K651 1589 aa26.3■■□□□ 1.8
GDPD3-202ENST00000406256 TNIKQ9UKE5 1360 aa26.28■■□□□ 1.8
GDPD3-202ENST00000406256 ADCY10Q96PN6 1610 aa26.26■■□□□ 1.79
GDPD3-202ENST00000406256 PTPRGP23470 1445 aa26.23■■□□□ 1.79
GDPD3-202ENST00000406256 EHMT2Q96KQ7 1210 aa26.2■■□□□ 1.78
GDPD3-202ENST00000406256 UHRF1BP1LA0JNW5 1464 aa26.12■■□□□ 1.77
GDPD3-202ENST00000406256 UBTFP17480 764 aaKnown RBP26.12■■□□□ 1.77
GDPD3-202ENST00000406256 EFCAB5A4FU69 1503 aa26.12■■□□□ 1.77
GDPD3-202ENST00000406256 ABCC2Q92887 1545 aa26.11■■□□□ 1.77
GDPD3-202ENST00000406256 ABCA8O94911 1581 aa26.1■■□□□ 1.77
GDPD3-202ENST00000406256 TTBK1Q5TCY1 1321 aaPredicted RBP26.1■■□□□ 1.77
GDPD3-202ENST00000406256 UACAQ9BZF9 1416 aa26.09■■□□□ 1.77
GDPD3-202ENST00000406256 PLB1Q6P1J6 1458 aa26.08■■□□□ 1.77
GDPD3-202ENST00000406256 FHOD3Q2V2M9 1422 aa26.06■■□□□ 1.76
GDPD3-202ENST00000406256 P3H3Q8IVL6 736 aa26.06■■□□□ 1.76
GDPD3-202ENST00000406256 ARHGAP35Q9NRY4 1499 aa26.05■■□□□ 1.76
GDPD3-202ENST00000406256 RANGAP1P46060 587 aaPredicted RBP26.03■■□□□ 1.76
GDPD3-202ENST00000406256 MAPKBP1O60336 1514 aa26.03■■□□□ 1.76
GDPD3-202ENST00000406256 KDM5BQ9UGL1 1544 aa26.01■■□□□ 1.75
GDPD3-202ENST00000406256 ZCCHC11Q5TAX3 1644 aaKnown RBP25.99■■□□□ 1.75
GDPD3-202ENST00000406256 KIF13AQ9H1H9 1805 aa25.97■■□□□ 1.75
GDPD3-202ENST00000406256 RAPGEF6Q8TEU7 1601 aa25.97■■□□□ 1.75
GDPD3-202ENST00000406256 DIP2BQ9P265 1576 aa25.88■■□□□ 1.73
GDPD3-202ENST00000406256 NUP153P49790 1475 aaKnown RBP25.88■■□□□ 1.73
GDPD3-202ENST00000406256 LOC105371045A0A1W2PR82 267 aa25.87■■□□□ 1.73
GDPD3-202ENST00000406256 NPM1P06748 294 aaKnown RBP eCLIP25.87■■□□□ 1.73
GDPD3-202ENST00000406256 ABCC10Q5T3U5 1492 aa25.86■■□□□ 1.73
GDPD3-202ENST00000406256 CLIP1P30622 1438 aa25.85■■□□□ 1.73
GDPD3-202ENST00000406256 ASXL2Q76L83 1435 aa25.85■■□□□ 1.73
GDPD3-202ENST00000406256 ATP10BO94823 1461 aa25.83■■□□□ 1.73
GDPD3-202ENST00000406256 TRHP20396 242 aaPredicted RBP25.82■■□□□ 1.72
GDPD3-202ENST00000406256 FMN1Q68DA7 1419 aa25.81■■□□□ 1.72
GDPD3-202ENST00000406256 CEP162Q5TB80 1403 aa25.8■■□□□ 1.72
GDPD3-202ENST00000406256 LRRIQ1Q96JM4 1722 aa25.79■■□□□ 1.72
GDPD3-202ENST00000406256 PCF11O94913 1555 aaKnown RBP25.75■■□□□ 1.71
GDPD3-202ENST00000406256 WDR7Q9Y4E6 1490 aa25.75■■□□□ 1.71
GDPD3-202ENST00000406256 GLI2P10070 1586 aa25.75■■□□□ 1.71
GDPD3-202ENST00000406256 HECW1Q76N89 1606 aa25.74■■□□□ 1.71
GDPD3-202ENST00000406256 EPRSP07814 1512 aaKnown RBP25.74■■□□□ 1.71
GDPD3-202ENST00000406256 ARID3CA6NKF2 412 aa25.72■■□□□ 1.71
GDPD3-202ENST00000406256 CDK13Q14004 1512 aaKnown RBP25.71■■□□□ 1.71
GDPD3-202ENST00000406256 FAM69CQ0P6D2 419 aa25.69■■□□□ 1.7
GDPD3-202ENST00000406256 PPRC1Q5VV67 1664 aaKnown RBP25.68■■□□□ 1.7
GDPD3-202ENST00000406256 CASKIN1Q8WXD9 1431 aa25.68■■□□□ 1.7
GDPD3-202ENST00000406256 MAP3K4Q9Y6R4 1608 aa25.67■■□□□ 1.7
GDPD3-202ENST00000406256 TSPOAP1O95153 1857 aa25.66■■□□□ 1.7
GDPD3-202ENST00000406256 FYCO1Q9BQS8 1478 aa25.63■■□□□ 1.69
GDPD3-202ENST00000406256 CFAP43Q8NDM7 1665 aa25.59■■□□□ 1.69
GDPD3-202ENST00000406256 ABCA9Q8IUA7 1624 aa25.57■■□□□ 1.68
GDPD3-202ENST00000406256 CCDC18Q5T9S5 1454 aa25.54■■□□□ 1.68
GDPD3-202ENST00000406256 MAGI3Q5TCQ9 1506 aa25.52■■□□□ 1.68
GDPD3-202ENST00000406256 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.52■■□□□ 1.68
GDPD3-202ENST00000406256 HNRNPUL2Q1KMD3 747 aaKnown RBP25.52■■□□□ 1.68
GDPD3-202ENST00000406256 KCNH8Q96L42 1107 aa25.52■■□□□ 1.68
GDPD3-202ENST00000406256 ATP1B4Q9UN42 357 aaPredicted RBP25.51■■□□□ 1.67
GDPD3-202ENST00000406256 VPS8Q8N3P4 1428 aa25.48■■□□□ 1.67
GDPD3-202ENST00000406256 TTC37Q6PGP7 1564 aa25.48■■□□□ 1.67
GDPD3-202ENST00000406256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.48■■□□□ 1.67
GDPD3-202ENST00000406256 KIF14Q15058 1648 aa25.47■■□□□ 1.67
GDPD3-202ENST00000406256 PLEKHD1A6NEE1 506 aa25.46■■□□□ 1.67
GDPD3-202ENST00000406256 CD109Q6YHK3 1445 aa25.45■■□□□ 1.67
GDPD3-202ENST00000406256 TROQ12816 1431 aaPredicted RBP25.45■■□□□ 1.66
GDPD3-202ENST00000406256 TEX14Q8IWB6 1497 aa25.38■■□□□ 1.65
GDPD3-202ENST00000406256 KDM6BO15054 1643 aa25.36■■□□□ 1.65
GDPD3-202ENST00000406256 COL17A1Q9UMD9 1497 aaPredicted RBP25.35■■□□□ 1.65
GDPD3-202ENST00000406256 CDK11AQ9UQ88 783 aaPredicted RBP25.35■■□□□ 1.65
GDPD3-202ENST00000406256 TIAM1Q13009 1591 aa25.35■■□□□ 1.65
GDPD3-202ENST00000406256 MYO5CQ9NQX4 1742 aa25.34■■□□□ 1.65
GDPD3-202ENST00000406256 CDC42BPBQ9Y5S2 1711 aa25.29■■□□□ 1.64
GDPD3-202ENST00000406256 EHBP1L1Q8N3D4 1523 aa25.29■■□□□ 1.64
GDPD3-202ENST00000406256 CDC42BPAQ5VT25 1732 aa25.28■■□□□ 1.64
GDPD3-202ENST00000406256 MAP3K1Q13233 1512 aa25.27■■□□□ 1.64
GDPD3-202ENST00000406256 ARAP3Q8WWN8 1544 aa25.27■■□□□ 1.64
GDPD3-202ENST00000406256 NEO1Q92859 1461 aa25.27■■□□□ 1.64
GDPD3-202ENST00000406256 PLCH2O75038 1416 aa25.26■■□□□ 1.63
GDPD3-202ENST00000406256 PREX2Q70Z35 1606 aa25.26■■□□□ 1.63
GDPD3-202ENST00000406256 CFAP74Q9C0B2 1584 aa25.24■■□□□ 1.63
GDPD3-202ENST00000406256 FANCAO15360 1455 aa25.22■■□□□ 1.63
GDPD3-202ENST00000406256 MTUS2Q5JR59 1369 aa25.22■■□□□ 1.63
GDPD3-202ENST00000406256 LRRC9Q6ZRR7 1453 aa25.2■■□□□ 1.62
GDPD3-202ENST00000406256 FRMPD1Q5SYB0 1578 aa25.19■■□□□ 1.62
GDPD3-202ENST00000406256 PHLDB1Q86UU1 1377 aa25.18■■□□□ 1.62
GDPD3-202ENST00000406256 AKNAQ7Z591 1439 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms