RNA–Protein interactions for RNA: ENST00000402394.5

CGREF1-203, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CGREF1, Length 1,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-203ENST00000402394 EFCAB5A4FU69 1503 aa39.91■■■■□ 3.98
CGREF1-203ENST00000402394 FHAD1B1AJZ9 1412 aa39.89■■■■□ 3.98
CGREF1-203ENST00000402394 TIAM1Q13009 1591 aa39.85■■■■□ 3.97
CGREF1-203ENST00000402394 RRBP1Q9P2E9 1410 aaKnown RBP39.83■■■■□ 3.97
CGREF1-203ENST00000402394 ERCC6Q03468 1493 aa39.83■■■■□ 3.97
CGREF1-203ENST00000402394 PCF11O94913 1555 aaKnown RBP39.75■■■■□ 3.95
CGREF1-203ENST00000402394 FHOD3Q2V2M9 1422 aa39.73■■■■□ 3.95
CGREF1-203ENST00000402394 PBRM1Q86U86 1689 aa39.69■■■■□ 3.94
CGREF1-203ENST00000402394 CFAP43Q8NDM7 1665 aa39.69■■■■□ 3.94
CGREF1-203ENST00000402394 WDR62O43379 1518 aa39.69■■■■□ 3.94
CGREF1-203ENST00000402394 AQRO60306 1485 aaKnown RBP eCLIP39.69■■■■□ 3.94
CGREF1-203ENST00000402394 P3H3Q8IVL6 736 aa39.68■■■■□ 3.94
CGREF1-203ENST00000402394 LRRC9Q6ZRR7 1453 aa39.67■■■■□ 3.94
CGREF1-203ENST00000402394 FYCO1Q9BQS8 1478 aa39.66■■■■□ 3.94
CGREF1-203ENST00000402394 CASKIN1Q8WXD9 1431 aa39.63■■■■□ 3.94
CGREF1-203ENST00000402394 SAMD9Q5K651 1589 aa39.63■■■■□ 3.93
CGREF1-203ENST00000402394 CCNB3Q8WWL7 1395 aa39.62■■■■□ 3.93
CGREF1-203ENST00000402394 IFT140Q96RY7 1462 aa39.6■■■■□ 3.93
CGREF1-203ENST00000402394 FMN1Q68DA7 1419 aa39.58■■■■□ 3.93
CGREF1-203ENST00000402394 ADAMTS12P58397 1594 aa39.56■■■■□ 3.92
CGREF1-203ENST00000402394 GRIN2BQ13224 1484 aa39.53■■■■□ 3.92
CGREF1-203ENST00000402394 THOC2Q8NI27 1593 aaKnown RBP39.53■■■■□ 3.92
CGREF1-203ENST00000402394 SNAPC4Q5SXM2 1469 aa39.48■■■■□ 3.91
CGREF1-203ENST00000402394 ZNF608Q9ULD9 1512 aaPredicted RBP39.42■■■■□ 3.9
CGREF1-203ENST00000402394 PHLDB1Q86UU1 1377 aa39.4■■■■□ 3.9
CGREF1-203ENST00000402394 ATP1B4Q9UN42 357 aaPredicted RBP39.38■■■■□ 3.9
CGREF1-203ENST00000402394 IQGAP2Q13576 1575 aa39.33■■■■□ 3.89
CGREF1-203ENST00000402394 CLSPNQ9HAW4 1339 aa39.31■■■■□ 3.88
CGREF1-203ENST00000402394 DHX57Q6P158 1386 aaKnown RBP39.3■■■■□ 3.88
CGREF1-203ENST00000402394 EIF4G3O43432 1585 aaKnown RBP39.26■■■■□ 3.88
CGREF1-203ENST00000402394 LRRIQ1Q96JM4 1722 aa39.22■■■■□ 3.87
CGREF1-203ENST00000402394 UGGT2Q9NYU1 1516 aa39.17■■■■□ 3.86
CGREF1-203ENST00000402394 ITGAEP38570 1179 aa39.15■■■■□ 3.86
CGREF1-203ENST00000402394 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.15■■■■□ 3.86
CGREF1-203ENST00000402394 MTUS2Q5JR59 1369 aa39.11■■■■□ 3.85
CGREF1-203ENST00000402394 KIAA0586Q9BVV6 1533 aa39.1■■■■□ 3.85
CGREF1-203ENST00000402394 GRIN2AQ12879 1464 aa39.09■■■■□ 3.85
CGREF1-203ENST00000402394 CCDC18Q5T9S5 1454 aa39.07■■■■□ 3.84
CGREF1-203ENST00000402394 MAGI1Q96QZ7 1491 aaPredicted RBP39.07■■■■□ 3.84
CGREF1-203ENST00000402394 FAM50AQ14320 339 aaKnown RBP39.06■■■■□ 3.84
CGREF1-203ENST00000402394 HECW1Q76N89 1606 aa39.04■■■■□ 3.84
CGREF1-203ENST00000402394 RAB3GAP2Q9H2M9 1393 aa39.04■■■■□ 3.84
CGREF1-203ENST00000402394 EHBP1L1Q8N3D4 1523 aa39.04■■■■□ 3.84
CGREF1-203ENST00000402394 FGD6Q6ZV73 1430 aa39.02■■■■□ 3.84
CGREF1-203ENST00000402394 SETD5Q9C0A6 1442 aa39.02■■■■□ 3.84
CGREF1-203ENST00000402394 ZNF316A6NFI3 1004 aaPredicted RBP39.01■■■■□ 3.84
CGREF1-203ENST00000402394 SUPT6HQ7KZ85 1726 aaKnown RBP38.97■■■■□ 3.83
CGREF1-203ENST00000402394 NCOA2Q15596 1464 aa38.97■■■■□ 3.83
CGREF1-203ENST00000402394 DIEXFQ68CQ4 756 aaKnown RBP38.95■■■■□ 3.83
CGREF1-203ENST00000402394 SYNJ2O15056 1496 aa38.94■■■■□ 3.82
CGREF1-203ENST00000402394 KIAA0556O60303 1618 aa38.93■■■■□ 3.82
CGREF1-203ENST00000402394 DISP1Q96F81 1524 aa38.92■■■■□ 3.82
CGREF1-203ENST00000402394 MAGI3Q5TCQ9 1506 aa38.91■■■■□ 3.82
CGREF1-203ENST00000402394 ARHGEF11O15085 1522 aa38.91■■■■□ 3.82
CGREF1-203ENST00000402394 EPRSP07814 1512 aaKnown RBP38.91■■■■□ 3.82
CGREF1-203ENST00000402394 MYOM3Q5VTT5 1437 aa38.9■■■■□ 3.82
CGREF1-203ENST00000402394 CEP170Q5SW79 1584 aa38.83■■■■□ 3.81
CGREF1-203ENST00000402394 CHMP7Q8WUX9 453 aaPredicted RBP38.81■■■■□ 3.8
CGREF1-203ENST00000402394 MAPKBP1O60336 1514 aa38.8■■■■□ 3.8
CGREF1-203ENST00000402394 CDK13Q14004 1512 aaKnown RBP38.77■■■■□ 3.8
CGREF1-203ENST00000402394 NUP160Q12769 1436 aa38.75■■■■□ 3.79
CGREF1-203ENST00000402394 PTPN23Q9H3S7 1636 aa38.71■■■■□ 3.79
CGREF1-203ENST00000402394 RAPGEF6Q8TEU7 1601 aa38.67■■■■□ 3.78
CGREF1-203ENST00000402394 PTPRKQ15262 1439 aa38.67■■■■□ 3.78
CGREF1-203ENST00000402394 TCOF1Q13428 1488 aaKnown RBP38.66■■■■□ 3.78
CGREF1-203ENST00000402394 NUP153P49790 1475 aaKnown RBP38.65■■■■□ 3.78
CGREF1-203ENST00000402394 HFM1A2PYH4 1435 aa38.63■■■■□ 3.78
CGREF1-203ENST00000402394 FBLN2P98095 1184 aa38.61■■■■□ 3.77
CGREF1-203ENST00000402394 MIA2Q96PC5 1412 aa38.57■■■■□ 3.77
CGREF1-203ENST00000402394 CARMIL2Q6F5E8 1435 aa38.54■■■■□ 3.76
CGREF1-203ENST00000402394 JPH4Q96JJ6 628 aa38.51■■■■□ 3.76
CGREF1-203ENST00000402394 ARID3CA6NKF2 412 aa38.51■■■■□ 3.76
CGREF1-203ENST00000402394 NAIPQ13075 1403 aa38.5■■■■□ 3.75
CGREF1-203ENST00000402394 CDK11AQ9UQ88 783 aaPredicted RBP38.43■■■■□ 3.74
CGREF1-203ENST00000402394 PLB1Q6P1J6 1458 aa38.43■■■■□ 3.74
CGREF1-203ENST00000402394 UACAQ9BZF9 1416 aa38.41■■■■□ 3.74
CGREF1-203ENST00000402394 AKNAQ7Z591 1439 aa38.4■■■■□ 3.74
CGREF1-203ENST00000402394 GCC2Q8IWJ2 1684 aa38.35■■■■□ 3.73
CGREF1-203ENST00000402394 TIMELESSQ9UNS1 1208 aa38.35■■■■□ 3.73
CGREF1-203ENST00000402394 TROQ12816 1431 aaPredicted RBP38.35■■■■□ 3.73
CGREF1-203ENST00000402394 SIN3AQ96ST3 1273 aa38.32■■■■□ 3.73
CGREF1-203ENST00000402394 ABCA8O94911 1581 aa38.3■■■■□ 3.72
CGREF1-203ENST00000402394 PRG4Q92954 1404 aaPredicted RBP38.28■■■■□ 3.72
CGREF1-203ENST00000402394 ADCY10Q96PN6 1610 aa38.26■■■■□ 3.72
CGREF1-203ENST00000402394 NEUROD1Q13562 356 aa38.23■■■■□ 3.71
CGREF1-203ENST00000402394 DNMT1P26358 1616 aaKnown RBP38.21■■■■□ 3.71
CGREF1-203ENST00000402394 CHD1O14646 1710 aa38.21■■■■□ 3.71
CGREF1-203ENST00000402394 RRP7BPQ9NSQ0 103 aa38.2■■■■□ 3.71
CGREF1-203ENST00000402394 CHIC2Q9UKJ5 165 aa38.2■■■■□ 3.71
CGREF1-203ENST00000402394 DAPK1P53355 1430 aa38.19■■■■□ 3.7
CGREF1-203ENST00000402394 MIER1Q8N108 512 aa38.18■■■■□ 3.7
CGREF1-203ENST00000402394 ITSN2Q9NZM3 1697 aa38.17■■■■□ 3.7
CGREF1-203ENST00000402394 ROCK1Q13464 1354 aa38.16■■■■□ 3.7
CGREF1-203ENST00000402394 KIF14Q15058 1648 aa38.14■■■■□ 3.7
CGREF1-203ENST00000402394 ABCC5O15440 1437 aa38.14■■■■□ 3.7
CGREF1-203ENST00000402394 GPATCH8Q9UKJ3 1502 aaKnown RBP38.12■■■■□ 3.69
CGREF1-203ENST00000402394 KDM6BO15054 1643 aa38.11■■■■□ 3.69
CGREF1-203ENST00000402394 ATP10BO94823 1461 aa38.1■■■■□ 3.69
CGREF1-203ENST00000402394 ZNF644Q9H582 1327 aaPredicted RBP38.09■■■■□ 3.69
CGREF1-203ENST00000402394 SHROOM2Q13796 1616 aa38.07■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms