RNA–Protein interactions for RNA: ENST00000398958.6

RCC1-204, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RCC1, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-204ENST00000398958 CARMIL1Q5VZK9 1371 aa16.89■□□□□ 0.3
RCC1-204ENST00000398958 PRXQ9BXM0 1461 aa16.88■□□□□ 0.29
RCC1-204ENST00000398958 MRC2Q9UBG0 1479 aa16.85■□□□□ 0.29
RCC1-204ENST00000398958 ARAP1Q96P48 1450 aa16.82■□□□□ 0.28
RCC1-204ENST00000398958 AQRO60306 1485 aaKnown RBP eCLIP16.81■□□□□ 0.284e-10■■■■■ 37.7
RCC1-204ENST00000398958 ABCA10Q8WWZ4 1543 aa16.79■□□□□ 0.28
RCC1-204ENST00000398958 ERICH3Q5RHP9 1530 aa16.75■□□□□ 0.27
RCC1-204ENST00000398958 YTHDC1Q96MU7 727 aaKnown RBP16.74■□□□□ 0.27
RCC1-204ENST00000398958 ZNF608Q9ULD9 1512 aaPredicted RBP16.74■□□□□ 0.27
RCC1-204ENST00000398958 TARBP1Q13395 1621 aaKnown RBP16.72■□□□□ 0.27
RCC1-204ENST00000398958 ZNF316A6NFI3 1004 aaPredicted RBP16.72■□□□□ 0.27
RCC1-204ENST00000398958 GAPVD1Q14C86 1478 aa16.72■□□□□ 0.27
RCC1-204ENST00000398958 ARHGAP35Q9NRY4 1499 aa16.72■□□□□ 0.27
RCC1-204ENST00000398958 FHOD3Q2V2M9 1422 aa16.71■□□□□ 0.27
RCC1-204ENST00000398958 WDR62O43379 1518 aa16.71■□□□□ 0.27
RCC1-204ENST00000398958 FAM50AQ14320 339 aaKnown RBP16.7■□□□□ 0.26
RCC1-204ENST00000398958 THOC2Q8NI27 1593 aaKnown RBP16.7■□□□□ 0.26
RCC1-204ENST00000398958 WDR97A6NE52 1622 aa16.69■□□□□ 0.26
RCC1-204ENST00000398958 ABCA5Q8WWZ7 1642 aa16.64■□□□□ 0.25
RCC1-204ENST00000398958 IFT140Q96RY7 1462 aa16.61■□□□□ 0.25
RCC1-204ENST00000398958 MIER1Q8N108 512 aa16.59■□□□□ 0.25
RCC1-204ENST00000398958 CHMP7Q8WUX9 453 aaPredicted RBP16.59■□□□□ 0.25
RCC1-204ENST00000398958 PBRM1Q86U86 1689 aa16.55■□□□□ 0.24
RCC1-204ENST00000398958 EIF4G3O43432 1585 aaKnown RBP16.54■□□□□ 0.24
RCC1-204ENST00000398958 CUL7Q14999 1698 aa16.52■□□□□ 0.24
RCC1-204ENST00000398958 GRIN2BQ13224 1484 aa16.52■□□□□ 0.24
RCC1-204ENST00000398958 CCNB3Q8WWL7 1395 aa16.5■□□□□ 0.23
RCC1-204ENST00000398958 SNAPC4Q5SXM2 1469 aa16.5■□□□□ 0.23
RCC1-204ENST00000398958 CHIC2Q9UKJ5 165 aa16.49■□□□□ 0.23
RCC1-204ENST00000398958 DHX57Q6P158 1386 aaKnown RBP16.48■□□□□ 0.23
RCC1-204ENST00000398958 FHAD1B1AJZ9 1412 aa16.47■□□□□ 0.23
RCC1-204ENST00000398958 PHLDB1Q86UU1 1377 aa16.46■□□□□ 0.23
RCC1-204ENST00000398958 RRBP1Q9P2E9 1410 aaKnown RBP16.44■□□□□ 0.22
RCC1-204ENST00000398958 ADAMTS12P58397 1594 aa16.44■□□□□ 0.22
RCC1-204ENST00000398958 PCF11O94913 1555 aaKnown RBP16.43■□□□□ 0.22
RCC1-204ENST00000398958 TIAM1Q13009 1591 aa16.43■□□□□ 0.22
RCC1-204ENST00000398958 LRRC9Q6ZRR7 1453 aa16.4■□□□□ 0.22
RCC1-204ENST00000398958 CTTNBP2Q8WZ74 1663 aa16.4■□□□□ 0.22
RCC1-204ENST00000398958 MTUS2Q5JR59 1369 aa16.39■□□□□ 0.21
RCC1-204ENST00000398958 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
RCC1-204ENST00000398958 ZNF777Q9ULD5 760 aaPredicted RBP16.38■□□□□ 0.21
RCC1-204ENST00000398958 SIN3AQ96ST3 1273 aa16.36■□□□□ 0.21
RCC1-204ENST00000398958 GRIN2AQ12879 1464 aa16.36■□□□□ 0.21
RCC1-204ENST00000398958 RRP7BPQ9NSQ0 103 aa16.35■□□□□ 0.21
RCC1-204ENST00000398958 MAGI1Q96QZ7 1491 aaPredicted RBP16.33■□□□□ 0.2
RCC1-204ENST00000398958 SYNJ2O15056 1496 aa16.32■□□□□ 0.2
RCC1-204ENST00000398958 HIRIP3Q9BW71 556 aaPredicted RBP16.32■□□□□ 0.2
RCC1-204ENST00000398958 JPH4Q96JJ6 628 aa16.31■□□□□ 0.2
RCC1-204ENST00000398958 IQGAP2Q13576 1575 aa16.29■□□□□ 0.2
RCC1-204ENST00000398958 ZNF644Q9H582 1327 aaPredicted RBP16.29■□□□□ 0.2
RCC1-204ENST00000398958 SUPT16HQ9Y5B9 1047 aaKnown RBP16.28■□□□□ 0.2
RCC1-204ENST00000398958 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
RCC1-204ENST00000398958 CDK13Q14004 1512 aaKnown RBP16.27■□□□□ 0.2
RCC1-204ENST00000398958 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
RCC1-204ENST00000398958 CLSPNQ9HAW4 1339 aa16.25■□□□□ 0.19
RCC1-204ENST00000398958 SETD5Q9C0A6 1442 aa16.25■□□□□ 0.19
RCC1-204ENST00000398958 KIAA0586Q9BVV6 1533 aa16.24■□□□□ 0.19
RCC1-204ENST00000398958 FOXD1Q16676 465 aa16.24■□□□□ 0.19
RCC1-204ENST00000398958 FYCO1Q9BQS8 1478 aa16.23■□□□□ 0.19
RCC1-204ENST00000398958 CFAP43Q8NDM7 1665 aa16.23■□□□□ 0.19
RCC1-204ENST00000398958 TRIM52Q96A61 297 aa16.23■□□□□ 0.19
RCC1-204ENST00000398958 KCNH8Q96L42 1107 aa16.23■□□□□ 0.19
RCC1-204ENST00000398958 EFCAB5A4FU69 1503 aa16.22■□□□□ 0.19
RCC1-204ENST00000398958 FMN1Q68DA7 1419 aa16.22■□□□□ 0.19
RCC1-204ENST00000398958 CHD1O14646 1710 aa16.22■□□□□ 0.19
RCC1-204ENST00000398958 SAMD9Q5K651 1589 aa16.22■□□□□ 0.19
RCC1-204ENST00000398958 MAP3K1Q13233 1512 aa16.21■□□□□ 0.19
RCC1-204ENST00000398958 MAPKBP1O60336 1514 aa16.2■□□□□ 0.18
RCC1-204ENST00000398958 LRRIQ1Q96JM4 1722 aa16.18■□□□□ 0.18
RCC1-204ENST00000398958 NUP160Q12769 1436 aa16.18■□□□□ 0.18
RCC1-204ENST00000398958 PLB1Q6P1J6 1458 aa16.18■□□□□ 0.18
RCC1-204ENST00000398958 TSHZ2Q9NRE2 1034 aa16.18■□□□□ 0.18
RCC1-204ENST00000398958 DISP1Q96F81 1524 aa16.18■□□□□ 0.18
RCC1-204ENST00000398958 PTPRKQ15262 1439 aa16.17■□□□□ 0.18
RCC1-204ENST00000398958 FGD6Q6ZV73 1430 aa16.16■□□□□ 0.18
RCC1-204ENST00000398958 ANP32EQ9BTT0 268 aa16.16■□□□□ 0.18
RCC1-204ENST00000398958 UGGT2Q9NYU1 1516 aa16.15■□□□□ 0.18
RCC1-204ENST00000398958 NCOA2Q15596 1464 aa16.13■□□□□ 0.17
RCC1-204ENST00000398958 MAGI3Q5TCQ9 1506 aa16.13■□□□□ 0.17
RCC1-204ENST00000398958 PRG4Q92954 1404 aaPredicted RBP16.12■□□□□ 0.17
RCC1-204ENST00000398958 KIAA0556O60303 1618 aa16.11■□□□□ 0.17
RCC1-204ENST00000398958 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.16
RCC1-204ENST00000398958 CNGB1Q14028 1251 aaPredicted RBP16.07■□□□□ 0.16
RCC1-204ENST00000398958 CFDP1Q9UEE9 299 aaPredicted RBP16.07■□□□□ 0.16
RCC1-204ENST00000398958 EPRSP07814 1512 aaKnown RBP16.07■□□□□ 0.16
RCC1-204ENST00000398958 ERCC6L2Q5T890 1561 aa16.06■□□□□ 0.16
RCC1-204ENST00000398958 MYOM3Q5VTT5 1437 aa16.05■□□□□ 0.16
RCC1-204ENST00000398958 BCL11AQ9H165 835 aa16.05■□□□□ 0.16
RCC1-204ENST00000398958 CARMIL2Q6F5E8 1435 aa16.05■□□□□ 0.16
RCC1-204ENST00000398958 CCDC18Q5T9S5 1454 aa16.04■□□□□ 0.16
RCC1-204ENST00000398958 PLEKHD1A6NEE1 506 aa16.04■□□□□ 0.16
RCC1-204ENST00000398958 HNRNPMP52272 730 aaKnown RBP eCLIP16.03■□□□□ 0.165e-6■■□□□ 12
RCC1-204ENST00000398958 CDK11AQ9UQ88 783 aaPredicted RBP16.03■□□□□ 0.16
RCC1-204ENST00000398958 NUP153P49790 1475 aaKnown RBP16■□□□□ 0.15
RCC1-204ENST00000398958 SUPT6HQ7KZ85 1726 aaKnown RBP15.99■□□□□ 0.15
RCC1-204ENST00000398958 ZNF326Q5BKZ1 582 aaKnown RBP15.99■□□□□ 0.15
RCC1-204ENST00000398958 BCANQ96GW7 911 aa15.99■□□□□ 0.15
RCC1-204ENST00000398958 PTPRGP23470 1445 aa15.99■□□□□ 0.15
RCC1-204ENST00000398958 NAIPQ13075 1403 aa15.99■□□□□ 0.15
RCC1-204ENST00000398958 PPP1R15AO75807 674 aaPredicted RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms