RNA–Protein interactions for RNA: ENST00000398733.7

UBE2D2-202, Transcript of ubiquitin conjugating enzyme E2 D2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2D2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D2-202ENST00000398733 ATP1B4Q9UN42 357 aaPredicted RBP25.67■■□□□ 1.7
UBE2D2-202ENST00000398733 PHLDB1Q86UU1 1377 aa25.66■■□□□ 1.7
UBE2D2-202ENST00000398733 TRIM52Q96A61 297 aa25.66■■□□□ 1.7
UBE2D2-202ENST00000398733 TIAM1Q13009 1591 aa25.66■■□□□ 1.7
UBE2D2-202ENST00000398733 PPP1R15AO75807 674 aaPredicted RBP25.63■■□□□ 1.69
UBE2D2-202ENST00000398733 P3H3Q8IVL6 736 aa25.63■■□□□ 1.69
UBE2D2-202ENST00000398733 IGF1RP08069 1367 aa25.61■■□□□ 1.69
UBE2D2-202ENST00000398733 NEFLP07196 543 aa25.61■■□□□ 1.69
UBE2D2-202ENST00000398733 LRRC9Q6ZRR7 1453 aa25.61■■□□□ 1.69
UBE2D2-202ENST00000398733 NCAPD3P42695 1498 aa25.58■■□□□ 1.69
UBE2D2-202ENST00000398733 CFTRP13569 1480 aa25.57■■□□□ 1.68
UBE2D2-202ENST00000398733 ANP32CO43423 234 aa25.55■■□□□ 1.68
UBE2D2-202ENST00000398733 HMGXB3Q12766 1538 aa25.54■■□□□ 1.68
UBE2D2-202ENST00000398733 CARMIL1Q5VZK9 1371 aa25.54■■□□□ 1.68
UBE2D2-202ENST00000398733 MAP3K1Q13233 1512 aa25.52■■□□□ 1.68
UBE2D2-202ENST00000398733 RBM19Q9Y4C8 960 aaKnown RBP25.5■■□□□ 1.67
UBE2D2-202ENST00000398733 CCER2I3L3R5 266 aa25.47■■□□□ 1.67
UBE2D2-202ENST00000398733 TIMELESSQ9UNS1 1208 aa25.46■■□□□ 1.67
UBE2D2-202ENST00000398733 FHAD1B1AJZ9 1412 aa25.43■■□□□ 1.66
UBE2D2-202ENST00000398733 PCF11O94913 1555 aaKnown RBP25.4■■□□□ 1.66
UBE2D2-202ENST00000398733 TONSLQ96HA7 1378 aa25.38■■□□□ 1.65
UBE2D2-202ENST00000398733 FHOD3Q2V2M9 1422 aa25.37■■□□□ 1.65
UBE2D2-202ENST00000398733 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
UBE2D2-202ENST00000398733 CFAP43Q8NDM7 1665 aa25.33■■□□□ 1.65
UBE2D2-202ENST00000398733 BCL11AQ9H165 835 aa25.32■■□□□ 1.64
UBE2D2-202ENST00000398733 IRX6P78412 446 aaPredicted RBP25.29■■□□□ 1.64
UBE2D2-202ENST00000398733 HNRNPUQ00839 825 aaKnown RBP eCLIP25.28■■□□□ 1.64
UBE2D2-202ENST00000398733 CADPSQ9ULU8 1353 aa25.24■■□□□ 1.63
UBE2D2-202ENST00000398733 CCDC18Q5T9S5 1454 aa25.23■■□□□ 1.63
UBE2D2-202ENST00000398733 FGD6Q6ZV73 1430 aa25.21■■□□□ 1.63
UBE2D2-202ENST00000398733 MSH5O43196 834 aa25.21■■□□□ 1.63
UBE2D2-202ENST00000398733 FYCO1Q9BQS8 1478 aa25.21■■□□□ 1.63
UBE2D2-202ENST00000398733 PRDM2Q13029 1718 aa25.2■■□□□ 1.62
UBE2D2-202ENST00000398733 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.19■■□□□ 1.62
UBE2D2-202ENST00000398733 CASKIN1Q8WXD9 1431 aa25.19■■□□□ 1.62
UBE2D2-202ENST00000398733 PTPRKQ15262 1439 aa25.17■■□□□ 1.62
UBE2D2-202ENST00000398733 MTUS2Q5JR59 1369 aa25.16■■□□□ 1.62
UBE2D2-202ENST00000398733 UACAQ9BZF9 1416 aa25.15■■□□□ 1.62
UBE2D2-202ENST00000398733 RAD54L2Q9Y4B4 1467 aa25.13■■□□□ 1.61
UBE2D2-202ENST00000398733 CDK11AQ9UQ88 783 aaPredicted RBP25.12■■□□□ 1.61
UBE2D2-202ENST00000398733 HFM1A2PYH4 1435 aa25.11■■□□□ 1.61
UBE2D2-202ENST00000398733 EFCAB5A4FU69 1503 aa25.08■■□□□ 1.6
UBE2D2-202ENST00000398733 PTPN23Q9H3S7 1636 aa25.07■■□□□ 1.6
UBE2D2-202ENST00000398733 AQRO60306 1485 aaKnown RBP eCLIP25.07■■□□□ 1.61e-7■■■□□ 17.7
UBE2D2-202ENST00000398733 WASHC2AQ641Q2 1341 aa25.07■■□□□ 1.6
UBE2D2-202ENST00000398733 HSPA5P11021 654 aaKnown RBP25.06■■□□□ 1.6
UBE2D2-202ENST00000398733 NAIPQ13075 1403 aa25.06■■□□□ 1.6
UBE2D2-202ENST00000398733 FMN1Q68DA7 1419 aa25.05■■□□□ 1.6
UBE2D2-202ENST00000398733 RRP7BPQ9NSQ0 103 aa25.04■■□□□ 1.6
UBE2D2-202ENST00000398733 CHIC2Q9UKJ5 165 aa25.03■■□□□ 1.6
UBE2D2-202ENST00000398733 FANCD2Q9BXW9 1451 aa25.02■■□□□ 1.6
UBE2D2-202ENST00000398733 CCDC184Q52MB2 194 aa25.02■■□□□ 1.6
UBE2D2-202ENST00000398733 ERICH6Q7L0X2 663 aa25.02■■□□□ 1.6
UBE2D2-202ENST00000398733 SNAPC4Q5SXM2 1469 aa24.99■■□□□ 1.59
UBE2D2-202ENST00000398733 KDM5BQ9UGL1 1544 aa24.99■■□□□ 1.59
UBE2D2-202ENST00000398733 FANCIQ9NVI1 1328 aa24.99■■□□□ 1.59
UBE2D2-202ENST00000398733 NCOA2Q15596 1464 aa24.98■■□□□ 1.59
UBE2D2-202ENST00000398733 MYOM3Q5VTT5 1437 aa24.96■■□□□ 1.59
UBE2D2-202ENST00000398733 FAM9BQ8IZU0 186 aa24.96■■□□□ 1.59
UBE2D2-202ENST00000398733 POLA1P09884 1462 aaPredicted RBP24.96■■□□□ 1.59
UBE2D2-202ENST00000398733 ABCA10Q8WWZ4 1543 aa24.96■■□□□ 1.59
UBE2D2-202ENST00000398733 EIF4G2P78344 907 aaKnown RBP eCLIP24.95■■□□□ 1.58
UBE2D2-202ENST00000398733 CTTNBP2Q8WZ74 1663 aa24.93■■□□□ 1.58
UBE2D2-202ENST00000398733 PPP4R2Q9NY27 417 aa24.92■■□□□ 1.58
UBE2D2-202ENST00000398733 B4GALNT3Q6L9W6 998 aa24.89■■□□□ 1.58
UBE2D2-202ENST00000398733 TOPBP1Q92547 1522 aa24.89■■□□□ 1.57
UBE2D2-202ENST00000398733 C11orf95C9JLR9 678 aaPredicted RBP24.89■■□□□ 1.57
UBE2D2-202ENST00000398733 DNMBPQ6XZF7 1577 aa24.89■■□□□ 1.57
UBE2D2-202ENST00000398733 FOXD1Q16676 465 aa24.88■■□□□ 1.57
UBE2D2-202ENST00000398733 CC2D2AQ9P2K1 1620 aa24.88■■□□□ 1.57
UBE2D2-202ENST00000398733 MRS2Q9HD23 443 aa24.87■■□□□ 1.57
UBE2D2-202ENST00000398733 LRRIQ1Q96JM4 1722 aa24.87■■□□□ 1.57
UBE2D2-202ENST00000398733 CUL7Q14999 1698 aa24.87■■□□□ 1.57
UBE2D2-202ENST00000398733 CNTLNQ9NXG0 1405 aa24.86■■□□□ 1.57
UBE2D2-202ENST00000398733 L3MBTL2Q969R5 705 aa24.85■■□□□ 1.57
UBE2D2-202ENST00000398733 PRKRIP1Q9H875 184 aaPredicted RBP24.85■■□□□ 1.57
UBE2D2-202ENST00000398733 ERICH6BQ5W0A0 696 aa24.83■■□□□ 1.57
UBE2D2-202ENST00000398733 DENND4BO75064 1496 aaPredicted RBP24.83■■□□□ 1.57
UBE2D2-202ENST00000398733 SUPT6HQ7KZ85 1726 aaKnown RBP24.83■■□□□ 1.56
UBE2D2-202ENST00000398733 GRIN2BQ13224 1484 aa24.82■■□□□ 1.56
UBE2D2-202ENST00000398733 TDRD9Q8NDG6 1382 aaKnown RBP24.82■■□□□ 1.56
UBE2D2-202ENST00000398733 MPHOSPH9Q99550 1183 aa24.81■■□□□ 1.56
UBE2D2-202ENST00000398733 NESP48681 1621 aa24.79■■□□□ 1.56
UBE2D2-202ENST00000398733 CNGB1Q14028 1251 aaPredicted RBP24.79■■□□□ 1.56
UBE2D2-202ENST00000398733 ARID3CA6NKF2 412 aa24.78■■□□□ 1.56
UBE2D2-202ENST00000398733 CCDC7Q96M83 1385 aa24.78■■□□□ 1.56
UBE2D2-202ENST00000398733 EHBP1L1Q8N3D4 1523 aa24.78■■□□□ 1.56
UBE2D2-202ENST00000398733 KDM6BO15054 1643 aa24.76■■□□□ 1.55
UBE2D2-202ENST00000398733 SAMD9Q5K651 1589 aa24.76■■□□□ 1.55
UBE2D2-202ENST00000398733 MAGI3Q5TCQ9 1506 aa24.75■■□□□ 1.55
UBE2D2-202ENST00000398733 UGGT2Q9NYU1 1516 aa24.75■■□□□ 1.55
UBE2D2-202ENST00000398733 ZBED9Q6R2W3 1325 aa24.75■■□□□ 1.55
UBE2D2-202ENST00000398733 NCOA1Q15788 1441 aa24.73■■□□□ 1.55
UBE2D2-202ENST00000398733 NBPF8Q3BBV2 869 aa24.72■■□□□ 1.55
UBE2D2-202ENST00000398733 HECW1Q76N89 1606 aa24.71■■□□□ 1.55
UBE2D2-202ENST00000398733 KIF7Q2M1P5 1343 aa24.67■■□□□ 1.54
UBE2D2-202ENST00000398733 GCC2Q8IWJ2 1684 aa24.67■■□□□ 1.54
UBE2D2-202ENST00000398733 ARHGEF11O15085 1522 aa24.67■■□□□ 1.54
UBE2D2-202ENST00000398733 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
UBE2D2-202ENST00000398733 SENP3-EIF4A1A0A087X0R7 540 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms