RNA–Protein interactions for RNA: ENST00000398733.7

UBE2D2-202, Transcript of ubiquitin conjugating enzyme E2 D2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2D2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D2-202ENST00000398733 NISCHQ9Y2I1 1504 aa35.68■■■■□ 3.3
UBE2D2-202ENST00000398733 SHROOM4Q9ULL8 1493 aa31.28■■■□□ 2.6
UBE2D2-202ENST00000398733 SUPT5HO00267 1087 aaKnown RBP30.95■■■□□ 2.54
UBE2D2-202ENST00000398733 ZCCHC6Q5VYS8 1495 aaKnown RBP30.25■■■□□ 2.43
UBE2D2-202ENST00000398733 MYO15BQ96JP2 1530 aa30.21■■■□□ 2.43
UBE2D2-202ENST00000398733 HRCP23327 699 aa30.2■■■□□ 2.42
UBE2D2-202ENST00000398733 CHIC1Q5VXU3 224 aa30.16■■■□□ 2.42
UBE2D2-202ENST00000398733 PCGF6Q9BYE7 350 aa29.98■■■□□ 2.39
UBE2D2-202ENST00000398733 DCAF8L2P0C7V8 631 aa29.96■■■□□ 2.39
UBE2D2-202ENST00000398733 CCDC180Q9P1Z9 1646 aa29.85■■■□□ 2.37
UBE2D2-202ENST00000398733 PPARGC1BQ86YN6 1023 aaKnown RBP29.71■■■□□ 2.35
UBE2D2-202ENST00000398733 LOC105371045A0A1W2PR82 267 aa29.48■■■□□ 2.31
UBE2D2-202ENST00000398733 DCAF1Q9Y4B6 1507 aa29.34■■■□□ 2.29
UBE2D2-202ENST00000398733 TRIM26Q12899 539 aaPredicted RBP29.09■■■□□ 2.25
UBE2D2-202ENST00000398733 FAM9AQ8IZU1 332 aaPredicted RBP28.65■■■□□ 2.18
UBE2D2-202ENST00000398733 TRIM41Q8WV44 630 aa28.65■■■□□ 2.18
UBE2D2-202ENST00000398733 ABCC9O60706 1549 aa28.64■■■□□ 2.18
UBE2D2-202ENST00000398733 ZEB1P37275 1124 aaPredicted RBP28.6■■■□□ 2.17
UBE2D2-202ENST00000398733 EHMT2Q96KQ7 1210 aa28.56■■■□□ 2.16
UBE2D2-202ENST00000398733 RSF1Q96T23 1441 aaPredicted RBP28.54■■■□□ 2.16
UBE2D2-202ENST00000398733 SCRIBQ14160 1630 aa28.43■■■□□ 2.14
UBE2D2-202ENST00000398733 RB1CC1Q8TDY2 1594 aa28.36■■■□□ 2.13
UBE2D2-202ENST00000398733 SCAF1Q9H7N4 1312 aaKnown RBP28.27■■■□□ 2.12
UBE2D2-202ENST00000398733 PELP1Q8IZL8 1130 aaKnown RBP28.14■■■□□ 2.1
UBE2D2-202ENST00000398733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28■■■□□ 2.07
UBE2D2-202ENST00000398733 CECR2Q9BXF3 1484 aa27.97■■■□□ 2.07
UBE2D2-202ENST00000398733 CCER1Q8TC90 406 aaPredicted RBP27.91■■■□□ 2.06
UBE2D2-202ENST00000398733 MROH2BQ7Z745 1585 aa27.87■■■□□ 2.05
UBE2D2-202ENST00000398733 TTBK1Q5TCY1 1321 aaPredicted RBP27.76■■■□□ 2.03
UBE2D2-202ENST00000398733 WIZO95785 1651 aa27.76■■■□□ 2.03
UBE2D2-202ENST00000398733 ACIN1Q9UKV3 1341 aaKnown RBP27.75■■■□□ 2.03
UBE2D2-202ENST00000398733 NEUROD1Q13562 356 aa27.74■■■□□ 2.03
UBE2D2-202ENST00000398733 DIEXFQ68CQ4 756 aaKnown RBP27.64■■■□□ 2.01
UBE2D2-202ENST00000398733 NACADO15069 1562 aa27.56■■■□□ 2
UBE2D2-202ENST00000398733 GTF3C3Q9Y5Q9 886 aa27.54■■■□□ 2
UBE2D2-202ENST00000398733 CENPBP07199 599 aaPredicted RBP27.49■■□□□ 1.99
UBE2D2-202ENST00000398733 BAZ1AQ9NRL2 1556 aaPredicted RBP27.48■■□□□ 1.99
UBE2D2-202ENST00000398733 EIF4G1Q04637 1599 aaKnown RBP27.44■■□□□ 1.98
UBE2D2-202ENST00000398733 ABCC8Q09428 1581 aa27.43■■□□□ 1.98
UBE2D2-202ENST00000398733 CCDC88BA6NC98 1476 aa27.41■■□□□ 1.98
UBE2D2-202ENST00000398733 CEP162Q5TB80 1403 aa27.38■■□□□ 1.97
UBE2D2-202ENST00000398733 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.97
UBE2D2-202ENST00000398733 SOGA1O94964 1423 aa27.3■■□□□ 1.96
UBE2D2-202ENST00000398733 UBTFP17480 764 aaKnown RBP27.27■■□□□ 1.96
UBE2D2-202ENST00000398733 ZNF316A6NFI3 1004 aaPredicted RBP27.22■■□□□ 1.95
UBE2D2-202ENST00000398733 YTHDC1Q96MU7 727 aaKnown RBP27.21■■□□□ 1.95
UBE2D2-202ENST00000398733 TNIKQ9UKE5 1360 aa27.21■■□□□ 1.95
UBE2D2-202ENST00000398733 TOP2AP11388 1531 aaKnown RBP27.18■■□□□ 1.94
UBE2D2-202ENST00000398733 CSRNP3Q8WYN3 585 aa27.18■■□□□ 1.94
UBE2D2-202ENST00000398733 RUSC2Q8N2Y8 1516 aa27.15■■□□□ 1.94
UBE2D2-202ENST00000398733 SMARCA2P51531 1590 aa27.11■■□□□ 1.93
UBE2D2-202ENST00000398733 HNRNPUL2Q1KMD3 747 aaKnown RBP27.06■■□□□ 1.92
UBE2D2-202ENST00000398733 SMARCA4P51532 1647 aa27.05■■□□□ 1.92
UBE2D2-202ENST00000398733 MIER1Q8N108 512 aa27■■□□□ 1.91
UBE2D2-202ENST00000398733 EEA1Q15075 1411 aa26.99■■□□□ 1.91
UBE2D2-202ENST00000398733 GOLGA3Q08378 1498 aa26.96■■□□□ 1.91
UBE2D2-202ENST00000398733 MYT1Q01538 1121 aa26.81■■□□□ 1.88
UBE2D2-202ENST00000398733 RANGAP1P46060 587 aaPredicted RBP26.81■■□□□ 1.88
UBE2D2-202ENST00000398733 CLIP1P30622 1438 aa26.76■■□□□ 1.87
UBE2D2-202ENST00000398733 APLP2Q06481 763 aa26.74■■□□□ 1.87
UBE2D2-202ENST00000398733 CEP164Q9UPV0 1460 aa26.73■■□□□ 1.87
UBE2D2-202ENST00000398733 PABPN1Q86U42 306 aaKnown RBP eCLIP26.69■■□□□ 1.86
UBE2D2-202ENST00000398733 UNC13AQ9UPW8 1703 aa26.69■■□□□ 1.86
UBE2D2-202ENST00000398733 VPS8Q8N3P4 1428 aa26.65■■□□□ 1.86
UBE2D2-202ENST00000398733 SYNJ1O43426 1573 aa26.64■■□□□ 1.85
UBE2D2-202ENST00000398733 KIF21BO75037 1637 aa26.6■■□□□ 1.85
UBE2D2-202ENST00000398733 RAPGEF2Q9Y4G8 1499 aa26.56■■□□□ 1.84
UBE2D2-202ENST00000398733 BAZ1BQ9UIG0 1483 aaKnown RBP26.45■■□□□ 1.82
UBE2D2-202ENST00000398733 DHX57Q6P158 1386 aaKnown RBP26.4■■□□□ 1.82
UBE2D2-202ENST00000398733 PEG3Q9GZU2 1588 aa26.35■■□□□ 1.81
UBE2D2-202ENST00000398733 BICRAQ9NZM4 1560 aa26.35■■□□□ 1.81
UBE2D2-202ENST00000398733 SUPT16HQ9Y5B9 1047 aaKnown RBP26.33■■□□□ 1.81
UBE2D2-202ENST00000398733 KANK4Q5T7N3 995 aaPredicted RBP26.32■■□□□ 1.8
UBE2D2-202ENST00000398733 CLSPNQ9HAW4 1339 aa26.32■■□□□ 1.8
UBE2D2-202ENST00000398733 ATAD2BQ9ULI0 1458 aa26.27■■□□□ 1.8
UBE2D2-202ENST00000398733 ITGAEP38570 1179 aa26.2■■□□□ 1.78
UBE2D2-202ENST00000398733 ARAP1Q96P48 1450 aa26.2■■□□□ 1.78
UBE2D2-202ENST00000398733 TOP2BQ02880 1626 aa26.16■■□□□ 1.78
UBE2D2-202ENST00000398733 PRXQ9BXM0 1461 aa26.1■■□□□ 1.77
UBE2D2-202ENST00000398733 KCNH8Q96L42 1107 aa26.09■■□□□ 1.77
UBE2D2-202ENST00000398733 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
UBE2D2-202ENST00000398733 RRBP1Q9P2E9 1410 aaKnown RBP26.07■■□□□ 1.76
UBE2D2-202ENST00000398733 TSHZ2Q9NRE2 1034 aa26.04■■□□□ 1.76
UBE2D2-202ENST00000398733 CCNB3Q8WWL7 1395 aa26.03■■□□□ 1.76
UBE2D2-202ENST00000398733 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
UBE2D2-202ENST00000398733 BCANQ96GW7 911 aa25.95■■□□□ 1.75
UBE2D2-202ENST00000398733 CUX2O14529 1486 aa25.93■■□□□ 1.74
UBE2D2-202ENST00000398733 RAB3GAP2Q9H2M9 1393 aa25.92■■□□□ 1.74
UBE2D2-202ENST00000398733 KIF27Q86VH2 1401 aa25.91■■□□□ 1.74
UBE2D2-202ENST00000398733 ARHGAP35Q9NRY4 1499 aa25.9■■□□□ 1.74
UBE2D2-202ENST00000398733 DDX10Q13206 875 aaKnown RBP25.87■■□□□ 1.73
UBE2D2-202ENST00000398733 CUX1P39880 1505 aa25.87■■□□□ 1.73
UBE2D2-202ENST00000398733 MAPKBP1O60336 1514 aa25.82■■□□□ 1.72
UBE2D2-202ENST00000398733 SIN3AQ96ST3 1273 aa25.82■■□□□ 1.72
UBE2D2-202ENST00000398733 FKBP8Q14318 412 aa25.81■■□□□ 1.72
UBE2D2-202ENST00000398733 ANP32EQ9BTT0 268 aa25.79■■□□□ 1.72
UBE2D2-202ENST00000398733 HIRIP3Q9BW71 556 aaPredicted RBP25.76■■□□□ 1.71
UBE2D2-202ENST00000398733 FAM50AQ14320 339 aaKnown RBP25.75■■□□□ 1.71
UBE2D2-202ENST00000398733 SETD5Q9C0A6 1442 aa25.73■■□□□ 1.71
UBE2D2-202ENST00000398733 WDR97A6NE52 1622 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms