RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PRXQ9BXM0 1461 aa35.41■■■■□ 3.26
TSPAN4-206ENST00000397408 KIAA0586Q9BVV6 1533 aa35.39■■■■□ 3.26
TSPAN4-206ENST00000397408 CSRNP3Q8WYN3 585 aa35.39■■■■□ 3.26
TSPAN4-206ENST00000397408 FAM9AQ8IZU1 332 aaPredicted RBP35.36■■■■□ 3.25
TSPAN4-206ENST00000397408 ARAP1Q96P48 1450 aa35.35■■■■□ 3.25
TSPAN4-206ENST00000397408 ERCC6L2Q5T890 1561 aa35.31■■■■□ 3.24
TSPAN4-206ENST00000397408 JPH4Q96JJ6 628 aa35.3■■■■□ 3.24
TSPAN4-206ENST00000397408 PRG4Q92954 1404 aaPredicted RBP35.26■■■■□ 3.23
TSPAN4-206ENST00000397408 IQGAP2Q13576 1575 aa35.25■■■■□ 3.23
TSPAN4-206ENST00000397408 CYB5RLQ6IPT4 315 aa35.23■■■■□ 3.23
TSPAN4-206ENST00000397408 CTTNBP2Q8WZ74 1663 aa35.17■■■■□ 3.22
TSPAN4-206ENST00000397408 KIF21BO75037 1637 aa35.12■■■■□ 3.21
TSPAN4-206ENST00000397408 UGGT2Q9NYU1 1516 aa35.04■■■■□ 3.2
TSPAN4-206ENST00000397408 CARMIL2Q6F5E8 1435 aa35.01■■■■□ 3.19
TSPAN4-206ENST00000397408 DISP1Q96F81 1524 aa34.97■■■■□ 3.19
TSPAN4-206ENST00000397408 GOLGA3Q08378 1498 aa34.93■■■■□ 3.18
TSPAN4-206ENST00000397408 EHMT2Q96KQ7 1210 aa34.91■■■■□ 3.18
TSPAN4-206ENST00000397408 KIAA0556O60303 1618 aa34.91■■■■□ 3.18
TSPAN4-206ENST00000397408 TNIKQ9UKE5 1360 aa34.88■■■■□ 3.17
TSPAN4-206ENST00000397408 PTPRGP23470 1445 aa34.85■■■■□ 3.17
TSPAN4-206ENST00000397408 TTBK1Q5TCY1 1321 aaPredicted RBP34.83■■■■□ 3.17
TSPAN4-206ENST00000397408 UBTFP17480 764 aaKnown RBP34.8■■■■□ 3.16
TSPAN4-206ENST00000397408 SAMD9Q5K651 1589 aa34.72■■■■□ 3.15
TSPAN4-206ENST00000397408 ADCY10Q96PN6 1610 aa34.72■■■■□ 3.15
TSPAN4-206ENST00000397408 RANGAP1P46060 587 aaPredicted RBP34.72■■■■□ 3.15
TSPAN4-206ENST00000397408 P3H3Q8IVL6 736 aa34.65■■■■□ 3.14
TSPAN4-206ENST00000397408 UACAQ9BZF9 1416 aa34.62■■■■□ 3.13
TSPAN4-206ENST00000397408 EFCAB5A4FU69 1503 aa34.61■■■■□ 3.13
TSPAN4-206ENST00000397408 UHRF1BP1LA0JNW5 1464 aa34.58■■■■□ 3.13
TSPAN4-206ENST00000397408 ABCC2Q92887 1545 aa34.58■■■■□ 3.13
TSPAN4-206ENST00000397408 PLB1Q6P1J6 1458 aa34.55■■■■□ 3.12
TSPAN4-206ENST00000397408 NPM1P06748 294 aaKnown RBP eCLIP34.55■■■■□ 3.12
TSPAN4-206ENST00000397408 FHOD3Q2V2M9 1422 aa34.54■■■■□ 3.12
TSPAN4-206ENST00000397408 ABCA8O94911 1581 aa34.51■■■■□ 3.11
TSPAN4-206ENST00000397408 TRHP20396 242 aaPredicted RBP34.47■■■■□ 3.11
TSPAN4-206ENST00000397408 MAPKBP1O60336 1514 aa34.46■■■■□ 3.11
TSPAN4-206ENST00000397408 ARHGAP35Q9NRY4 1499 aa34.45■■■■□ 3.11
TSPAN4-206ENST00000397408 KDM5BQ9UGL1 1544 aa34.41■■■■□ 3.1
TSPAN4-206ENST00000397408 ZCCHC11Q5TAX3 1644 aaKnown RBP34.37■■■■□ 3.09
TSPAN4-206ENST00000397408 RAPGEF6Q8TEU7 1601 aa34.36■■■■□ 3.09
TSPAN4-206ENST00000397408 CLIP1P30622 1438 aa34.3■■■■□ 3.08
TSPAN4-206ENST00000397408 ASXL2Q76L83 1435 aa34.3■■■■□ 3.08
TSPAN4-206ENST00000397408 LOC105371045A0A1W2PR82 267 aa34.3■■■■□ 3.08
TSPAN4-206ENST00000397408 ABCC10Q5T3U5 1492 aa34.27■■■■□ 3.08
TSPAN4-206ENST00000397408 FMN1Q68DA7 1419 aa34.26■■■■□ 3.08
TSPAN4-206ENST00000397408 ARID3CA6NKF2 412 aa34.25■■■■□ 3.07
TSPAN4-206ENST00000397408 KIF13AQ9H1H9 1805 aa34.25■■■■□ 3.07
TSPAN4-206ENST00000397408 DIP2BQ9P265 1576 aa34.25■■■■□ 3.07
TSPAN4-206ENST00000397408 NUP153P49790 1475 aaKnown RBP34.24■■■■□ 3.07
TSPAN4-206ENST00000397408 ATP10BO94823 1461 aa34.21■■■■□ 3.07
TSPAN4-206ENST00000397408 CEP162Q5TB80 1403 aa34.2■■■■□ 3.07
TSPAN4-206ENST00000397408 FAM69CQ0P6D2 419 aa34.18■■■■□ 3.06
TSPAN4-206ENST00000397408 WDR7Q9Y4E6 1490 aa34.15■■■■□ 3.06
TSPAN4-206ENST00000397408 HECW1Q76N89 1606 aa34.12■■■■□ 3.05
TSPAN4-206ENST00000397408 EPRSP07814 1512 aaKnown RBP34.1■■■■□ 3.05
TSPAN4-206ENST00000397408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.09■■■■□ 3.05
TSPAN4-206ENST00000397408 HNRNPUL2Q1KMD3 747 aaKnown RBP34.09■■■■□ 3.05
TSPAN4-206ENST00000397408 PCF11O94913 1555 aaKnown RBP34.06■■■■□ 3.04
TSPAN4-206ENST00000397408 ATP1B4Q9UN42 357 aaPredicted RBP34.06■■■■□ 3.04
TSPAN4-206ENST00000397408 GLI2P10070 1586 aa34.06■■■■□ 3.04
TSPAN4-206ENST00000397408 CDK13Q14004 1512 aaKnown RBP34.04■■■■□ 3.04
TSPAN4-206ENST00000397408 CASKIN1Q8WXD9 1431 aa34.02■■■■□ 3.04
TSPAN4-206ENST00000397408 KCNH8Q96L42 1107 aa33.98■■■■□ 3.03
TSPAN4-206ENST00000397408 FYCO1Q9BQS8 1478 aa33.96■■■■□ 3.03
TSPAN4-206ENST00000397408 TSPOAP1O95153 1857 aa33.95■■■■□ 3.03
TSPAN4-206ENST00000397408 LRRIQ1Q96JM4 1722 aa33.93■■■■□ 3.02
TSPAN4-206ENST00000397408 MAP3K4Q9Y6R4 1608 aa33.92■■■■□ 3.02
TSPAN4-206ENST00000397408 PLEKHD1A6NEE1 506 aa33.9■■■■□ 3.02
TSPAN4-206ENST00000397408 CCDC18Q5T9S5 1454 aa33.88■■■■□ 3.01
TSPAN4-206ENST00000397408 CFAP43Q8NDM7 1665 aa33.86■■■■□ 3.01
TSPAN4-206ENST00000397408 PPRC1Q5VV67 1664 aaKnown RBP33.85■■■■□ 3.01
TSPAN4-206ENST00000397408 ABCA9Q8IUA7 1624 aa33.81■■■■□ 3
TSPAN4-206ENST00000397408 CD109Q6YHK3 1445 aa33.81■■■■□ 3
TSPAN4-206ENST00000397408 CDK11AQ9UQ88 783 aaPredicted RBP33.8■■■■□ 3
TSPAN4-206ENST00000397408 VPS8Q8N3P4 1428 aa33.77■■■■□ 3
TSPAN4-206ENST00000397408 TEX14Q8IWB6 1497 aa33.75■■■□□ 2.99
TSPAN4-206ENST00000397408 TROQ12816 1431 aaPredicted RBP33.74■■■□□ 2.99
TSPAN4-206ENST00000397408 MAGI3Q5TCQ9 1506 aa33.73■■■□□ 2.99
TSPAN4-206ENST00000397408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.71■■■□□ 2.99
TSPAN4-206ENST00000397408 TTC37Q6PGP7 1564 aa33.69■■■□□ 2.98
TSPAN4-206ENST00000397408 KIF14Q15058 1648 aa33.68■■■□□ 2.98
TSPAN4-206ENST00000397408 KDM6BO15054 1643 aa33.66■■■□□ 2.98
TSPAN4-206ENST00000397408 MTUS2Q5JR59 1369 aa33.54■■■□□ 2.96
TSPAN4-206ENST00000397408 TIAM1Q13009 1591 aa33.53■■■□□ 2.96
TSPAN4-206ENST00000397408 MYO5CQ9NQX4 1742 aa33.52■■■□□ 2.96
TSPAN4-206ENST00000397408 COL17A1Q9UMD9 1497 aaPredicted RBP33.51■■■□□ 2.96
TSPAN4-206ENST00000397408 EHBP1L1Q8N3D4 1523 aa33.51■■■□□ 2.95
TSPAN4-206ENST00000397408 NEO1Q92859 1461 aa33.5■■■□□ 2.95
TSPAN4-206ENST00000397408 PLCH2O75038 1416 aa33.49■■■□□ 2.95
TSPAN4-206ENST00000397408 FANCAO15360 1455 aa33.48■■■□□ 2.95
TSPAN4-206ENST00000397408 CFAP74Q9C0B2 1584 aa33.46■■■□□ 2.95
TSPAN4-206ENST00000397408 PHLDB1Q86UU1 1377 aa33.45■■■□□ 2.95
TSPAN4-206ENST00000397408 ARAP3Q8WWN8 1544 aa33.44■■■□□ 2.94
TSPAN4-206ENST00000397408 MAP3K1Q13233 1512 aa33.42■■■□□ 2.94
TSPAN4-206ENST00000397408 PREX2Q70Z35 1606 aa33.4■■■□□ 2.94
TSPAN4-206ENST00000397408 ARHGAP5Q13017 1502 aa33.39■■■□□ 2.94
TSPAN4-206ENST00000397408 AKNAQ7Z591 1439 aa33.39■■■□□ 2.94
TSPAN4-206ENST00000397408 LRRC9Q6ZRR7 1453 aa33.37■■■□□ 2.93
TSPAN4-206ENST00000397408 CDC42BPAQ5VT25 1732 aa33.36■■■□□ 2.93
TSPAN4-206ENST00000397408 CDC42BPBQ9Y5S2 1711 aa33.36■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms