RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 ADAMTS12P58397 1594 aa26.55■■□□□ 1.84
SCNN1A-205ENST00000396966 EIF4G3O43432 1585 aaKnown RBP26.54■■□□□ 1.84
SCNN1A-205ENST00000396966 FHAD1B1AJZ9 1412 aa26.54■■□□□ 1.84
SCNN1A-205ENST00000396966 APLP2Q06481 763 aa26.53■■□□□ 1.84
SCNN1A-205ENST00000396966 EFCAB5A4FU69 1503 aa26.47■■□□□ 1.83
SCNN1A-205ENST00000396966 TTBK1Q5TCY1 1321 aaPredicted RBP26.43■■□□□ 1.82
SCNN1A-205ENST00000396966 SNAPC4Q5SXM2 1469 aa26.39■■□□□ 1.82
SCNN1A-205ENST00000396966 MAGI1Q96QZ7 1491 aaPredicted RBP26.35■■□□□ 1.81
SCNN1A-205ENST00000396966 SAMD9Q5K651 1589 aa26.33■■□□□ 1.81
SCNN1A-205ENST00000396966 IQGAP2Q13576 1575 aa26.31■■□□□ 1.8
SCNN1A-205ENST00000396966 P3H3Q8IVL6 736 aa26.3■■□□□ 1.8
SCNN1A-205ENST00000396966 FHOD3Q2V2M9 1422 aa26.29■■□□□ 1.8
SCNN1A-205ENST00000396966 GRIN2AQ12879 1464 aa26.27■■□□□ 1.8
SCNN1A-205ENST00000396966 PCF11O94913 1555 aaKnown RBP26.25■■□□□ 1.79
SCNN1A-205ENST00000396966 MAP3K1Q13233 1512 aa26.24■■□□□ 1.79
SCNN1A-205ENST00000396966 SYNJ2O15056 1496 aa26.24■■□□□ 1.79
SCNN1A-205ENST00000396966 FMN1Q68DA7 1419 aa26.23■■□□□ 1.79
SCNN1A-205ENST00000396966 ZEB1P37275 1124 aaPredicted RBP26.22■■□□□ 1.79
SCNN1A-205ENST00000396966 TIAM1Q13009 1591 aa26.21■■□□□ 1.79
SCNN1A-205ENST00000396966 FYCO1Q9BQS8 1478 aa26.2■■□□□ 1.78
SCNN1A-205ENST00000396966 CFAP43Q8NDM7 1665 aa26.19■■□□□ 1.78
SCNN1A-205ENST00000396966 CHMP7Q8WUX9 453 aaPredicted RBP26.18■■□□□ 1.78
SCNN1A-205ENST00000396966 KIAA0586Q9BVV6 1533 aa26.18■■□□□ 1.78
SCNN1A-205ENST00000396966 CASKIN1Q8WXD9 1431 aa26.17■■□□□ 1.78
SCNN1A-205ENST00000396966 KANK4Q5T7N3 995 aaPredicted RBP26.16■■□□□ 1.78
SCNN1A-205ENST00000396966 UGGT2Q9NYU1 1516 aa26.15■■□□□ 1.78
SCNN1A-205ENST00000396966 CEP170Q5SW79 1584 aa26.11■■□□□ 1.77
SCNN1A-205ENST00000396966 FBLN2P98095 1184 aa26.09■■□□□ 1.77
SCNN1A-205ENST00000396966 ATP1B4Q9UN42 357 aaPredicted RBP26.09■■□□□ 1.77
SCNN1A-205ENST00000396966 LRRC9Q6ZRR7 1453 aa26.06■■□□□ 1.76
SCNN1A-205ENST00000396966 NUP160Q12769 1436 aa26.04■■□□□ 1.76
SCNN1A-205ENST00000396966 KIAA0556O60303 1618 aa26.03■■□□□ 1.76
SCNN1A-205ENST00000396966 LRRIQ1Q96JM4 1722 aa26.02■■□□□ 1.76
SCNN1A-205ENST00000396966 CHD1O14646 1710 aa25.99■■□□□ 1.75
SCNN1A-205ENST00000396966 DISP1Q96F81 1524 aa25.98■■□□□ 1.75
SCNN1A-205ENST00000396966 HECW1Q76N89 1606 aa25.97■■□□□ 1.75
SCNN1A-205ENST00000396966 RRBP1Q9P2E9 1410 aaKnown RBP25.95■■□□□ 1.74
SCNN1A-205ENST00000396966 CCDC18Q5T9S5 1454 aa25.92■■□□□ 1.74
SCNN1A-205ENST00000396966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.9■■□□□ 1.74
SCNN1A-205ENST00000396966 HNRNPUL2Q1KMD3 747 aaKnown RBP25.89■■□□□ 1.74
SCNN1A-205ENST00000396966 CARMIL2Q6F5E8 1435 aa25.88■■□□□ 1.73
SCNN1A-205ENST00000396966 JPH4Q96JJ6 628 aa25.87■■□□□ 1.73
SCNN1A-205ENST00000396966 CCNB3Q8WWL7 1395 aa25.86■■□□□ 1.73
SCNN1A-205ENST00000396966 MTUS2Q5JR59 1369 aa25.85■■□□□ 1.73
SCNN1A-205ENST00000396966 RAPGEF6Q8TEU7 1601 aa25.83■■□□□ 1.73
SCNN1A-205ENST00000396966 CCER1Q8TC90 406 aaPredicted RBP25.82■■□□□ 1.72
SCNN1A-205ENST00000396966 EHBP1L1Q8N3D4 1523 aa25.82■■□□□ 1.72
SCNN1A-205ENST00000396966 EPRSP07814 1512 aaKnown RBP25.81■■□□□ 1.72
SCNN1A-205ENST00000396966 SUPT6HQ7KZ85 1726 aaKnown RBP25.81■■□□□ 1.72
SCNN1A-205ENST00000396966 PHLDB1Q86UU1 1377 aa25.8■■□□□ 1.72
SCNN1A-205ENST00000396966 CDK13Q14004 1512 aaKnown RBP25.73■■□□□ 1.71
SCNN1A-205ENST00000396966 SHROOM2Q13796 1616 aa25.71■■□□□ 1.71
SCNN1A-205ENST00000396966 MAGI3Q5TCQ9 1506 aa25.71■■□□□ 1.71
SCNN1A-205ENST00000396966 NUP153P49790 1475 aaKnown RBP25.7■■□□□ 1.7
SCNN1A-205ENST00000396966 NCOA2Q15596 1464 aa25.7■■□□□ 1.7
SCNN1A-205ENST00000396966 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
SCNN1A-205ENST00000396966 PLB1Q6P1J6 1458 aa25.65■■□□□ 1.7
SCNN1A-205ENST00000396966 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.64■■□□□ 1.69
SCNN1A-205ENST00000396966 ARHGEF11O15085 1522 aa25.64■■□□□ 1.69
SCNN1A-205ENST00000396966 FGD6Q6ZV73 1430 aa25.63■■□□□ 1.69
SCNN1A-205ENST00000396966 FAM50AQ14320 339 aaKnown RBP25.63■■□□□ 1.69
SCNN1A-205ENST00000396966 ABCA8O94911 1581 aa25.62■■□□□ 1.69
SCNN1A-205ENST00000396966 ARID3CA6NKF2 412 aa25.62■■□□□ 1.69
SCNN1A-205ENST00000396966 MYOM3Q5VTT5 1437 aa25.61■■□□□ 1.69
SCNN1A-205ENST00000396966 ITGAEP38570 1179 aa25.6■■□□□ 1.69
SCNN1A-205ENST00000396966 CLASP1Q7Z460 1538 aa25.6■■□□□ 1.69
SCNN1A-205ENST00000396966 CDK11AQ9UQ88 783 aaPredicted RBP25.6■■□□□ 1.69
SCNN1A-205ENST00000396966 PTPRGP23470 1445 aa25.56■■□□□ 1.68
SCNN1A-205ENST00000396966 PTPN23Q9H3S7 1636 aa25.54■■□□□ 1.68
SCNN1A-205ENST00000396966 TROQ12816 1431 aaPredicted RBP25.49■■□□□ 1.67
SCNN1A-205ENST00000396966 ADCY10Q96PN6 1610 aa25.48■■□□□ 1.67
SCNN1A-205ENST00000396966 ERCC6L2Q5T890 1561 aa25.47■■□□□ 1.67
SCNN1A-205ENST00000396966 MIA2Q96PC5 1412 aa25.46■■□□□ 1.67
SCNN1A-205ENST00000396966 TCOF1Q13428 1488 aaKnown RBP25.45■■□□□ 1.66
SCNN1A-205ENST00000396966 ATP10BO94823 1461 aa25.44■■□□□ 1.66
SCNN1A-205ENST00000396966 SETD5Q9C0A6 1442 aa25.43■■□□□ 1.66
SCNN1A-205ENST00000396966 ITSN2Q9NZM3 1697 aa25.42■■□□□ 1.66
SCNN1A-205ENST00000396966 UACAQ9BZF9 1416 aa25.42■■□□□ 1.66
SCNN1A-205ENST00000396966 RAB3GAP2Q9H2M9 1393 aa25.4■■□□□ 1.66
SCNN1A-205ENST00000396966 PLEKHD1A6NEE1 506 aa25.39■■□□□ 1.66
SCNN1A-205ENST00000396966 KIF14Q15058 1648 aa25.38■■□□□ 1.65
SCNN1A-205ENST00000396966 DHX57Q6P158 1386 aaKnown RBP25.38■■□□□ 1.65
SCNN1A-205ENST00000396966 CLSPNQ9HAW4 1339 aa25.36■■□□□ 1.65
SCNN1A-205ENST00000396966 ABCC2Q92887 1545 aa25.35■■□□□ 1.65
SCNN1A-205ENST00000396966 PTPRKQ15262 1439 aa25.31■■□□□ 1.64
SCNN1A-205ENST00000396966 CDC42BPAQ5VT25 1732 aa25.28■■□□□ 1.64
SCNN1A-205ENST00000396966 GPATCH8Q9UKJ3 1502 aaKnown RBP25.27■■□□□ 1.64
SCNN1A-205ENST00000396966 HFM1A2PYH4 1435 aa25.27■■□□□ 1.64
SCNN1A-205ENST00000396966 UHRF1BP1LA0JNW5 1464 aa25.26■■□□□ 1.63
SCNN1A-205ENST00000396966 OSCARQ8IYS5 282 aa25.25■■□□□ 1.63
SCNN1A-205ENST00000396966 DNMT1P26358 1616 aaKnown RBP25.25■■□□□ 1.63
SCNN1A-205ENST00000396966 GCC2Q8IWJ2 1684 aa25.24■■□□□ 1.63
SCNN1A-205ENST00000396966 ABCC10Q5T3U5 1492 aa25.24■■□□□ 1.63
SCNN1A-205ENST00000396966 CFDP1Q9UEE9 299 aaPredicted RBP25.23■■□□□ 1.63
SCNN1A-205ENST00000396966 ZCCHC11Q5TAX3 1644 aaKnown RBP25.22■■□□□ 1.63
SCNN1A-205ENST00000396966 CAMSAP2Q08AD1 1489 aa25.21■■□□□ 1.63
SCNN1A-205ENST00000396966 NAIPQ13075 1403 aa25.2■■□□□ 1.62
SCNN1A-205ENST00000396966 AKNAQ7Z591 1439 aa25.2■■□□□ 1.62
SCNN1A-205ENST00000396966 DAPK1P53355 1430 aa25.19■■□□□ 1.62
SCNN1A-205ENST00000396966 DIEXFQ68CQ4 756 aaKnown RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms