RNA–Protein interactions for RNA: ENST00000396830.2

IFFO1-203, Transcript of intermediate filament family orphan 1, humanhuman

TSL 1 (best)

Gene IFFO1, Length 1,776 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-203ENST00000396830 RANGAP1P46060 587 aaPredicted RBP27.85■■■□□ 2.05
IFFO1-203ENST00000396830 CLIP1P30622 1438 aa27.85■■■□□ 2.05
IFFO1-203ENST00000396830 GRIN2AQ12879 1464 aa27.84■■■□□ 2.05
IFFO1-203ENST00000396830 CHMP7Q8WUX9 453 aaPredicted RBP27.8■■■□□ 2.04
IFFO1-203ENST00000396830 FBLN2P98095 1184 aa27.79■■■□□ 2.04
IFFO1-203ENST00000396830 CHD1O14646 1710 aa27.73■■■□□ 2.03
IFFO1-203ENST00000396830 CEP170Q5SW79 1584 aa27.7■■■□□ 2.03
IFFO1-203ENST00000396830 VPS8Q8N3P4 1428 aa27.7■■■□□ 2.02
IFFO1-203ENST00000396830 ARHGAP35Q9NRY4 1499 aa27.66■■■□□ 2.02
IFFO1-203ENST00000396830 IQGAP2Q13576 1575 aa27.65■■■□□ 2.02
IFFO1-203ENST00000396830 NUP160Q12769 1436 aa27.65■■■□□ 2.02
IFFO1-203ENST00000396830 KIAA0586Q9BVV6 1533 aa27.63■■■□□ 2.01
IFFO1-203ENST00000396830 ARAP1Q96P48 1450 aa27.62■■■□□ 2.01
IFFO1-203ENST00000396830 PPARGC1BQ86YN6 1023 aaKnown RBP27.58■■■□□ 2.01
IFFO1-203ENST00000396830 P3H3Q8IVL6 736 aa27.55■■■□□ 2
IFFO1-203ENST00000396830 EFCAB5A4FU69 1503 aa27.54■■■□□ 2
IFFO1-203ENST00000396830 SAMD9Q5K651 1589 aa27.53■■■□□ 2
IFFO1-203ENST00000396830 UGGT2Q9NYU1 1516 aa27.51■■□□□ 1.99
IFFO1-203ENST00000396830 ZEB1P37275 1124 aaPredicted RBP27.51■■□□□ 1.99
IFFO1-203ENST00000396830 FHOD3Q2V2M9 1422 aa27.48■■□□□ 1.99
IFFO1-203ENST00000396830 APLP2Q06481 763 aa27.47■■□□□ 1.99
IFFO1-203ENST00000396830 DISP1Q96F81 1524 aa27.42■■□□□ 1.98
IFFO1-203ENST00000396830 JPH4Q96JJ6 628 aa27.42■■□□□ 1.98
IFFO1-203ENST00000396830 CLASP1Q7Z460 1538 aa27.39■■□□□ 1.97
IFFO1-203ENST00000396830 KIAA0556O60303 1618 aa27.38■■□□□ 1.97
IFFO1-203ENST00000396830 SHROOM2Q13796 1616 aa27.33■■□□□ 1.97
IFFO1-203ENST00000396830 PCF11O94913 1555 aaKnown RBP27.29■■□□□ 1.96
IFFO1-203ENST00000396830 PRG4Q92954 1404 aaPredicted RBP27.29■■□□□ 1.96
IFFO1-203ENST00000396830 FMN1Q68DA7 1419 aa27.28■■□□□ 1.96
IFFO1-203ENST00000396830 CARMIL2Q6F5E8 1435 aa27.27■■□□□ 1.96
IFFO1-203ENST00000396830 TTBK1Q5TCY1 1321 aaPredicted RBP27.26■■□□□ 1.95
IFFO1-203ENST00000396830 OSCARQ8IYS5 282 aa27.24■■□□□ 1.95
IFFO1-203ENST00000396830 ERCC6L2Q5T890 1561 aa27.22■■□□□ 1.95
IFFO1-203ENST00000396830 CASKIN1Q8WXD9 1431 aa27.22■■□□□ 1.95
IFFO1-203ENST00000396830 MAP3K1Q13233 1512 aa27.21■■□□□ 1.95
IFFO1-203ENST00000396830 FYCO1Q9BQS8 1478 aa27.19■■□□□ 1.94
IFFO1-203ENST00000396830 ATP1B4Q9UN42 357 aaPredicted RBP27.17■■□□□ 1.94
IFFO1-203ENST00000396830 LRRIQ1Q96JM4 1722 aa27.14■■□□□ 1.93
IFFO1-203ENST00000396830 TIAM1Q13009 1591 aa27.09■■□□□ 1.93
IFFO1-203ENST00000396830 KANK4Q5T7N3 995 aaPredicted RBP27.08■■□□□ 1.93
IFFO1-203ENST00000396830 CFAP43Q8NDM7 1665 aa27.08■■□□□ 1.93
IFFO1-203ENST00000396830 RAPGEF6Q8TEU7 1601 aa27.08■■□□□ 1.92
IFFO1-203ENST00000396830 PLB1Q6P1J6 1458 aa27.07■■□□□ 1.92
IFFO1-203ENST00000396830 PTPRGP23470 1445 aa27.06■■□□□ 1.92
IFFO1-203ENST00000396830 HECW1Q76N89 1606 aa27.06■■□□□ 1.92
IFFO1-203ENST00000396830 CCER1Q8TC90 406 aaPredicted RBP27.04■■□□□ 1.92
IFFO1-203ENST00000396830 ABCA8O94911 1581 aa27.02■■□□□ 1.92
IFFO1-203ENST00000396830 NUP153P49790 1475 aaKnown RBP27■■□□□ 1.91
IFFO1-203ENST00000396830 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.99■■□□□ 1.91
IFFO1-203ENST00000396830 ARID3CA6NKF2 412 aa26.99■■□□□ 1.91
IFFO1-203ENST00000396830 EPRSP07814 1512 aaKnown RBP26.98■■□□□ 1.91
IFFO1-203ENST00000396830 CDK13Q14004 1512 aaKnown RBP26.97■■□□□ 1.91
IFFO1-203ENST00000396830 RRBP1Q9P2E9 1410 aaKnown RBP26.97■■□□□ 1.91
IFFO1-203ENST00000396830 LRRC9Q6ZRR7 1453 aa26.96■■□□□ 1.91
IFFO1-203ENST00000396830 CCDC18Q5T9S5 1454 aa26.95■■□□□ 1.91
IFFO1-203ENST00000396830 UACAQ9BZF9 1416 aa26.9■■□□□ 1.9
IFFO1-203ENST00000396830 MAGI3Q5TCQ9 1506 aa26.89■■□□□ 1.89
IFFO1-203ENST00000396830 HNRNPUL2Q1KMD3 747 aaKnown RBP26.86■■□□□ 1.89
IFFO1-203ENST00000396830 ATP10BO94823 1461 aa26.84■■□□□ 1.89
IFFO1-203ENST00000396830 ABCC2Q92887 1545 aa26.83■■□□□ 1.89
IFFO1-203ENST00000396830 MTUS2Q5JR59 1369 aa26.83■■□□□ 1.89
IFFO1-203ENST00000396830 CCNB3Q8WWL7 1395 aa26.82■■□□□ 1.88
IFFO1-203ENST00000396830 ARHGEF11O15085 1522 aa26.82■■□□□ 1.88
IFFO1-203ENST00000396830 EHBP1L1Q8N3D4 1523 aa26.8■■□□□ 1.88
IFFO1-203ENST00000396830 UHRF1BP1LA0JNW5 1464 aa26.79■■□□□ 1.88
IFFO1-203ENST00000396830 ADCY10Q96PN6 1610 aa26.75■■□□□ 1.87
IFFO1-203ENST00000396830 RIMBP3CA6NJZ7 1639 aa26.74■■□□□ 1.87
IFFO1-203ENST00000396830 RIMBP3BA6NNM3 1639 aa26.74■■□□□ 1.87
IFFO1-203ENST00000396830 RIMBP3Q9UFD9 1639 aa26.74■■□□□ 1.87
IFFO1-203ENST00000396830 SUPT6HQ7KZ85 1726 aaKnown RBP26.72■■□□□ 1.87
IFFO1-203ENST00000396830 PHLDB1Q86UU1 1377 aa26.72■■□□□ 1.87
IFFO1-203ENST00000396830 CDK11AQ9UQ88 783 aaPredicted RBP26.71■■□□□ 1.87
IFFO1-203ENST00000396830 NCOA2Q15596 1464 aa26.7■■□□□ 1.86
IFFO1-203ENST00000396830 ZCCHC11Q5TAX3 1644 aaKnown RBP26.69■■□□□ 1.86
IFFO1-203ENST00000396830 TROQ12816 1431 aaPredicted RBP26.68■■□□□ 1.86
IFFO1-203ENST00000396830 KDM5BQ9UGL1 1544 aa26.68■■□□□ 1.86
IFFO1-203ENST00000396830 PLEKHD1A6NEE1 506 aa26.64■■□□□ 1.86
IFFO1-203ENST00000396830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.63■■□□□ 1.85
IFFO1-203ENST00000396830 CLSPNQ9HAW4 1339 aa26.63■■□□□ 1.85
IFFO1-203ENST00000396830 KIF14Q15058 1648 aa26.62■■□□□ 1.85
IFFO1-203ENST00000396830 CYB5RLQ6IPT4 315 aa26.58■■□□□ 1.85
IFFO1-203ENST00000396830 MYOM3Q5VTT5 1437 aa26.56■■□□□ 1.84
IFFO1-203ENST00000396830 FGD6Q6ZV73 1430 aa26.53■■□□□ 1.84
IFFO1-203ENST00000396830 ABCC10Q5T3U5 1492 aa26.5■■□□□ 1.83
IFFO1-203ENST00000396830 DHX57Q6P158 1386 aaKnown RBP26.47■■□□□ 1.83
IFFO1-203ENST00000396830 KCNH8Q96L42 1107 aa26.46■■□□□ 1.83
IFFO1-203ENST00000396830 NPM1P06748 294 aaKnown RBP eCLIP26.46■■□□□ 1.83
IFFO1-203ENST00000396830 FAM50AQ14320 339 aaKnown RBP26.46■■□□□ 1.83
IFFO1-203ENST00000396830 GPATCH8Q9UKJ3 1502 aaKnown RBP26.44■■□□□ 1.82
IFFO1-203ENST00000396830 ASXL2Q76L83 1435 aa26.44■■□□□ 1.82
IFFO1-203ENST00000396830 CDC42BPAQ5VT25 1732 aa26.44■■□□□ 1.82
IFFO1-203ENST00000396830 PTPN23Q9H3S7 1636 aa26.44■■□□□ 1.82
IFFO1-203ENST00000396830 WDR7Q9Y4E6 1490 aa26.43■■□□□ 1.82
IFFO1-203ENST00000396830 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.42■■□□□ 1.82
IFFO1-203ENST00000396830 TTC37Q6PGP7 1564 aa26.42■■□□□ 1.82
IFFO1-203ENST00000396830 ITSN2Q9NZM3 1697 aa26.41■■□□□ 1.82
IFFO1-203ENST00000396830 MIA2Q96PC5 1412 aa26.41■■□□□ 1.82
IFFO1-203ENST00000396830 SETD5Q9C0A6 1442 aa26.41■■□□□ 1.82
IFFO1-203ENST00000396830 ITGAEP38570 1179 aa26.39■■□□□ 1.82
IFFO1-203ENST00000396830 TCOF1Q13428 1488 aaKnown RBP26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms