RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 PRXQ9BXM0 1461 aa29.85■■■□□ 2.37
TNFSF13-204ENST00000396542 KIAA0586Q9BVV6 1533 aa29.84■■■□□ 2.37
TNFSF13-204ENST00000396542 ARAP1Q96P48 1450 aa29.8■■■□□ 2.36
TNFSF13-204ENST00000396542 CSRNP3Q8WYN3 585 aa29.77■■■□□ 2.36
TNFSF13-204ENST00000396542 ERCC6L2Q5T890 1561 aa29.77■■■□□ 2.36
TNFSF13-204ENST00000396542 JPH4Q96JJ6 628 aa29.73■■■□□ 2.35
TNFSF13-204ENST00000396542 IQGAP2Q13576 1575 aa29.71■■■□□ 2.35
TNFSF13-204ENST00000396542 PRG4Q92954 1404 aaPredicted RBP29.7■■■□□ 2.34
TNFSF13-204ENST00000396542 CTTNBP2Q8WZ74 1663 aa29.68■■■□□ 2.34
TNFSF13-204ENST00000396542 CYB5RLQ6IPT4 315 aa29.65■■■□□ 2.34
TNFSF13-204ENST00000396542 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
TNFSF13-204ENST00000396542 KIF21BO75037 1637 aa29.61■■■□□ 2.33
TNFSF13-204ENST00000396542 UGGT2Q9NYU1 1516 aa29.56■■■□□ 2.32
TNFSF13-204ENST00000396542 DISP1Q96F81 1524 aa29.5■■■□□ 2.31
TNFSF13-204ENST00000396542 CARMIL2Q6F5E8 1435 aa29.48■■■□□ 2.31
TNFSF13-204ENST00000396542 KIAA0556O60303 1618 aa29.43■■■□□ 2.3
TNFSF13-204ENST00000396542 TNIKQ9UKE5 1360 aa29.39■■■□□ 2.29
TNFSF13-204ENST00000396542 GOLGA3Q08378 1498 aa29.38■■■□□ 2.29
TNFSF13-204ENST00000396542 PTPRGP23470 1445 aa29.34■■■□□ 2.29
TNFSF13-204ENST00000396542 SAMD9Q5K651 1589 aa29.3■■■□□ 2.28
TNFSF13-204ENST00000396542 ADCY10Q96PN6 1610 aa29.3■■■□□ 2.28
TNFSF13-204ENST00000396542 UBTFP17480 764 aaKnown RBP29.2■■■□□ 2.26
TNFSF13-204ENST00000396542 UHRF1BP1LA0JNW5 1464 aa29.19■■■□□ 2.26
TNFSF13-204ENST00000396542 EHMT2Q96KQ7 1210 aa29.19■■■□□ 2.26
TNFSF13-204ENST00000396542 TTBK1Q5TCY1 1321 aaPredicted RBP29.18■■■□□ 2.26
TNFSF13-204ENST00000396542 UACAQ9BZF9 1416 aa29.17■■■□□ 2.26
TNFSF13-204ENST00000396542 EFCAB5A4FU69 1503 aa29.16■■■□□ 2.26
TNFSF13-204ENST00000396542 ABCC2Q92887 1545 aa29.15■■■□□ 2.26
TNFSF13-204ENST00000396542 ABCA8O94911 1581 aa29.11■■■□□ 2.25
TNFSF13-204ENST00000396542 MAPKBP1O60336 1514 aa29.1■■■□□ 2.25
TNFSF13-204ENST00000396542 P3H3Q8IVL6 736 aa29.09■■■□□ 2.25
TNFSF13-204ENST00000396542 PLB1Q6P1J6 1458 aa29.09■■■□□ 2.25
TNFSF13-204ENST00000396542 RANGAP1P46060 587 aaPredicted RBP29.07■■■□□ 2.24
TNFSF13-204ENST00000396542 NPM1P06748 294 aaKnown RBP eCLIP29.06■■■□□ 2.24
TNFSF13-204ENST00000396542 KDM5BQ9UGL1 1544 aa29.04■■■□□ 2.24
TNFSF13-204ENST00000396542 FHOD3Q2V2M9 1422 aa29.04■■■□□ 2.24
TNFSF13-204ENST00000396542 ARHGAP35Q9NRY4 1499 aa29.01■■■□□ 2.23
TNFSF13-204ENST00000396542 ZCCHC11Q5TAX3 1644 aaKnown RBP28.99■■■□□ 2.23
TNFSF13-204ENST00000396542 TRHP20396 242 aaPredicted RBP28.98■■■□□ 2.23
TNFSF13-204ENST00000396542 RAPGEF6Q8TEU7 1601 aa28.97■■■□□ 2.23
TNFSF13-204ENST00000396542 KIF13AQ9H1H9 1805 aa28.95■■■□□ 2.23
TNFSF13-204ENST00000396542 ABCC10Q5T3U5 1492 aa28.91■■■□□ 2.22
TNFSF13-204ENST00000396542 DIP2BQ9P265 1576 aa28.9■■■□□ 2.22
TNFSF13-204ENST00000396542 ASXL2Q76L83 1435 aa28.89■■■□□ 2.22
TNFSF13-204ENST00000396542 FMN1Q68DA7 1419 aa28.85■■■□□ 2.21
TNFSF13-204ENST00000396542 NUP153P49790 1475 aaKnown RBP28.85■■■□□ 2.21
TNFSF13-204ENST00000396542 CLIP1P30622 1438 aa28.84■■■□□ 2.21
TNFSF13-204ENST00000396542 ATP10BO94823 1461 aa28.83■■■□□ 2.21
TNFSF13-204ENST00000396542 LOC105371045A0A1W2PR82 267 aa28.78■■■□□ 2.2
TNFSF13-204ENST00000396542 WDR7Q9Y4E6 1490 aa28.78■■■□□ 2.2
TNFSF13-204ENST00000396542 GLI2P10070 1586 aa28.77■■■□□ 2.2
TNFSF13-204ENST00000396542 FAM69CQ0P6D2 419 aa28.76■■■□□ 2.19
TNFSF13-204ENST00000396542 EPRSP07814 1512 aaKnown RBP28.74■■■□□ 2.19
TNFSF13-204ENST00000396542 HECW1Q76N89 1606 aa28.74■■■□□ 2.19
TNFSF13-204ENST00000396542 CEP162Q5TB80 1403 aa28.74■■■□□ 2.19
TNFSF13-204ENST00000396542 ARID3CA6NKF2 412 aa28.71■■■□□ 2.19
TNFSF13-204ENST00000396542 PCF11O94913 1555 aaKnown RBP28.67■■■□□ 2.18
TNFSF13-204ENST00000396542 LRRIQ1Q96JM4 1722 aa28.66■■■□□ 2.18
TNFSF13-204ENST00000396542 MAP3K4Q9Y6R4 1608 aa28.65■■■□□ 2.18
TNFSF13-204ENST00000396542 CASKIN1Q8WXD9 1431 aa28.65■■■□□ 2.18
TNFSF13-204ENST00000396542 CDK13Q14004 1512 aaKnown RBP28.64■■■□□ 2.17
TNFSF13-204ENST00000396542 TSPOAP1O95153 1857 aa28.61■■■□□ 2.17
TNFSF13-204ENST00000396542 FYCO1Q9BQS8 1478 aa28.6■■■□□ 2.17
TNFSF13-204ENST00000396542 PPRC1Q5VV67 1664 aaKnown RBP28.6■■■□□ 2.17
TNFSF13-204ENST00000396542 CFAP43Q8NDM7 1665 aa28.59■■■□□ 2.17
TNFSF13-204ENST00000396542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.59■■■□□ 2.17
TNFSF13-204ENST00000396542 HNRNPUL2Q1KMD3 747 aaKnown RBP28.59■■■□□ 2.17
TNFSF13-204ENST00000396542 KCNH8Q96L42 1107 aa28.55■■■□□ 2.16
TNFSF13-204ENST00000396542 ABCA9Q8IUA7 1624 aa28.54■■■□□ 2.16
TNFSF13-204ENST00000396542 ATP1B4Q9UN42 357 aaPredicted RBP28.54■■■□□ 2.16
TNFSF13-204ENST00000396542 CCDC18Q5T9S5 1454 aa28.53■■■□□ 2.16
TNFSF13-204ENST00000396542 PLEKHD1A6NEE1 506 aa28.52■■■□□ 2.16
TNFSF13-204ENST00000396542 CD109Q6YHK3 1445 aa28.47■■■□□ 2.15
TNFSF13-204ENST00000396542 MAGI3Q5TCQ9 1506 aa28.47■■■□□ 2.15
TNFSF13-204ENST00000396542 TEX14Q8IWB6 1497 aa28.45■■■□□ 2.14
TNFSF13-204ENST00000396542 CDK11AQ9UQ88 783 aaPredicted RBP28.43■■■□□ 2.14
TNFSF13-204ENST00000396542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.42■■■□□ 2.14
TNFSF13-204ENST00000396542 TROQ12816 1431 aaPredicted RBP28.41■■■□□ 2.14
TNFSF13-204ENST00000396542 VPS8Q8N3P4 1428 aa28.41■■■□□ 2.14
TNFSF13-204ENST00000396542 TTC37Q6PGP7 1564 aa28.39■■■□□ 2.14
TNFSF13-204ENST00000396542 KDM6BO15054 1643 aa28.38■■■□□ 2.13
TNFSF13-204ENST00000396542 KIF14Q15058 1648 aa28.36■■■□□ 2.13
TNFSF13-204ENST00000396542 MYO5CQ9NQX4 1742 aa28.27■■■□□ 2.12
TNFSF13-204ENST00000396542 COL17A1Q9UMD9 1497 aaPredicted RBP28.27■■■□□ 2.12
TNFSF13-204ENST00000396542 NEO1Q92859 1461 aa28.26■■■□□ 2.11
TNFSF13-204ENST00000396542 TIAM1Q13009 1591 aa28.24■■■□□ 2.11
TNFSF13-204ENST00000396542 CFAP74Q9C0B2 1584 aa28.24■■■□□ 2.11
TNFSF13-204ENST00000396542 PHLDB1Q86UU1 1377 aa28.24■■■□□ 2.11
TNFSF13-204ENST00000396542 ARAP3Q8WWN8 1544 aa28.23■■■□□ 2.11
TNFSF13-204ENST00000396542 PLCH2O75038 1416 aa28.23■■■□□ 2.11
TNFSF13-204ENST00000396542 EHBP1L1Q8N3D4 1523 aa28.21■■■□□ 2.11
TNFSF13-204ENST00000396542 MAP3K1Q13233 1512 aa28.2■■■□□ 2.1
TNFSF13-204ENST00000396542 FANCAO15360 1455 aa28.2■■■□□ 2.1
TNFSF13-204ENST00000396542 MTUS2Q5JR59 1369 aa28.18■■■□□ 2.1
TNFSF13-204ENST00000396542 PREX2Q70Z35 1606 aa28.17■■■□□ 2.1
TNFSF13-204ENST00000396542 CDC42BPAQ5VT25 1732 aa28.15■■■□□ 2.1
TNFSF13-204ENST00000396542 CDC42BPBQ9Y5S2 1711 aa28.15■■■□□ 2.1
TNFSF13-204ENST00000396542 AKNAQ7Z591 1439 aa28.13■■■□□ 2.09
TNFSF13-204ENST00000396542 LRRC9Q6ZRR7 1453 aa28.09■■■□□ 2.09
TNFSF13-204ENST00000396542 ARHGAP5Q13017 1502 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms