RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 NISCHQ9Y2I1 1504 aa43.19■■■■■ 4.5
TNFSF13-204ENST00000396542 CCDC180Q9P1Z9 1646 aa38.41■■■■□ 3.74
TNFSF13-204ENST00000396542 ABCC9O60706 1549 aa37.34■■■■□ 3.57
TNFSF13-204ENST00000396542 NACADO15069 1562 aa36.04■■■■□ 3.36
TNFSF13-204ENST00000396542 RB1CC1Q8TDY2 1594 aa36.03■■■■□ 3.36
TNFSF13-204ENST00000396542 ZCCHC6Q5VYS8 1495 aaKnown RBP36.02■■■■□ 3.36
TNFSF13-204ENST00000396542 MYO15BQ96JP2 1530 aa35.9■■■■□ 3.34
TNFSF13-204ENST00000396542 DCAF8L2P0C7V8 631 aa35.85■■■■□ 3.33
TNFSF13-204ENST00000396542 DCAF1Q9Y4B6 1507 aa35.79■■■■□ 3.32
TNFSF13-204ENST00000396542 UNC13AQ9UPW8 1703 aa35.29■■■■□ 3.24
TNFSF13-204ENST00000396542 BICRAQ9NZM4 1560 aa34.98■■■■□ 3.19
TNFSF13-204ENST00000396542 SCRIBQ14160 1630 aa34.97■■■■□ 3.19
TNFSF13-204ENST00000396542 PABPN1Q86U42 306 aaKnown RBP eCLIP34.86■■■■□ 3.17
TNFSF13-204ENST00000396542 SHROOM4Q9ULL8 1493 aa34.63■■■■□ 3.13
TNFSF13-204ENST00000396542 DNAJC5BQ9UF47 199 aa34.15■■■■□ 3.06
TNFSF13-204ENST00000396542 EIF4G1Q04637 1599 aaKnown RBP34.02■■■■□ 3.04
TNFSF13-204ENST00000396542 CC2D2AQ9P2K1 1620 aa33.84■■■■□ 3.01
TNFSF13-204ENST00000396542 CECR2Q9BXF3 1484 aa33.61■■■□□ 2.97
TNFSF13-204ENST00000396542 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
TNFSF13-204ENST00000396542 BAZ1AQ9NRL2 1556 aaPredicted RBP33.47■■■□□ 2.95
TNFSF13-204ENST00000396542 MROH2BQ7Z745 1585 aa33.28■■■□□ 2.92
TNFSF13-204ENST00000396542 ATAD2BQ9ULI0 1458 aa33.26■■■□□ 2.92
TNFSF13-204ENST00000396542 SMARCA2P51531 1590 aa33.24■■■□□ 2.91
TNFSF13-204ENST00000396542 NCAPD3P42695 1498 aa33.24■■■□□ 2.91
TNFSF13-204ENST00000396542 PEG3Q9GZU2 1588 aa33.21■■■□□ 2.91
TNFSF13-204ENST00000396542 HMGXB3Q12766 1538 aa33.11■■■□□ 2.89
TNFSF13-204ENST00000396542 BAZ1BQ9UIG0 1483 aaKnown RBP32.97■■■□□ 2.87
TNFSF13-204ENST00000396542 WIZO95785 1651 aa32.94■■■□□ 2.86
TNFSF13-204ENST00000396542 RSF1Q96T23 1441 aaPredicted RBP32.93■■■□□ 2.86
TNFSF13-204ENST00000396542 TOP2AP11388 1531 aaKnown RBP32.61■■■□□ 2.81
TNFSF13-204ENST00000396542 NESP48681 1621 aa32.37■■■□□ 2.77
TNFSF13-204ENST00000396542 LAMC3Q9Y6N6 1575 aa32.36■■■□□ 2.77
TNFSF13-204ENST00000396542 CADPSQ9ULU8 1353 aa32.23■■■□□ 2.75
TNFSF13-204ENST00000396542 CCDC88BA6NC98 1476 aa32.18■■■□□ 2.74
TNFSF13-204ENST00000396542 ERCC6Q03468 1493 aa32.16■■■□□ 2.74
TNFSF13-204ENST00000396542 CFTRP13569 1480 aa32.11■■■□□ 2.73
TNFSF13-204ENST00000396542 PDS5BQ9NTI5 1447 aa32.08■■■□□ 2.73
TNFSF13-204ENST00000396542 SUPT5HO00267 1087 aaKnown RBP32.06■■■□□ 2.72
TNFSF13-204ENST00000396542 KIF21AQ7Z4S6 1674 aa32.05■■■□□ 2.72
TNFSF13-204ENST00000396542 PRDM2Q13029 1718 aa31.96■■■□□ 2.71
TNFSF13-204ENST00000396542 THOC2Q8NI27 1593 aaKnown RBP31.92■■■□□ 2.7
TNFSF13-204ENST00000396542 FANCD2Q9BXW9 1451 aa31.87■■■□□ 2.69
TNFSF13-204ENST00000396542 CUX2O14529 1486 aa31.84■■■□□ 2.69
TNFSF13-204ENST00000396542 CEP164Q9UPV0 1460 aa31.83■■■□□ 2.69
TNFSF13-204ENST00000396542 MRC2Q9UBG0 1479 aa31.76■■■□□ 2.67
TNFSF13-204ENST00000396542 WDR62O43379 1518 aa31.7■■■□□ 2.66
TNFSF13-204ENST00000396542 URB2Q14146 1524 aaKnown RBP31.57■■■□□ 2.64
TNFSF13-204ENST00000396542 ABCC8Q09428 1581 aa31.4■■■□□ 2.62
TNFSF13-204ENST00000396542 TOPBP1Q92547 1522 aa31.39■■■□□ 2.62
TNFSF13-204ENST00000396542 DNMBPQ6XZF7 1577 aa31.39■■■□□ 2.62
TNFSF13-204ENST00000396542 CUX1P39880 1505 aa31.21■■■□□ 2.59
TNFSF13-204ENST00000396542 IFT140Q96RY7 1462 aa31.16■■■□□ 2.58
TNFSF13-204ENST00000396542 POLA1P09884 1462 aaPredicted RBP31.14■■■□□ 2.58
TNFSF13-204ENST00000396542 TARBP1Q13395 1621 aaKnown RBP31.09■■■□□ 2.57
TNFSF13-204ENST00000396542 FGD5Q6ZNL6 1462 aa31.08■■■□□ 2.57
TNFSF13-204ENST00000396542 BIVM-ERCC5R4GMW8 1640 aa31.02■■■□□ 2.56
TNFSF13-204ENST00000396542 WRNQ14191 1432 aaPredicted RBP eCLIP31.02■■■□□ 2.56
TNFSF13-204ENST00000396542 TOP2BQ02880 1626 aa31.01■■■□□ 2.55
TNFSF13-204ENST00000396542 ZNF608Q9ULD9 1512 aaPredicted RBP31■■■□□ 2.55
TNFSF13-204ENST00000396542 SYNJ1O43426 1573 aa31■■■□□ 2.55
TNFSF13-204ENST00000396542 SOGA1O94964 1423 aa30.98■■■□□ 2.55
TNFSF13-204ENST00000396542 RAD54L2Q9Y4B4 1467 aa30.97■■■□□ 2.55
TNFSF13-204ENST00000396542 EIF4G3O43432 1585 aaKnown RBP30.93■■■□□ 2.54
TNFSF13-204ENST00000396542 WDR97A6NE52 1622 aa30.9■■■□□ 2.54
TNFSF13-204ENST00000396542 AQRO60306 1485 aaKnown RBP eCLIP30.82■■■□□ 2.52
TNFSF13-204ENST00000396542 ABCA10Q8WWZ4 1543 aa30.79■■■□□ 2.52
TNFSF13-204ENST00000396542 TDRD9Q8NDG6 1382 aaKnown RBP30.77■■■□□ 2.52
TNFSF13-204ENST00000396542 ABCA5Q8WWZ7 1642 aa30.71■■■□□ 2.51
TNFSF13-204ENST00000396542 DNAJC5Q9H3Z4 198 aa30.66■■■□□ 2.5
TNFSF13-204ENST00000396542 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
TNFSF13-204ENST00000396542 PBRM1Q86U86 1689 aa30.63■■■□□ 2.49
TNFSF13-204ENST00000396542 GRIN2BQ13224 1484 aa30.63■■■□□ 2.49
TNFSF13-204ENST00000396542 SNAPC4Q5SXM2 1469 aa30.56■■■□□ 2.48
TNFSF13-204ENST00000396542 MAGI1Q96QZ7 1491 aaPredicted RBP30.55■■■□□ 2.48
TNFSF13-204ENST00000396542 CHD1O14646 1710 aa30.53■■■□□ 2.48
TNFSF13-204ENST00000396542 OSCARQ8IYS5 282 aa30.46■■■□□ 2.47
TNFSF13-204ENST00000396542 ERICH3Q5RHP9 1530 aa30.44■■■□□ 2.46
TNFSF13-204ENST00000396542 SYNJ2O15056 1496 aa30.42■■■□□ 2.46
TNFSF13-204ENST00000396542 ADAMTS12P58397 1594 aa30.38■■■□□ 2.45
TNFSF13-204ENST00000396542 KIF27Q86VH2 1401 aa30.36■■■□□ 2.45
TNFSF13-204ENST00000396542 FBLN2P98095 1184 aa30.33■■■□□ 2.45
TNFSF13-204ENST00000396542 CHMP7Q8WUX9 453 aaPredicted RBP30.31■■■□□ 2.44
TNFSF13-204ENST00000396542 TRIM41Q8WV44 630 aa30.3■■■□□ 2.44
TNFSF13-204ENST00000396542 FHAD1B1AJZ9 1412 aa30.29■■■□□ 2.44
TNFSF13-204ENST00000396542 GRIN2AQ12879 1464 aa30.25■■■□□ 2.43
TNFSF13-204ENST00000396542 IGF1RP08069 1367 aa30.23■■■□□ 2.43
TNFSF13-204ENST00000396542 CUL7Q14999 1698 aa30.2■■■□□ 2.43
TNFSF13-204ENST00000396542 CLASP1Q7Z460 1538 aa30.2■■■□□ 2.42
TNFSF13-204ENST00000396542 RUSC2Q8N2Y8 1516 aa30.14■■■□□ 2.42
TNFSF13-204ENST00000396542 NUP160Q12769 1436 aa30.12■■■□□ 2.41
TNFSF13-204ENST00000396542 CEP170Q5SW79 1584 aa30.11■■■□□ 2.41
TNFSF13-204ENST00000396542 CHIC1Q5VXU3 224 aa30.05■■■□□ 2.4
TNFSF13-204ENST00000396542 RIMBP3CA6NJZ7 1639 aa30.04■■■□□ 2.4
TNFSF13-204ENST00000396542 RIMBP3BA6NNM3 1639 aa30.04■■■□□ 2.4
TNFSF13-204ENST00000396542 RIMBP3Q9UFD9 1639 aa30.04■■■□□ 2.4
TNFSF13-204ENST00000396542 ARHGEF11O15085 1522 aa30.04■■■□□ 2.4
TNFSF13-204ENST00000396542 CARMIL1Q5VZK9 1371 aa30.03■■■□□ 2.4
TNFSF13-204ENST00000396542 SHROOM2Q13796 1616 aa29.93■■■□□ 2.38
TNFSF13-204ENST00000396542 RAPGEF2Q9Y4G8 1499 aa29.89■■■□□ 2.38
TNFSF13-204ENST00000396542 EEA1Q15075 1411 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms