RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 THOC2Q8NI27 1593 aaKnown RBP23.83■■□□□ 1.41
CCHCR1-202ENST00000396263 ABCA5Q8WWZ7 1642 aa23.81■■□□□ 1.4
CCHCR1-202ENST00000396263 ARHGAP35Q9NRY4 1499 aa23.79■■□□□ 1.4
CCHCR1-202ENST00000396263 TDRD9Q8NDG6 1382 aaKnown RBP23.77■■□□□ 1.4
CCHCR1-202ENST00000396263 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
CCHCR1-202ENST00000396263 KANK4Q5T7N3 995 aaPredicted RBP23.74■■□□□ 1.39
CCHCR1-202ENST00000396263 RRBP1Q9P2E9 1410 aaKnown RBP23.74■■□□□ 1.39
CCHCR1-202ENST00000396263 CLSPNQ9HAW4 1339 aa23.72■■□□□ 1.39
CCHCR1-202ENST00000396263 GAPVD1Q14C86 1478 aa23.72■■□□□ 1.39
CCHCR1-202ENST00000396263 GTF3C3Q9Y5Q9 886 aa23.7■■□□□ 1.38
CCHCR1-202ENST00000396263 CUL7Q14999 1698 aa23.7■■□□□ 1.38
CCHCR1-202ENST00000396263 CENPBP07199 599 aaPredicted RBP23.69■■□□□ 1.38
CCHCR1-202ENST00000396263 IFT140Q96RY7 1462 aa23.67■■□□□ 1.38
CCHCR1-202ENST00000396263 PBRM1Q86U86 1689 aa23.65■■□□□ 1.38
CCHCR1-202ENST00000396263 DHX57Q6P158 1386 aaKnown RBP23.64■■□□□ 1.38
CCHCR1-202ENST00000396263 AQRO60306 1485 aaKnown RBP eCLIP23.63■■□□□ 1.372e-10■■■■■ 47.9
CCHCR1-202ENST00000396263 MAP3K1Q13233 1512 aa23.62■■□□□ 1.37
CCHCR1-202ENST00000396263 ZNF608Q9ULD9 1512 aaPredicted RBP23.62■■□□□ 1.37
CCHCR1-202ENST00000396263 CCNB3Q8WWL7 1395 aa23.58■■□□□ 1.37
CCHCR1-202ENST00000396263 TIAM1Q13009 1591 aa23.57■■□□□ 1.36
CCHCR1-202ENST00000396263 EIF4G3O43432 1585 aaKnown RBP23.54■■□□□ 1.36
CCHCR1-202ENST00000396263 GRIN2BQ13224 1484 aa23.51■■□□□ 1.35
CCHCR1-202ENST00000396263 ADAMTS12P58397 1594 aa23.5■■□□□ 1.35
CCHCR1-202ENST00000396263 CTTNBP2Q8WZ74 1663 aa23.49■■□□□ 1.35
CCHCR1-202ENST00000396263 FHAD1B1AJZ9 1412 aa23.47■■□□□ 1.35
CCHCR1-202ENST00000396263 MIER1Q8N108 512 aa23.45■■□□□ 1.35
CCHCR1-202ENST00000396263 LRRC9Q6ZRR7 1453 aa23.45■■□□□ 1.34
CCHCR1-202ENST00000396263 CFAP43Q8NDM7 1665 aa23.44■■□□□ 1.34
CCHCR1-202ENST00000396263 SNAPC4Q5SXM2 1469 aa23.4■■□□□ 1.34
CCHCR1-202ENST00000396263 PCF11O94913 1555 aaKnown RBP23.39■■□□□ 1.33
CCHCR1-202ENST00000396263 EFCAB5A4FU69 1503 aa23.38■■□□□ 1.33
CCHCR1-202ENST00000396263 PHLDB1Q86UU1 1377 aa23.33■■□□□ 1.32
CCHCR1-202ENST00000396263 RAB3GAP2Q9H2M9 1393 aa23.33■■□□□ 1.32
CCHCR1-202ENST00000396263 FYCO1Q9BQS8 1478 aa23.32■■□□□ 1.32
CCHCR1-202ENST00000396263 MAGI1Q96QZ7 1491 aaPredicted RBP23.3■■□□□ 1.32
CCHCR1-202ENST00000396263 ITGAEP38570 1179 aa23.29■■□□□ 1.32
CCHCR1-202ENST00000396263 YTHDC1Q96MU7 727 aaKnown RBP23.29■■□□□ 1.32
CCHCR1-202ENST00000396263 FHOD3Q2V2M9 1422 aa23.28■■□□□ 1.32
CCHCR1-202ENST00000396263 CASKIN1Q8WXD9 1431 aa23.28■■□□□ 1.32
CCHCR1-202ENST00000396263 SETD5Q9C0A6 1442 aa23.28■■□□□ 1.32
CCHCR1-202ENST00000396263 MAPKBP1O60336 1514 aa23.28■■□□□ 1.32
CCHCR1-202ENST00000396263 GRIN2AQ12879 1464 aa23.26■■□□□ 1.31
CCHCR1-202ENST00000396263 P3H3Q8IVL6 736 aa23.24■■□□□ 1.31
CCHCR1-202ENST00000396263 SAMD9Q5K651 1589 aa23.24■■□□□ 1.31
CCHCR1-202ENST00000396263 SYNJ2O15056 1496 aa23.23■■□□□ 1.31
CCHCR1-202ENST00000396263 IQGAP2Q13576 1575 aa23.22■■□□□ 1.31
CCHCR1-202ENST00000396263 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.2■■□□□ 1.33e-6■■■■□ 26.4
CCHCR1-202ENST00000396263 FMN1Q68DA7 1419 aa23.19■■□□□ 1.3
CCHCR1-202ENST00000396263 CEP170Q5SW79 1584 aa23.15■■□□□ 1.3
CCHCR1-202ENST00000396263 FAM50AQ14320 339 aaKnown RBP23.15■■□□□ 1.3
CCHCR1-202ENST00000396263 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
CCHCR1-202ENST00000396263 ATP1B4Q9UN42 357 aaPredicted RBP23.13■■□□□ 1.29
CCHCR1-202ENST00000396263 KIAA0586Q9BVV6 1533 aa23.12■■□□□ 1.29
CCHCR1-202ENST00000396263 FBLN2P98095 1184 aa23.12■■□□□ 1.29
CCHCR1-202ENST00000396263 UGGT2Q9NYU1 1516 aa23.09■■□□□ 1.29
CCHCR1-202ENST00000396263 NUP160Q12769 1436 aa23.07■■□□□ 1.28
CCHCR1-202ENST00000396263 FGD6Q6ZV73 1430 aa23.06■■□□□ 1.28
CCHCR1-202ENST00000396263 CHD1O14646 1710 aa23.05■■□□□ 1.28
CCHCR1-202ENST00000396263 LRRIQ1Q96JM4 1722 aa23.04■■□□□ 1.28
CCHCR1-202ENST00000396263 TIMELESSQ9UNS1 1208 aa23.03■■□□□ 1.28
CCHCR1-202ENST00000396263 DISP1Q96F81 1524 aa23.01■■□□□ 1.27
CCHCR1-202ENST00000396263 KIAA0556O60303 1618 aa23■■□□□ 1.27
CCHCR1-202ENST00000396263 MTUS2Q5JR59 1369 aa23■■□□□ 1.27
CCHCR1-202ENST00000396263 SIN3AQ96ST3 1273 aa22.96■■□□□ 1.27
CCHCR1-202ENST00000396263 SUPT6HQ7KZ85 1726 aaKnown RBP22.95■■□□□ 1.26
CCHCR1-202ENST00000396263 EHBP1L1Q8N3D4 1523 aa22.94■■□□□ 1.26
CCHCR1-202ENST00000396263 NCOA2Q15596 1464 aa22.94■■□□□ 1.26
CCHCR1-202ENST00000396263 HFM1A2PYH4 1435 aa22.93■■□□□ 1.26
CCHCR1-202ENST00000396263 MYOM3Q5VTT5 1437 aa22.92■■□□□ 1.26
CCHCR1-202ENST00000396263 CCDC18Q5T9S5 1454 aa22.91■■□□□ 1.26
CCHCR1-202ENST00000396263 PTPN23Q9H3S7 1636 aa22.9■■□□□ 1.26
CCHCR1-202ENST00000396263 PTPRKQ15262 1439 aa22.89■■□□□ 1.26
CCHCR1-202ENST00000396263 ARHGEF11O15085 1522 aa22.89■■□□□ 1.25
CCHCR1-202ENST00000396263 JPH4Q96JJ6 628 aa22.87■■□□□ 1.25
CCHCR1-202ENST00000396263 UACAQ9BZF9 1416 aa22.87■■□□□ 1.25
CCHCR1-202ENST00000396263 HECW1Q76N89 1606 aa22.85■■□□□ 1.25
CCHCR1-202ENST00000396263 PPP1R15AO75807 674 aaPredicted RBP22.85■■□□□ 1.25
CCHCR1-202ENST00000396263 NAIPQ13075 1403 aa22.83■■□□□ 1.25
CCHCR1-202ENST00000396263 MAGI3Q5TCQ9 1506 aa22.82■■□□□ 1.24
CCHCR1-202ENST00000396263 CARMIL2Q6F5E8 1435 aa22.8■■□□□ 1.24
CCHCR1-202ENST00000396263 TCOF1Q13428 1488 aaKnown RBP22.79■■□□□ 1.24
CCHCR1-202ENST00000396263 RAPGEF6Q8TEU7 1601 aa22.78■■□□□ 1.24
CCHCR1-202ENST00000396263 SHROOM2Q13796 1616 aa22.77■■□□□ 1.24
CCHCR1-202ENST00000396263 EPRSP07814 1512 aaKnown RBP22.77■■□□□ 1.24
CCHCR1-202ENST00000396263 CDK13Q14004 1512 aaKnown RBP22.76■■□□□ 1.23
CCHCR1-202ENST00000396263 PRG4Q92954 1404 aaPredicted RBP22.75■■□□□ 1.23
CCHCR1-202ENST00000396263 TONSLQ96HA7 1378 aa22.75■■□□□ 1.23
CCHCR1-202ENST00000396263 NUP153P49790 1475 aaKnown RBP22.73■■□□□ 1.23
CCHCR1-202ENST00000396263 CLASP1Q7Z460 1538 aa22.73■■□□□ 1.23
CCHCR1-202ENST00000396263 GCC2Q8IWJ2 1684 aa22.73■■□□□ 1.23
CCHCR1-202ENST00000396263 DDX10Q13206 875 aaKnown RBP22.73■■□□□ 1.23
CCHCR1-202ENST00000396263 PLB1Q6P1J6 1458 aa22.72■■□□□ 1.23
CCHCR1-202ENST00000396263 AKNAQ7Z591 1439 aa22.71■■□□□ 1.23
CCHCR1-202ENST00000396263 ARID3CA6NKF2 412 aa22.71■■□□□ 1.23
CCHCR1-202ENST00000396263 KCNH8Q96L42 1107 aa22.68■■□□□ 1.22
CCHCR1-202ENST00000396263 MIA2Q96PC5 1412 aa22.68■■□□□ 1.22
CCHCR1-202ENST00000396263 ERCC6L2Q5T890 1561 aa22.68■■□□□ 1.22
CCHCR1-202ENST00000396263 SUPT16HQ9Y5B9 1047 aaKnown RBP22.67■■□□□ 1.22
CCHCR1-202ENST00000396263 ABCA8O94911 1581 aa22.65■■□□□ 1.22
CCHCR1-202ENST00000396263 KDM5BQ9UGL1 1544 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms