RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 NISCHQ9Y2I1 1504 aa33.86■■■■□ 3.01
CCHCR1-202ENST00000396263 CCDC180Q9P1Z9 1646 aa29.5■■■□□ 2.31
CCHCR1-202ENST00000396263 ZCCHC6Q5VYS8 1495 aaKnown RBP28.47■■■□□ 2.15
CCHCR1-202ENST00000396263 SHROOM4Q9ULL8 1493 aa28.17■■■□□ 2.1
CCHCR1-202ENST00000396263 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
CCHCR1-202ENST00000396263 DCAF1Q9Y4B6 1507 aa27.94■■■□□ 2.06
CCHCR1-202ENST00000396263 ABCC9O60706 1549 aa27.92■■■□□ 2.06
CCHCR1-202ENST00000396263 SUPT5HO00267 1087 aaKnown RBP27.62■■■□□ 2.01
CCHCR1-202ENST00000396263 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
CCHCR1-202ENST00000396263 NACADO15069 1562 aa27.43■■□□□ 1.98
CCHCR1-202ENST00000396263 SCRIBQ14160 1630 aa27.21■■□□□ 1.95
CCHCR1-202ENST00000396263 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.95
CCHCR1-202ENST00000396263 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
CCHCR1-202ENST00000396263 UNC13AQ9UPW8 1703 aa26.79■■□□□ 1.88
CCHCR1-202ENST00000396263 BICRAQ9NZM4 1560 aa26.46■■□□□ 1.83
CCHCR1-202ENST00000396263 RSF1Q96T23 1441 aaPredicted RBP26.37■■□□□ 1.81
CCHCR1-202ENST00000396263 CECR2Q9BXF3 1484 aa26.37■■□□□ 1.81
CCHCR1-202ENST00000396263 PABPN1Q86U42 306 aaKnown RBP eCLIP26.33■■□□□ 1.81
CCHCR1-202ENST00000396263 MROH2BQ7Z745 1585 aa26.21■■□□□ 1.79
CCHCR1-202ENST00000396263 BAZ1AQ9NRL2 1556 aaPredicted RBP26.13■■□□□ 1.77
CCHCR1-202ENST00000396263 HRCP23327 699 aa26.09■■□□□ 1.77
CCHCR1-202ENST00000396263 LOC105371045A0A1W2PR82 267 aa26.05■■□□□ 1.76
CCHCR1-202ENST00000396263 SMARCA4P51532 1647 aa26.05■■□□□ 1.76
CCHCR1-202ENST00000396263 WIZO95785 1651 aa26.03■■□□□ 1.76
CCHCR1-202ENST00000396263 PCGF6Q9BYE7 350 aa25.99■■□□□ 1.75
CCHCR1-202ENST00000396263 TRIM41Q8WV44 630 aa25.82■■□□□ 1.72
CCHCR1-202ENST00000396263 PEG3Q9GZU2 1588 aa25.69■■□□□ 1.7
CCHCR1-202ENST00000396263 TOP2AP11388 1531 aaKnown RBP25.69■■□□□ 1.7
CCHCR1-202ENST00000396263 TRIM26Q12899 539 aaPredicted RBP25.64■■□□□ 1.69
CCHCR1-202ENST00000396263 EIF4G1Q04637 1599 aaKnown RBP25.64■■□□□ 1.69
CCHCR1-202ENST00000396263 ATAD2BQ9ULI0 1458 aa25.59■■□□□ 1.69
CCHCR1-202ENST00000396263 SMARCA2P51531 1590 aa25.54■■□□□ 1.68
CCHCR1-202ENST00000396263 FAM9AQ8IZU1 332 aaPredicted RBP25.47■■□□□ 1.67
CCHCR1-202ENST00000396263 CCDC88BA6NC98 1476 aa25.44■■□□□ 1.66
CCHCR1-202ENST00000396263 BAZ1BQ9UIG0 1483 aaKnown RBP25.44■■□□□ 1.66
CCHCR1-202ENST00000396263 PPARGC1BQ86YN6 1023 aaKnown RBP25.39■■□□□ 1.65
CCHCR1-202ENST00000396263 NCAPD3P42695 1498 aa25.32■■□□□ 1.64
CCHCR1-202ENST00000396263 HMGXB3Q12766 1538 aa25.31■■□□□ 1.64
CCHCR1-202ENST00000396263 CC2D2AQ9P2K1 1620 aa25.26■■□□□ 1.63
CCHCR1-202ENST00000396263 ABCC8Q09428 1581 aa25.13■■□□□ 1.61
CCHCR1-202ENST00000396263 EHMT2Q96KQ7 1210 aa25.13■■□□□ 1.61
CCHCR1-202ENST00000396263 ZEB1P37275 1124 aaPredicted RBP25.13■■□□□ 1.61
CCHCR1-202ENST00000396263 PELP1Q8IZL8 1130 aaKnown RBP25■■□□□ 1.59
CCHCR1-202ENST00000396263 EEA1Q15075 1411 aa24.92■■□□□ 1.58
CCHCR1-202ENST00000396263 SOGA1O94964 1423 aa24.88■■□□□ 1.57
CCHCR1-202ENST00000396263 WRNQ14191 1432 aaPredicted RBP eCLIP24.87■■□□□ 1.57
CCHCR1-202ENST00000396263 TNIKQ9UKE5 1360 aa24.82■■□□□ 1.56
CCHCR1-202ENST00000396263 CEP162Q5TB80 1403 aa24.8■■□□□ 1.56
CCHCR1-202ENST00000396263 CFTRP13569 1480 aa24.79■■□□□ 1.56
CCHCR1-202ENST00000396263 CSRNP3Q8WYN3 585 aa24.76■■□□□ 1.55
CCHCR1-202ENST00000396263 RUSC2Q8N2Y8 1516 aa24.75■■□□□ 1.55
CCHCR1-202ENST00000396263 PRDM2Q13029 1718 aa24.72■■□□□ 1.55
CCHCR1-202ENST00000396263 SYNJ1O43426 1573 aa24.7■■□□□ 1.54
CCHCR1-202ENST00000396263 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
CCHCR1-202ENST00000396263 GOLGA3Q08378 1498 aa24.68■■□□□ 1.54
CCHCR1-202ENST00000396263 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
CCHCR1-202ENST00000396263 KIF21BO75037 1637 aa24.59■■□□□ 1.53
CCHCR1-202ENST00000396263 UBTFP17480 764 aaKnown RBP24.57■■□□□ 1.52
CCHCR1-202ENST00000396263 SCAF1Q9H7N4 1312 aaKnown RBP24.57■■□□□ 1.52
CCHCR1-202ENST00000396263 CEP164Q9UPV0 1460 aa24.56■■□□□ 1.52
CCHCR1-202ENST00000396263 NESP48681 1621 aa24.55■■□□□ 1.52
CCHCR1-202ENST00000396263 TOP2BQ02880 1626 aa24.55■■□□□ 1.52
CCHCR1-202ENST00000396263 BIVM-ERCC5R4GMW8 1640 aa24.53■■□□□ 1.52
CCHCR1-202ENST00000396263 CUX1P39880 1505 aa24.5■■□□□ 1.51
CCHCR1-202ENST00000396263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.5■■□□□ 1.51
CCHCR1-202ENST00000396263 LAMC3Q9Y6N6 1575 aa24.47■■□□□ 1.51
CCHCR1-202ENST00000396263 CCER1Q8TC90 406 aaPredicted RBP24.47■■□□□ 1.51
CCHCR1-202ENST00000396263 FANCD2Q9BXW9 1451 aa24.44■■□□□ 1.5
CCHCR1-202ENST00000396263 TTBK1Q5TCY1 1321 aaPredicted RBP24.35■■□□□ 1.49
CCHCR1-202ENST00000396263 CLIP1P30622 1438 aa24.35■■□□□ 1.49
CCHCR1-202ENST00000396263 RAPGEF2Q9Y4G8 1499 aa24.31■■□□□ 1.48
CCHCR1-202ENST00000396263 VPS8Q8N3P4 1428 aa24.28■■□□□ 1.48
CCHCR1-202ENST00000396263 KIF21AQ7Z4S6 1674 aa24.27■■□□□ 1.48
CCHCR1-202ENST00000396263 PDS5BQ9NTI5 1447 aa24.24■■□□□ 1.47
CCHCR1-202ENST00000396263 DNMBPQ6XZF7 1577 aa24.23■■□□□ 1.47
CCHCR1-202ENST00000396263 FGD5Q6ZNL6 1462 aa24.21■■□□□ 1.47
CCHCR1-202ENST00000396263 ERICH3Q5RHP9 1530 aa24.21■■□□□ 1.47
CCHCR1-202ENST00000396263 TOPBP1Q92547 1522 aa24.2■■□□□ 1.46
CCHCR1-202ENST00000396263 URB2Q14146 1524 aaKnown RBP24.17■■□□□ 1.46
CCHCR1-202ENST00000396263 PRXQ9BXM0 1461 aa24.16■■□□□ 1.46
CCHCR1-202ENST00000396263 POLA1P09884 1462 aaPredicted RBP24.09■■□□□ 1.45
CCHCR1-202ENST00000396263 KIF27Q86VH2 1401 aa24.07■■□□□ 1.44
CCHCR1-202ENST00000396263 APLP2Q06481 763 aa24.05■■□□□ 1.44
CCHCR1-202ENST00000396263 CUX2O14529 1486 aa24.05■■□□□ 1.44
CCHCR1-202ENST00000396263 RAD54L2Q9Y4B4 1467 aa24.04■■□□□ 1.44
CCHCR1-202ENST00000396263 MYT1Q01538 1121 aa24.01■■□□□ 1.43
CCHCR1-202ENST00000396263 DIEXFQ68CQ4 756 aaKnown RBP24■■□□□ 1.43
CCHCR1-202ENST00000396263 ARAP1Q96P48 1450 aa23.99■■□□□ 1.43
CCHCR1-202ENST00000396263 MRC2Q9UBG0 1479 aa23.97■■□□□ 1.43
CCHCR1-202ENST00000396263 ABCA10Q8WWZ4 1543 aa23.96■■□□□ 1.43
CCHCR1-202ENST00000396263 HNRNPUL2Q1KMD3 747 aaKnown RBP23.95■■□□□ 1.43
CCHCR1-202ENST00000396263 WDR97A6NE52 1622 aa23.95■■□□□ 1.42
CCHCR1-202ENST00000396263 RANGAP1P46060 587 aaPredicted RBP23.92■■□□□ 1.42
CCHCR1-202ENST00000396263 ERCC6Q03468 1493 aa23.88■■□□□ 1.41
CCHCR1-202ENST00000396263 IGF1RP08069 1367 aa23.88■■□□□ 1.41
CCHCR1-202ENST00000396263 ACIN1Q9UKV3 1341 aaKnown RBP23.87■■□□□ 1.41
CCHCR1-202ENST00000396263 ZNF316A6NFI3 1004 aaPredicted RBP23.87■■□□□ 1.41
CCHCR1-202ENST00000396263 WDR62O43379 1518 aa23.87■■□□□ 1.41
CCHCR1-202ENST00000396263 TARBP1Q13395 1621 aaKnown RBP23.85■■□□□ 1.41
CCHCR1-202ENST00000396263 NEUROD1Q13562 356 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms