RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 CSRNP3Q8WYN3 585 aa33.28■■■□□ 2.92
SNCA-203ENST00000394986 PRXQ9BXM0 1461 aa33.26■■■□□ 2.92
SNCA-203ENST00000394986 KIAA0586Q9BVV6 1533 aa33.21■■■□□ 2.91
SNCA-203ENST00000394986 SHROOM2Q13796 1616 aa33.19■■■□□ 2.9
SNCA-203ENST00000394986 ERCC6L2Q5T890 1561 aa33.17■■■□□ 2.9
SNCA-203ENST00000394986 ARAP1Q96P48 1450 aa33.17■■■□□ 2.9
SNCA-203ENST00000394986 JPH4Q96JJ6 628 aa33.15■■■□□ 2.9
SNCA-203ENST00000394986 PRG4Q92954 1404 aaPredicted RBP33.11■■■□□ 2.89
SNCA-203ENST00000394986 CYB5RLQ6IPT4 315 aa33.1■■■□□ 2.89
SNCA-203ENST00000394986 IQGAP2Q13576 1575 aa33.06■■■□□ 2.88
SNCA-203ENST00000394986 KIF21BO75037 1637 aa32.97■■■□□ 2.87
SNCA-203ENST00000394986 CTTNBP2Q8WZ74 1663 aa32.96■■■□□ 2.87
SNCA-203ENST00000394986 EHMT2Q96KQ7 1210 aa32.94■■■□□ 2.86
SNCA-203ENST00000394986 UGGT2Q9NYU1 1516 aa32.88■■■□□ 2.85
SNCA-203ENST00000394986 DISP1Q96F81 1524 aa32.85■■■□□ 2.85
SNCA-203ENST00000394986 CARMIL2Q6F5E8 1435 aa32.83■■■□□ 2.85
SNCA-203ENST00000394986 GOLGA3Q08378 1498 aa32.81■■■□□ 2.84
SNCA-203ENST00000394986 TTBK1Q5TCY1 1321 aaPredicted RBP32.78■■■□□ 2.84
SNCA-203ENST00000394986 KIAA0556O60303 1618 aa32.76■■■□□ 2.84
SNCA-203ENST00000394986 TNIKQ9UKE5 1360 aa32.74■■■□□ 2.83
SNCA-203ENST00000394986 UBTFP17480 764 aaKnown RBP32.73■■■□□ 2.83
SNCA-203ENST00000394986 RANGAP1P46060 587 aaPredicted RBP32.71■■■□□ 2.83
SNCA-203ENST00000394986 PTPRGP23470 1445 aa32.71■■■□□ 2.83
SNCA-203ENST00000394986 P3H3Q8IVL6 736 aa32.62■■■□□ 2.81
SNCA-203ENST00000394986 SAMD9Q5K651 1589 aa32.59■■■□□ 2.81
SNCA-203ENST00000394986 ADCY10Q96PN6 1610 aa32.57■■■□□ 2.81
SNCA-203ENST00000394986 UACAQ9BZF9 1416 aa32.49■■■□□ 2.79
SNCA-203ENST00000394986 FHOD3Q2V2M9 1422 aa32.49■■■□□ 2.79
SNCA-203ENST00000394986 PLB1Q6P1J6 1458 aa32.46■■■□□ 2.79
SNCA-203ENST00000394986 EFCAB5A4FU69 1503 aa32.46■■■□□ 2.79
SNCA-203ENST00000394986 ABCC2Q92887 1545 aa32.44■■■□□ 2.78
SNCA-203ENST00000394986 UHRF1BP1LA0JNW5 1464 aa32.43■■■□□ 2.78
SNCA-203ENST00000394986 NPM1P06748 294 aaKnown RBP eCLIP32.4■■■□□ 2.78
SNCA-203ENST00000394986 ARHGAP35Q9NRY4 1499 aa32.39■■■□□ 2.78
SNCA-203ENST00000394986 ABCA8O94911 1581 aa32.38■■■□□ 2.77
SNCA-203ENST00000394986 TRHP20396 242 aaPredicted RBP32.36■■■□□ 2.77
SNCA-203ENST00000394986 LOC105371045A0A1W2PR82 267 aa32.35■■■□□ 2.77
SNCA-203ENST00000394986 KDM5BQ9UGL1 1544 aa32.29■■■□□ 2.76
SNCA-203ENST00000394986 MAPKBP1O60336 1514 aa32.29■■■□□ 2.76
SNCA-203ENST00000394986 ARID3CA6NKF2 412 aa32.25■■■□□ 2.75
SNCA-203ENST00000394986 CLIP1P30622 1438 aa32.25■■■□□ 2.75
SNCA-203ENST00000394986 ZCCHC11Q5TAX3 1644 aaKnown RBP32.24■■■□□ 2.75
SNCA-203ENST00000394986 RAPGEF6Q8TEU7 1601 aa32.24■■■□□ 2.75
SNCA-203ENST00000394986 ASXL2Q76L83 1435 aa32.2■■■□□ 2.74
SNCA-203ENST00000394986 NUP153P49790 1475 aaKnown RBP32.17■■■□□ 2.74
SNCA-203ENST00000394986 CEP162Q5TB80 1403 aa32.17■■■□□ 2.74
SNCA-203ENST00000394986 FMN1Q68DA7 1419 aa32.16■■■□□ 2.74
SNCA-203ENST00000394986 ABCC10Q5T3U5 1492 aa32.14■■■□□ 2.73
SNCA-203ENST00000394986 ATP10BO94823 1461 aa32.13■■■□□ 2.73
SNCA-203ENST00000394986 DIP2BQ9P265 1576 aa32.11■■■□□ 2.73
SNCA-203ENST00000394986 FAM69CQ0P6D2 419 aa32.09■■■□□ 2.73
SNCA-203ENST00000394986 KIF13AQ9H1H9 1805 aa32.07■■■□□ 2.72
SNCA-203ENST00000394986 WDR7Q9Y4E6 1490 aa32.05■■■□□ 2.72
SNCA-203ENST00000394986 ATP1B4Q9UN42 357 aaPredicted RBP32.05■■■□□ 2.72
SNCA-203ENST00000394986 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.03■■■□□ 2.72
SNCA-203ENST00000394986 HNRNPUL2Q1KMD3 747 aaKnown RBP32.03■■■□□ 2.72
SNCA-203ENST00000394986 HECW1Q76N89 1606 aa32■■■□□ 2.71
SNCA-203ENST00000394986 EPRSP07814 1512 aaKnown RBP31.99■■■□□ 2.71
SNCA-203ENST00000394986 CDK13Q14004 1512 aaKnown RBP31.99■■■□□ 2.71
SNCA-203ENST00000394986 PCF11O94913 1555 aaKnown RBP31.99■■■□□ 2.71
SNCA-203ENST00000394986 KCNH8Q96L42 1107 aa31.95■■■□□ 2.71
SNCA-203ENST00000394986 CASKIN1Q8WXD9 1431 aa31.95■■■□□ 2.71
SNCA-203ENST00000394986 GLI2P10070 1586 aa31.91■■■□□ 2.7
SNCA-203ENST00000394986 FYCO1Q9BQS8 1478 aa31.88■■■□□ 2.69
SNCA-203ENST00000394986 LRRIQ1Q96JM4 1722 aa31.86■■■□□ 2.69
SNCA-203ENST00000394986 PLEKHD1A6NEE1 506 aa31.83■■■□□ 2.69
SNCA-203ENST00000394986 TSPOAP1O95153 1857 aa31.8■■■□□ 2.68
SNCA-203ENST00000394986 MAP3K4Q9Y6R4 1608 aa31.79■■■□□ 2.68
SNCA-203ENST00000394986 CCDC18Q5T9S5 1454 aa31.78■■■□□ 2.68
SNCA-203ENST00000394986 VPS8Q8N3P4 1428 aa31.74■■■□□ 2.67
SNCA-203ENST00000394986 PPRC1Q5VV67 1664 aaKnown RBP31.74■■■□□ 2.67
SNCA-203ENST00000394986 CD109Q6YHK3 1445 aa31.73■■■□□ 2.67
SNCA-203ENST00000394986 CDK11AQ9UQ88 783 aaPredicted RBP31.72■■■□□ 2.67
SNCA-203ENST00000394986 CFAP43Q8NDM7 1665 aa31.71■■■□□ 2.67
SNCA-203ENST00000394986 ABCA9Q8IUA7 1624 aa31.7■■■□□ 2.67
SNCA-203ENST00000394986 TROQ12816 1431 aaPredicted RBP31.68■■■□□ 2.66
SNCA-203ENST00000394986 MAGI3Q5TCQ9 1506 aa31.67■■■□□ 2.66
SNCA-203ENST00000394986 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.65■■■□□ 2.66
SNCA-203ENST00000394986 TTC37Q6PGP7 1564 aa31.63■■■□□ 2.65
SNCA-203ENST00000394986 KIF14Q15058 1648 aa31.63■■■□□ 2.65
SNCA-203ENST00000394986 TEX14Q8IWB6 1497 aa31.62■■■□□ 2.65
SNCA-203ENST00000394986 KDM6BO15054 1643 aa31.53■■■□□ 2.64
SNCA-203ENST00000394986 MTUS2Q5JR59 1369 aa31.51■■■□□ 2.63
SNCA-203ENST00000394986 COL17A1Q9UMD9 1497 aaPredicted RBP31.49■■■□□ 2.63
SNCA-203ENST00000394986 TIAM1Q13009 1591 aa31.49■■■□□ 2.63
SNCA-203ENST00000394986 EHBP1L1Q8N3D4 1523 aa31.44■■■□□ 2.62
SNCA-203ENST00000394986 PLCH2O75038 1416 aa31.44■■■□□ 2.62
SNCA-203ENST00000394986 FANCAO15360 1455 aa31.42■■■□□ 2.62
SNCA-203ENST00000394986 NEO1Q92859 1461 aa31.42■■■□□ 2.62
SNCA-203ENST00000394986 MYO5CQ9NQX4 1742 aa31.39■■■□□ 2.62
SNCA-203ENST00000394986 KANK4Q5T7N3 995 aaPredicted RBP31.37■■■□□ 2.61
SNCA-203ENST00000394986 MAP3K1Q13233 1512 aa31.37■■■□□ 2.61
SNCA-203ENST00000394986 LRRC9Q6ZRR7 1453 aa31.36■■■□□ 2.61
SNCA-203ENST00000394986 AKNAQ7Z591 1439 aa31.35■■■□□ 2.61
SNCA-203ENST00000394986 ARHGAP5Q13017 1502 aa31.34■■■□□ 2.61
SNCA-203ENST00000394986 ARAP3Q8WWN8 1544 aa31.34■■■□□ 2.61
SNCA-203ENST00000394986 PHLDB1Q86UU1 1377 aa31.34■■■□□ 2.61
SNCA-203ENST00000394986 CFAP74Q9C0B2 1584 aa31.33■■■□□ 2.61
SNCA-203ENST00000394986 PREX2Q70Z35 1606 aa31.32■■■□□ 2.6
SNCA-203ENST00000394986 APLP2Q06481 763 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms