RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 IFT140Q96RY7 1462 aa28.2■■■□□ 2.11
SIL1-202ENST00000394817 AQRO60306 1485 aaKnown RBP eCLIP28.19■■■□□ 2.11e-12■■■■■ 28.7
SIL1-202ENST00000394817 ZNF608Q9ULD9 1512 aaPredicted RBP28.16■■■□□ 2.1
SIL1-202ENST00000394817 CTTNBP2Q8WZ74 1663 aa28.15■■■□□ 2.1
SIL1-202ENST00000394817 MAP3K1Q13233 1512 aa28.11■■■□□ 2.09
SIL1-202ENST00000394817 KANK4Q5T7N3 995 aaPredicted RBP28.08■■■□□ 2.09
SIL1-202ENST00000394817 HNRNPUL2Q1KMD3 747 aaKnown RBP28.07■■■□□ 2.08
SIL1-202ENST00000394817 TIAM1Q13009 1591 aa28.06■■■□□ 2.08
SIL1-202ENST00000394817 EFCAB5A4FU69 1503 aa28.05■■■□□ 2.08
SIL1-202ENST00000394817 EIF4G3O43432 1585 aaKnown RBP28.05■■■□□ 2.08
SIL1-202ENST00000394817 GRIN2BQ13224 1484 aa28.05■■■□□ 2.08
SIL1-202ENST00000394817 RRBP1Q9P2E9 1410 aaKnown RBP28.04■■■□□ 2.08
SIL1-202ENST00000394817 ADAMTS12P58397 1594 aa28.04■■■□□ 2.08
SIL1-202ENST00000394817 FHAD1B1AJZ9 1412 aa28.01■■■□□ 2.07
SIL1-202ENST00000394817 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
SIL1-202ENST00000394817 PCF11O94913 1555 aaKnown RBP27.98■■■□□ 2.07
SIL1-202ENST00000394817 SNAPC4Q5SXM2 1469 aa27.91■■■□□ 2.06
SIL1-202ENST00000394817 LRRC9Q6ZRR7 1453 aa27.88■■■□□ 2.05
SIL1-202ENST00000394817 FYCO1Q9BQS8 1478 aa27.88■■■□□ 2.05
SIL1-202ENST00000394817 FHOD3Q2V2M9 1422 aa27.86■■■□□ 2.05
SIL1-202ENST00000394817 P3H3Q8IVL6 736 aa27.86■■■□□ 2.05
SIL1-202ENST00000394817 CCNB3Q8WWL7 1395 aa27.86■■■□□ 2.05
SIL1-202ENST00000394817 SAMD9Q5K651 1589 aa27.85■■■□□ 2.05
SIL1-202ENST00000394817 CASKIN1Q8WXD9 1431 aa27.81■■■□□ 2.04
SIL1-202ENST00000394817 MAGI1Q96QZ7 1491 aaPredicted RBP27.77■■■□□ 2.04
SIL1-202ENST00000394817 FMN1Q68DA7 1419 aa27.76■■■□□ 2.04
SIL1-202ENST00000394817 IQGAP2Q13576 1575 aa27.75■■■□□ 2.03
SIL1-202ENST00000394817 GRIN2AQ12879 1464 aa27.74■■■□□ 2.03
SIL1-202ENST00000394817 CLSPNQ9HAW4 1339 aa27.72■■■□□ 2.03
SIL1-202ENST00000394817 SYNJ2O15056 1496 aa27.69■■■□□ 2.02
SIL1-202ENST00000394817 DHX57Q6P158 1386 aaKnown RBP27.69■■■□□ 2.02
SIL1-202ENST00000394817 PHLDB1Q86UU1 1377 aa27.67■■■□□ 2.02
SIL1-202ENST00000394817 LRRIQ1Q96JM4 1722 aa27.65■■■□□ 2.02
SIL1-202ENST00000394817 CEP170Q5SW79 1584 aa27.62■■■□□ 2.01
SIL1-202ENST00000394817 CHMP7Q8WUX9 453 aaPredicted RBP27.62■■■□□ 2.01
SIL1-202ENST00000394817 KIAA0586Q9BVV6 1533 aa27.61■■■□□ 2.01
SIL1-202ENST00000394817 FBLN2P98095 1184 aa27.59■■■□□ 2.01
SIL1-202ENST00000394817 UGGT2Q9NYU1 1516 aa27.59■■■□□ 2.01
SIL1-202ENST00000394817 ATP1B4Q9UN42 357 aaPredicted RBP27.57■■■□□ 2
SIL1-202ENST00000394817 ZNF316A6NFI3 1004 aaPredicted RBP27.54■■■□□ 2
SIL1-202ENST00000394817 DIEXFQ68CQ4 756 aaKnown RBP27.53■■■□□ 2
SIL1-202ENST00000394817 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.52■■■□□ 2
SIL1-202ENST00000394817 NUP160Q12769 1436 aa27.5■■□□□ 1.99
SIL1-202ENST00000394817 KIAA0556O60303 1618 aa27.49■■□□□ 1.99
SIL1-202ENST00000394817 DISP1Q96F81 1524 aa27.48■■□□□ 1.99
SIL1-202ENST00000394817 RAB3GAP2Q9H2M9 1393 aa27.48■■□□□ 1.99
SIL1-202ENST00000394817 ITGAEP38570 1179 aa27.47■■□□□ 1.99
SIL1-202ENST00000394817 EHBP1L1Q8N3D4 1523 aa27.46■■□□□ 1.99
SIL1-202ENST00000394817 HECW1Q76N89 1606 aa27.45■■□□□ 1.98
SIL1-202ENST00000394817 CHD1O14646 1710 aa27.45■■□□□ 1.98
SIL1-202ENST00000394817 SUPT6HQ7KZ85 1726 aaKnown RBP27.45■■□□□ 1.98
SIL1-202ENST00000394817 SETD5Q9C0A6 1442 aa27.44■■□□□ 1.98
SIL1-202ENST00000394817 MTUS2Q5JR59 1369 aa27.44■■□□□ 1.98
SIL1-202ENST00000394817 CCDC18Q5T9S5 1454 aa27.44■■□□□ 1.98
SIL1-202ENST00000394817 FGD6Q6ZV73 1430 aa27.43■■□□□ 1.98
SIL1-202ENST00000394817 FAM50AQ14320 339 aaKnown RBP27.41■■□□□ 1.98
SIL1-202ENST00000394817 MAPKBP1O60336 1514 aa27.37■■□□□ 1.97
SIL1-202ENST00000394817 NCOA2Q15596 1464 aa27.37■■□□□ 1.97
SIL1-202ENST00000394817 ARHGEF11O15085 1522 aa27.35■■□□□ 1.97
SIL1-202ENST00000394817 MAGI3Q5TCQ9 1506 aa27.33■■□□□ 1.97
SIL1-202ENST00000394817 MYOM3Q5VTT5 1437 aa27.32■■□□□ 1.96
SIL1-202ENST00000394817 JPH4Q96JJ6 628 aa27.3■■□□□ 1.96
SIL1-202ENST00000394817 EPRSP07814 1512 aaKnown RBP27.29■■□□□ 1.96
SIL1-202ENST00000394817 CDK13Q14004 1512 aaKnown RBP27.25■■□□□ 1.95
SIL1-202ENST00000394817 PTPN23Q9H3S7 1636 aa27.25■■□□□ 1.95
SIL1-202ENST00000394817 RAPGEF6Q8TEU7 1601 aa27.24■■□□□ 1.95
SIL1-202ENST00000394817 CARMIL2Q6F5E8 1435 aa27.23■■□□□ 1.95
SIL1-202ENST00000394817 ARID3CA6NKF2 412 aa27.21■■□□□ 1.95
SIL1-202ENST00000394817 NUP153P49790 1475 aaKnown RBP27.18■■□□□ 1.94
SIL1-202ENST00000394817 HFM1A2PYH4 1435 aa27.18■■□□□ 1.94
SIL1-202ENST00000394817 TCOF1Q13428 1488 aaKnown RBP27.17■■□□□ 1.94
SIL1-202ENST00000394817 PTPRKQ15262 1439 aa27.16■■□□□ 1.94
SIL1-202ENST00000394817 PLB1Q6P1J6 1458 aa27.16■■□□□ 1.94
SIL1-202ENST00000394817 PRG4Q92954 1404 aaPredicted RBP27.15■■□□□ 1.94
SIL1-202ENST00000394817 SHROOM2Q13796 1616 aa27.13■■□□□ 1.93
SIL1-202ENST00000394817 MIA2Q96PC5 1412 aa27.08■■□□□ 1.93
SIL1-202ENST00000394817 GCC2Q8IWJ2 1684 aa27.07■■□□□ 1.92
SIL1-202ENST00000394817 NAIPQ13075 1403 aa27.06■■□□□ 1.92
SIL1-202ENST00000394817 ABCA8O94911 1581 aa27.06■■□□□ 1.92
SIL1-202ENST00000394817 CLASP1Q7Z460 1538 aa27.05■■□□□ 1.92
SIL1-202ENST00000394817 ERCC6L2Q5T890 1561 aa27.03■■□□□ 1.92
SIL1-202ENST00000394817 UACAQ9BZF9 1416 aa27.03■■□□□ 1.92
SIL1-202ENST00000394817 AKNAQ7Z591 1439 aa27.01■■□□□ 1.91
SIL1-202ENST00000394817 TIMELESSQ9UNS1 1208 aa26.98■■□□□ 1.91
SIL1-202ENST00000394817 PTPRGP23470 1445 aa26.98■■□□□ 1.91
SIL1-202ENST00000394817 MIER1Q8N108 512 aa26.97■■□□□ 1.91
SIL1-202ENST00000394817 ACIN1Q9UKV3 1341 aaKnown RBP26.97■■□□□ 1.91
SIL1-202ENST00000394817 CENPBP07199 599 aaPredicted RBP26.95■■□□□ 1.9
SIL1-202ENST00000394817 SIN3AQ96ST3 1273 aa26.93■■□□□ 1.9
SIL1-202ENST00000394817 SCAF1Q9H7N4 1312 aaKnown RBP26.93■■□□□ 1.9
SIL1-202ENST00000394817 ADCY10Q96PN6 1610 aa26.92■■□□□ 1.9
SIL1-202ENST00000394817 DNMT1P26358 1616 aaKnown RBP26.9■■□□□ 1.9
SIL1-202ENST00000394817 NEUROD1Q13562 356 aa26.9■■□□□ 1.9
SIL1-202ENST00000394817 CDK11AQ9UQ88 783 aaPredicted RBP26.89■■□□□ 1.9
SIL1-202ENST00000394817 ITSN2Q9NZM3 1697 aa26.89■■□□□ 1.89
SIL1-202ENST00000394817 TROQ12816 1431 aaPredicted RBP26.89■■□□□ 1.89
SIL1-202ENST00000394817 ATP10BO94823 1461 aa26.89■■□□□ 1.89
SIL1-202ENST00000394817 KIF14Q15058 1648 aa26.86■■□□□ 1.89
SIL1-202ENST00000394817 KDM6BO15054 1643 aa26.83■■□□□ 1.88
SIL1-202ENST00000394817 DAPK1P53355 1430 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms