RNA–Protein interactions for RNA: ENST00000394729.6

PRKCD-202, Transcript of protein kinase C delta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCD, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCD-202ENST00000394729 CCER1Q8TC90 406 aaPredicted RBP31.05■■■□□ 2.56
PRKCD-202ENST00000394729 WDR97A6NE52 1622 aa31.05■■■□□ 2.56
PRKCD-202ENST00000394729 ABCA5Q8WWZ7 1642 aa31.03■■■□□ 2.56
PRKCD-202ENST00000394729 ARID3CA6NKF2 412 aa31.01■■■□□ 2.55
PRKCD-202ENST00000394729 ITGAEP38570 1179 aa31■■■□□ 2.55
PRKCD-202ENST00000394729 CUL7Q14999 1698 aa30.93■■■□□ 2.54
PRKCD-202ENST00000394729 WDR62O43379 1518 aa30.92■■■□□ 2.54
PRKCD-202ENST00000394729 IFT140Q96RY7 1462 aa30.87■■■□□ 2.53
PRKCD-202ENST00000394729 CHMP7Q8WUX9 453 aaPredicted RBP30.83■■■□□ 2.53
PRKCD-202ENST00000394729 GRIN2BQ13224 1484 aa30.83■■■□□ 2.53
PRKCD-202ENST00000394729 PBRM1Q86U86 1689 aa30.81■■■□□ 2.52
PRKCD-202ENST00000394729 SNAPC4Q5SXM2 1469 aa30.8■■■□□ 2.52
PRKCD-202ENST00000394729 THOC2Q8NI27 1593 aaKnown RBP30.8■■■□□ 2.52
PRKCD-202ENST00000394729 FHAD1B1AJZ9 1412 aa30.78■■■□□ 2.52
PRKCD-202ENST00000394729 CTTNBP2Q8WZ74 1663 aa30.74■■■□□ 2.51
PRKCD-202ENST00000394729 EIF4G3O43432 1585 aaKnown RBP30.73■■■□□ 2.51
PRKCD-202ENST00000394729 PCF11O94913 1555 aaKnown RBP30.7■■■□□ 2.5
PRKCD-202ENST00000394729 ADAMTS12P58397 1594 aa30.67■■■□□ 2.5
PRKCD-202ENST00000394729 FAM50AQ14320 339 aaKnown RBP30.66■■■□□ 2.5
PRKCD-202ENST00000394729 ZEB1P37275 1124 aaPredicted RBP30.61■■■□□ 2.49
PRKCD-202ENST00000394729 TIAM1Q13009 1591 aa30.57■■■□□ 2.48
PRKCD-202ENST00000394729 EFCAB5A4FU69 1503 aa30.54■■■□□ 2.48
PRKCD-202ENST00000394729 PHLDB1Q86UU1 1377 aa30.53■■■□□ 2.48
PRKCD-202ENST00000394729 FMN1Q68DA7 1419 aa30.53■■■□□ 2.48
PRKCD-202ENST00000394729 LRRC9Q6ZRR7 1453 aa30.52■■■□□ 2.48
PRKCD-202ENST00000394729 GRIN2AQ12879 1464 aa30.52■■■□□ 2.48
PRKCD-202ENST00000394729 IQGAP2Q13576 1575 aa30.52■■■□□ 2.48
PRKCD-202ENST00000394729 CCNB3Q8WWL7 1395 aa30.49■■■□□ 2.47
PRKCD-202ENST00000394729 MTUS2Q5JR59 1369 aa30.48■■■□□ 2.47
PRKCD-202ENST00000394729 CASKIN1Q8WXD9 1431 aa30.48■■■□□ 2.47
PRKCD-202ENST00000394729 FYCO1Q9BQS8 1478 aa30.43■■■□□ 2.46
PRKCD-202ENST00000394729 SAMD9Q5K651 1589 aa30.42■■■□□ 2.46
PRKCD-202ENST00000394729 JPH4Q96JJ6 628 aa30.4■■■□□ 2.46
PRKCD-202ENST00000394729 SYNJ2O15056 1496 aa30.4■■■□□ 2.46
PRKCD-202ENST00000394729 MAGI1Q96QZ7 1491 aaPredicted RBP30.38■■■□□ 2.45
PRKCD-202ENST00000394729 KIAA0586Q9BVV6 1533 aa30.36■■■□□ 2.45
PRKCD-202ENST00000394729 RRBP1Q9P2E9 1410 aaKnown RBP30.33■■■□□ 2.45
PRKCD-202ENST00000394729 CEP170Q5SW79 1584 aa30.33■■■□□ 2.45
PRKCD-202ENST00000394729 CDK13Q14004 1512 aaKnown RBP30.31■■■□□ 2.44
PRKCD-202ENST00000394729 DISP1Q96F81 1524 aa30.27■■■□□ 2.44
PRKCD-202ENST00000394729 LRRIQ1Q96JM4 1722 aa30.27■■■□□ 2.44
PRKCD-202ENST00000394729 CFAP43Q8NDM7 1665 aa30.26■■■□□ 2.43
PRKCD-202ENST00000394729 MAP3K1Q13233 1512 aa30.22■■■□□ 2.43
PRKCD-202ENST00000394729 UGGT2Q9NYU1 1516 aa30.19■■■□□ 2.42
PRKCD-202ENST00000394729 CHIC2Q9UKJ5 165 aa30.19■■■□□ 2.42
PRKCD-202ENST00000394729 PLB1Q6P1J6 1458 aa30.18■■■□□ 2.42
PRKCD-202ENST00000394729 MAGI3Q5TCQ9 1506 aa30.18■■■□□ 2.42
PRKCD-202ENST00000394729 KIAA0556O60303 1618 aa30.17■■■□□ 2.42
PRKCD-202ENST00000394729 EPRSP07814 1512 aaKnown RBP30.15■■■□□ 2.42
PRKCD-202ENST00000394729 NCOA2Q15596 1464 aa30.14■■■□□ 2.42
PRKCD-202ENST00000394729 NUP160Q12769 1436 aa30.11■■■□□ 2.41
PRKCD-202ENST00000394729 RAB3GAP2Q9H2M9 1393 aa30.11■■■□□ 2.41
PRKCD-202ENST00000394729 FGD6Q6ZV73 1430 aa30.08■■■□□ 2.41
PRKCD-202ENST00000394729 CARMIL2Q6F5E8 1435 aa30.07■■■□□ 2.4
PRKCD-202ENST00000394729 PRG4Q92954 1404 aaPredicted RBP30.06■■■□□ 2.4
PRKCD-202ENST00000394729 DHX57Q6P158 1386 aaKnown RBP30.06■■■□□ 2.4
PRKCD-202ENST00000394729 HECW1Q76N89 1606 aa30.06■■■□□ 2.4
PRKCD-202ENST00000394729 ZNF777Q9ULD5 760 aaPredicted RBP30.05■■■□□ 2.4
PRKCD-202ENST00000394729 NUP153P49790 1475 aaKnown RBP30.04■■■□□ 2.4
PRKCD-202ENST00000394729 RRP7BPQ9NSQ0 103 aa30.04■■■□□ 2.4
PRKCD-202ENST00000394729 ZNF644Q9H582 1327 aaPredicted RBP30.02■■■□□ 2.4
PRKCD-202ENST00000394729 CHD1O14646 1710 aa30.02■■■□□ 2.4
PRKCD-202ENST00000394729 CCDC18Q5T9S5 1454 aa29.99■■■□□ 2.39
PRKCD-202ENST00000394729 MYOM3Q5VTT5 1437 aa29.98■■■□□ 2.39
PRKCD-202ENST00000394729 NEUROD1Q13562 356 aa29.96■■■□□ 2.39
PRKCD-202ENST00000394729 CDK11AQ9UQ88 783 aaPredicted RBP29.95■■■□□ 2.39
PRKCD-202ENST00000394729 EHBP1L1Q8N3D4 1523 aa29.95■■■□□ 2.39
PRKCD-202ENST00000394729 PTPRKQ15262 1439 aa29.95■■■□□ 2.39
PRKCD-202ENST00000394729 SUPT6HQ7KZ85 1726 aaKnown RBP29.94■■■□□ 2.38
PRKCD-202ENST00000394729 RAPGEF6Q8TEU7 1601 aa29.94■■■□□ 2.38
PRKCD-202ENST00000394729 SETD5Q9C0A6 1442 aa29.94■■■□□ 2.38
PRKCD-202ENST00000394729 PTPRGP23470 1445 aa29.91■■■□□ 2.38
PRKCD-202ENST00000394729 SIN3AQ96ST3 1273 aa29.89■■■□□ 2.37
PRKCD-202ENST00000394729 ERCC6L2Q5T890 1561 aa29.87■■■□□ 2.37
PRKCD-202ENST00000394729 PLEKHD1A6NEE1 506 aa29.86■■■□□ 2.37
PRKCD-202ENST00000394729 KCNH8Q96L42 1107 aa29.82■■■□□ 2.36
PRKCD-202ENST00000394729 CFDP1Q9UEE9 299 aaPredicted RBP29.82■■■□□ 2.36
PRKCD-202ENST00000394729 PTPN23Q9H3S7 1636 aa29.79■■■□□ 2.36
PRKCD-202ENST00000394729 TRIM52Q96A61 297 aa29.78■■■□□ 2.36
PRKCD-202ENST00000394729 ATP10BO94823 1461 aa29.73■■■□□ 2.35
PRKCD-202ENST00000394729 TROQ12816 1431 aaPredicted RBP29.71■■■□□ 2.35
PRKCD-202ENST00000394729 KIF14Q15058 1648 aa29.71■■■□□ 2.35
PRKCD-202ENST00000394729 ARHGEF11O15085 1522 aa29.7■■■□□ 2.34
PRKCD-202ENST00000394729 DIEXFQ68CQ4 756 aaKnown RBP29.68■■■□□ 2.34
PRKCD-202ENST00000394729 ZNF316A6NFI3 1004 aaPredicted RBP29.67■■■□□ 2.34
PRKCD-202ENST00000394729 FOXD1Q16676 465 aa29.67■■■□□ 2.34
PRKCD-202ENST00000394729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.64■■■□□ 2.34
PRKCD-202ENST00000394729 NAIPQ13075 1403 aa29.63■■■□□ 2.33
PRKCD-202ENST00000394729 ABCA8O94911 1581 aa29.62■■■□□ 2.33
PRKCD-202ENST00000394729 MAPKBP1O60336 1514 aa29.62■■■□□ 2.33
PRKCD-202ENST00000394729 UACAQ9BZF9 1416 aa29.6■■■□□ 2.33
PRKCD-202ENST00000394729 HNRNPMP52272 730 aaKnown RBP eCLIP29.59■■■□□ 2.33
PRKCD-202ENST00000394729 HFM1A2PYH4 1435 aa29.58■■■□□ 2.33
PRKCD-202ENST00000394729 CLSPNQ9HAW4 1339 aa29.56■■■□□ 2.32
PRKCD-202ENST00000394729 GPATCH8Q9UKJ3 1502 aaKnown RBP29.56■■■□□ 2.32
PRKCD-202ENST00000394729 MIA2Q96PC5 1412 aa29.56■■■□□ 2.32
PRKCD-202ENST00000394729 HIRIP3Q9BW71 556 aaPredicted RBP29.53■■■□□ 2.32
PRKCD-202ENST00000394729 DAPK1P53355 1430 aa29.52■■■□□ 2.32
PRKCD-202ENST00000394729 ABCC5O15440 1437 aa29.51■■■□□ 2.31
PRKCD-202ENST00000394729 TCOF1Q13428 1488 aaKnown RBP29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms