RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 GOLGA3Q08378 1498 aa21.35■■□□□ 1.01
SRSF5-201ENST00000394366 CUL7Q14999 1698 aa21.33■■□□□ 1
SRSF5-201ENST00000394366 CYB5RLQ6IPT4 315 aa21.33■■□□□ 1
SRSF5-201ENST00000394366 CARMIL1Q5VZK9 1371 aa21.32■■□□□ 1
SRSF5-201ENST00000394366 TNIKQ9UKE5 1360 aa21.3■■□□□ 1
SRSF5-201ENST00000394366 ARAP1Q96P48 1450 aa21.29■■□□□ 1
SRSF5-201ENST00000394366 EHMT2Q96KQ7 1210 aa21.25■□□□□ 0.99
SRSF5-201ENST00000394366 JPH4Q96JJ6 628 aa21.22■□□□□ 0.99
SRSF5-201ENST00000394366 PRXQ9BXM0 1461 aa21.19■□□□□ 0.98
SRSF5-201ENST00000394366 SHROOM2Q13796 1616 aa21.18■□□□□ 0.98
SRSF5-201ENST00000394366 KIAA0586Q9BVV6 1533 aa21.18■□□□□ 0.98
SRSF5-201ENST00000394366 UBTFP17480 764 aaKnown RBP21.18■□□□□ 0.98
SRSF5-201ENST00000394366 RAPGEF2Q9Y4G8 1499 aa21.17■□□□□ 0.98
SRSF5-201ENST00000394366 ERCC6L2Q5T890 1561 aa21.16■□□□□ 0.98
SRSF5-201ENST00000394366 PRG4Q92954 1404 aaPredicted RBP21.16■□□□□ 0.98
SRSF5-201ENST00000394366 CEP162Q5TB80 1403 aa21.15■□□□□ 0.98
SRSF5-201ENST00000394366 IQGAP2Q13576 1575 aa21.02■□□□□ 0.96
SRSF5-201ENST00000394366 CARMIL2Q6F5E8 1435 aa20.98■□□□□ 0.95
SRSF5-201ENST00000394366 CLIP1P30622 1438 aa20.98■□□□□ 0.95
SRSF5-201ENST00000394366 TRHP20396 242 aaPredicted RBP20.93■□□□□ 0.94
SRSF5-201ENST00000394366 UGGT2Q9NYU1 1516 aa20.92■□□□□ 0.94
SRSF5-201ENST00000394366 PTPRGP23470 1445 aa20.91■□□□□ 0.94
SRSF5-201ENST00000394366 TTBK1Q5TCY1 1321 aaPredicted RBP20.91■□□□□ 0.94
SRSF5-201ENST00000394366 DISP1Q96F81 1524 aa20.89■□□□□ 0.94
SRSF5-201ENST00000394366 CTTNBP2Q8WZ74 1663 aa20.89■□□□□ 0.93
SRSF5-201ENST00000394366 TRIM26Q12899 539 aaPredicted RBP20.89■□□□□ 0.93
SRSF5-201ENST00000394366 NPM1P06748 294 aaKnown RBP eCLIP20.85■□□□□ 0.93
SRSF5-201ENST00000394366 VPS8Q8N3P4 1428 aa20.83■□□□□ 0.92
SRSF5-201ENST00000394366 KIAA0556O60303 1618 aa20.82■□□□□ 0.92
SRSF5-201ENST00000394366 PCGF6Q9BYE7 350 aa20.81■□□□□ 0.92
SRSF5-201ENST00000394366 ADCY10Q96PN6 1610 aa20.8■□□□□ 0.92
SRSF5-201ENST00000394366 UACAQ9BZF9 1416 aa20.76■□□□□ 0.91
SRSF5-201ENST00000394366 P3H3Q8IVL6 736 aa20.73■□□□□ 0.91
SRSF5-201ENST00000394366 RANGAP1P46060 587 aaPredicted RBP20.72■□□□□ 0.91
SRSF5-201ENST00000394366 UHRF1BP1LA0JNW5 1464 aa20.72■□□□□ 0.91
SRSF5-201ENST00000394366 ARHGAP35Q9NRY4 1499 aa20.71■□□□□ 0.91
SRSF5-201ENST00000394366 ABCC2Q92887 1545 aa20.7■□□□□ 0.9
SRSF5-201ENST00000394366 MAPKBP1O60336 1514 aa20.69■□□□□ 0.9
SRSF5-201ENST00000394366 EFCAB5A4FU69 1503 aa20.68■□□□□ 0.9
SRSF5-201ENST00000394366 APLP2Q06481 763 aa20.66■□□□□ 0.9
SRSF5-201ENST00000394366 PLB1Q6P1J6 1458 aa20.66■□□□□ 0.9
SRSF5-201ENST00000394366 SAMD9Q5K651 1589 aa20.65■□□□□ 0.9
SRSF5-201ENST00000394366 FAM69CQ0P6D2 419 aa20.64■□□□□ 0.89
SRSF5-201ENST00000394366 ABCC10Q5T3U5 1492 aa20.62■□□□□ 0.89
SRSF5-201ENST00000394366 KDM5BQ9UGL1 1544 aa20.62■□□□□ 0.89
SRSF5-201ENST00000394366 ABCA8O94911 1581 aa20.6■□□□□ 0.89
SRSF5-201ENST00000394366 ASXL2Q76L83 1435 aa20.59■□□□□ 0.89
SRSF5-201ENST00000394366 FHOD3Q2V2M9 1422 aa20.58■□□□□ 0.88
SRSF5-201ENST00000394366 PPARGC1BQ86YN6 1023 aaKnown RBP20.56■□□□□ 0.88
SRSF5-201ENST00000394366 DIP2BQ9P265 1576 aa20.55■□□□□ 0.88
SRSF5-201ENST00000394366 KIF13AQ9H1H9 1805 aa20.55■□□□□ 0.88
SRSF5-201ENST00000394366 ZCCHC11Q5TAX3 1644 aaKnown RBP20.55■□□□□ 0.88
SRSF5-201ENST00000394366 ARID3CA6NKF2 412 aa20.51■□□□□ 0.87
SRSF5-201ENST00000394366 MAP3K1Q13233 1512 aa20.51■□□□□ 0.87
SRSF5-201ENST00000394366 RAPGEF6Q8TEU7 1601 aa20.48■□□□□ 0.87
SRSF5-201ENST00000394366 FMN1Q68DA7 1419 aa20.48■□□□□ 0.87
SRSF5-201ENST00000394366 ATP10BO94823 1461 aa20.47■□□□□ 0.87
SRSF5-201ENST00000394366 WDR7Q9Y4E6 1490 aa20.47■□□□□ 0.87
SRSF5-201ENST00000394366 EPRSP07814 1512 aaKnown RBP20.46■□□□□ 0.87
SRSF5-201ENST00000394366 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.45■□□□□ 0.86
SRSF5-201ENST00000394366 HNRNPUL2Q1KMD3 747 aaKnown RBP20.45■□□□□ 0.86
SRSF5-201ENST00000394366 GLI2P10070 1586 aa20.45■□□□□ 0.86
SRSF5-201ENST00000394366 FYCO1Q9BQS8 1478 aa20.44■□□□□ 0.86
SRSF5-201ENST00000394366 KCNH8Q96L42 1107 aa20.42■□□□□ 0.86
SRSF5-201ENST00000394366 NUP153P49790 1475 aaKnown RBP20.42■□□□□ 0.86
SRSF5-201ENST00000394366 CASKIN1Q8WXD9 1431 aa20.41■□□□□ 0.86
SRSF5-201ENST00000394366 PCF11O94913 1555 aaKnown RBP20.41■□□□□ 0.86
SRSF5-201ENST00000394366 TIAM1Q13009 1591 aa20.41■□□□□ 0.86
SRSF5-201ENST00000394366 CFAP43Q8NDM7 1665 aa20.38■□□□□ 0.85
SRSF5-201ENST00000394366 ATP1B4Q9UN42 357 aaPredicted RBP20.38■□□□□ 0.85
SRSF5-201ENST00000394366 TSPOAP1O95153 1857 aa20.37■□□□□ 0.85
SRSF5-201ENST00000394366 HRCP23327 699 aa20.36■□□□□ 0.85
SRSF5-201ENST00000394366 PLEKHD1A6NEE1 506 aa20.33■□□□□ 0.84
SRSF5-201ENST00000394366 MAP3K4Q9Y6R4 1608 aa20.33■□□□□ 0.84
SRSF5-201ENST00000394366 CD109Q6YHK3 1445 aa20.31■□□□□ 0.84
SRSF5-201ENST00000394366 LRRC9Q6ZRR7 1453 aa20.3■□□□□ 0.84
SRSF5-201ENST00000394366 KANK4Q5T7N3 995 aaPredicted RBP20.3■□□□□ 0.84
SRSF5-201ENST00000394366 HECW1Q76N89 1606 aa20.29■□□□□ 0.84
SRSF5-201ENST00000394366 TEX14Q8IWB6 1497 aa20.29■□□□□ 0.84
SRSF5-201ENST00000394366 PPRC1Q5VV67 1664 aaKnown RBP20.28■□□□□ 0.84
SRSF5-201ENST00000394366 CDK13Q14004 1512 aaKnown RBP20.27■□□□□ 0.84
SRSF5-201ENST00000394366 KDM6BO15054 1643 aa20.26■□□□□ 0.83
SRSF5-201ENST00000394366 MAGI3Q5TCQ9 1506 aa20.25■□□□□ 0.83
SRSF5-201ENST00000394366 CCDC18Q5T9S5 1454 aa20.25■□□□□ 0.83
SRSF5-201ENST00000394366 CDK11AQ9UQ88 783 aaPredicted RBP20.24■□□□□ 0.83
SRSF5-201ENST00000394366 RRBP1Q9P2E9 1410 aaKnown RBP20.23■□□□□ 0.83
SRSF5-201ENST00000394366 ABCA9Q8IUA7 1624 aa20.21■□□□□ 0.83
SRSF5-201ENST00000394366 ZEB1P37275 1124 aaPredicted RBP20.2■□□□□ 0.82
SRSF5-201ENST00000394366 COL17A1Q9UMD9 1497 aaPredicted RBP20.16■□□□□ 0.82
SRSF5-201ENST00000394366 LRRIQ1Q96JM4 1722 aa20.16■□□□□ 0.82
SRSF5-201ENST00000394366 EHBP1L1Q8N3D4 1523 aa20.14■□□□□ 0.81
SRSF5-201ENST00000394366 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.14■□□□□ 0.81
SRSF5-201ENST00000394366 CCNB3Q8WWL7 1395 aa20.14■□□□□ 0.81
SRSF5-201ENST00000394366 TROQ12816 1431 aaPredicted RBP20.13■□□□□ 0.81
SRSF5-201ENST00000394366 MTUS2Q5JR59 1369 aa20.13■□□□□ 0.81
SRSF5-201ENST00000394366 PHLDB1Q86UU1 1377 aa20.12■□□□□ 0.81
SRSF5-201ENST00000394366 NEO1Q92859 1461 aa20.09■□□□□ 0.81
SRSF5-201ENST00000394366 TTC37Q6PGP7 1564 aa20.08■□□□□ 0.81
SRSF5-201ENST00000394366 SUPT6HQ7KZ85 1726 aaKnown RBP20.08■□□□□ 0.81
SRSF5-201ENST00000394366 ARAP3Q8WWN8 1544 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms