RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 MAGI1Q96QZ7 1491 aaPredicted RBP27.42■■□□□ 1.98
MBD4-202ENST00000393278 TRIM26Q12899 539 aaPredicted RBP27.36■■□□□ 1.97
MBD4-202ENST00000393278 EFCAB5A4FU69 1503 aa27.34■■□□□ 1.97
MBD4-202ENST00000393278 PCGF6Q9BYE7 350 aa27.33■■□□□ 1.97
MBD4-202ENST00000393278 SYNJ2O15056 1496 aa27.31■■□□□ 1.96
MBD4-202ENST00000393278 GRIN2AQ12879 1464 aa27.31■■□□□ 1.96
MBD4-202ENST00000393278 PPARGC1BQ86YN6 1023 aaKnown RBP27.3■■□□□ 1.96
MBD4-202ENST00000393278 IQGAP2Q13576 1575 aa27.25■■□□□ 1.95
MBD4-202ENST00000393278 SAMD9Q5K651 1589 aa27.24■■□□□ 1.95
MBD4-202ENST00000393278 CHMP7Q8WUX9 453 aaPredicted RBP27.22■■□□□ 1.95
MBD4-202ENST00000393278 FHOD3Q2V2M9 1422 aa27.2■■□□□ 1.94
MBD4-202ENST00000393278 KIAA0586Q9BVV6 1533 aa27.19■■□□□ 1.94
MBD4-202ENST00000393278 APLP2Q06481 763 aa27.19■■□□□ 1.94
MBD4-202ENST00000393278 P3H3Q8IVL6 736 aa27.17■■□□□ 1.94
MBD4-202ENST00000393278 CEP170Q5SW79 1584 aa27.14■■□□□ 1.93
MBD4-202ENST00000393278 UGGT2Q9NYU1 1516 aa27.13■■□□□ 1.93
MBD4-202ENST00000393278 NUP160Q12769 1436 aa27.13■■□□□ 1.93
MBD4-202ENST00000393278 FBLN2P98095 1184 aa27.12■■□□□ 1.93
MBD4-202ENST00000393278 FMN1Q68DA7 1419 aa27.09■■□□□ 1.93
MBD4-202ENST00000393278 TTBK1Q5TCY1 1321 aaPredicted RBP27.08■■□□□ 1.93
MBD4-202ENST00000393278 PCF11O94913 1555 aaKnown RBP27.08■■□□□ 1.92
MBD4-202ENST00000393278 MAP3K1Q13233 1512 aa27.05■■□□□ 1.92
MBD4-202ENST00000393278 FYCO1Q9BQS8 1478 aa27.04■■□□□ 1.92
MBD4-202ENST00000393278 CASKIN1Q8WXD9 1431 aa27.03■■□□□ 1.92
MBD4-202ENST00000393278 CHD1O14646 1710 aa26.99■■□□□ 1.91
MBD4-202ENST00000393278 TIAM1Q13009 1591 aa26.99■■□□□ 1.91
MBD4-202ENST00000393278 DISP1Q96F81 1524 aa26.98■■□□□ 1.91
MBD4-202ENST00000393278 KIAA0556O60303 1618 aa26.98■■□□□ 1.91
MBD4-202ENST00000393278 KANK4Q5T7N3 995 aaPredicted RBP26.96■■□□□ 1.91
MBD4-202ENST00000393278 CFAP43Q8NDM7 1665 aa26.94■■□□□ 1.9
MBD4-202ENST00000393278 JPH4Q96JJ6 628 aa26.89■■□□□ 1.9
MBD4-202ENST00000393278 ATP1B4Q9UN42 357 aaPredicted RBP26.88■■□□□ 1.89
MBD4-202ENST00000393278 LRRC9Q6ZRR7 1453 aa26.86■■□□□ 1.89
MBD4-202ENST00000393278 CARMIL2Q6F5E8 1435 aa26.84■■□□□ 1.89
MBD4-202ENST00000393278 HECW1Q76N89 1606 aa26.8■■□□□ 1.88
MBD4-202ENST00000393278 LRRIQ1Q96JM4 1722 aa26.8■■□□□ 1.88
MBD4-202ENST00000393278 CCDC18Q5T9S5 1454 aa26.76■■□□□ 1.87
MBD4-202ENST00000393278 SHROOM2Q13796 1616 aa26.74■■□□□ 1.87
MBD4-202ENST00000393278 PRG4Q92954 1404 aaPredicted RBP26.73■■□□□ 1.87
MBD4-202ENST00000393278 CLASP1Q7Z460 1538 aa26.71■■□□□ 1.87
MBD4-202ENST00000393278 RAPGEF6Q8TEU7 1601 aa26.71■■□□□ 1.87
MBD4-202ENST00000393278 EPRSP07814 1512 aaKnown RBP26.7■■□□□ 1.87
MBD4-202ENST00000393278 RRBP1Q9P2E9 1410 aaKnown RBP26.69■■□□□ 1.86
MBD4-202ENST00000393278 MTUS2Q5JR59 1369 aa26.66■■□□□ 1.86
MBD4-202ENST00000393278 NUP153P49790 1475 aaKnown RBP26.65■■□□□ 1.86
MBD4-202ENST00000393278 EHBP1L1Q8N3D4 1523 aa26.64■■□□□ 1.86
MBD4-202ENST00000393278 PLB1Q6P1J6 1458 aa26.63■■□□□ 1.85
MBD4-202ENST00000393278 CDK13Q14004 1512 aaKnown RBP26.63■■□□□ 1.85
MBD4-202ENST00000393278 PHLDB1Q86UU1 1377 aa26.62■■□□□ 1.85
MBD4-202ENST00000393278 MAGI3Q5TCQ9 1506 aa26.6■■□□□ 1.85
MBD4-202ENST00000393278 CCNB3Q8WWL7 1395 aa26.6■■□□□ 1.85
MBD4-202ENST00000393278 ABCA8O94911 1581 aa26.59■■□□□ 1.85
MBD4-202ENST00000393278 HRCP23327 699 aa26.57■■□□□ 1.84
MBD4-202ENST00000393278 PTPRGP23470 1445 aa26.56■■□□□ 1.84
MBD4-202ENST00000393278 SUPT6HQ7KZ85 1726 aaKnown RBP26.55■■□□□ 1.84
MBD4-202ENST00000393278 ERCC6L2Q5T890 1561 aa26.54■■□□□ 1.84
MBD4-202ENST00000393278 NCOA2Q15596 1464 aa26.52■■□□□ 1.84
MBD4-202ENST00000393278 ARID3CA6NKF2 412 aa26.52■■□□□ 1.84
MBD4-202ENST00000393278 HNRNPUL2Q1KMD3 747 aaKnown RBP26.51■■□□□ 1.83
MBD4-202ENST00000393278 ARHGEF11O15085 1522 aa26.51■■□□□ 1.83
MBD4-202ENST00000393278 CDK11AQ9UQ88 783 aaPredicted RBP26.45■■□□□ 1.82
MBD4-202ENST00000393278 FGD6Q6ZV73 1430 aa26.43■■□□□ 1.82
MBD4-202ENST00000393278 MYOM3Q5VTT5 1437 aa26.43■■□□□ 1.82
MBD4-202ENST00000393278 UACAQ9BZF9 1416 aa26.43■■□□□ 1.82
MBD4-202ENST00000393278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.42■■□□□ 1.82
MBD4-202ENST00000393278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.42■■□□□ 1.82
MBD4-202ENST00000393278 OSCARQ8IYS5 282 aa26.41■■□□□ 1.82
MBD4-202ENST00000393278 ATP10BO94823 1461 aa26.4■■□□□ 1.82
MBD4-202ENST00000393278 TROQ12816 1431 aaPredicted RBP26.4■■□□□ 1.82
MBD4-202ENST00000393278 DNAJC5Q9H3Z4 198 aa26.39■■□□□ 1.82
MBD4-202ENST00000393278 FAM50AQ14320 339 aaKnown RBP26.35■■□□□ 1.81
MBD4-202ENST00000393278 ABCC2Q92887 1545 aa26.35■■□□□ 1.81
MBD4-202ENST00000393278 ADCY10Q96PN6 1610 aa26.33■■□□□ 1.8
MBD4-202ENST00000393278 UHRF1BP1LA0JNW5 1464 aa26.29■■□□□ 1.8
MBD4-202ENST00000393278 PTPN23Q9H3S7 1636 aa26.29■■□□□ 1.8
MBD4-202ENST00000393278 MIA2Q96PC5 1412 aa26.29■■□□□ 1.8
MBD4-202ENST00000393278 PLEKHD1A6NEE1 506 aa26.28■■□□□ 1.8
MBD4-202ENST00000393278 ITGAEP38570 1179 aa26.28■■□□□ 1.8
MBD4-202ENST00000393278 TCOF1Q13428 1488 aaKnown RBP26.27■■□□□ 1.8
MBD4-202ENST00000393278 ZEB1P37275 1124 aaPredicted RBP26.26■■□□□ 1.79
MBD4-202ENST00000393278 CCER1Q8TC90 406 aaPredicted RBP26.26■■□□□ 1.79
MBD4-202ENST00000393278 KIF14Q15058 1648 aa26.25■■□□□ 1.79
MBD4-202ENST00000393278 KDM5BQ9UGL1 1544 aa26.18■■□□□ 1.78
MBD4-202ENST00000393278 ITSN2Q9NZM3 1697 aa26.18■■□□□ 1.78
MBD4-202ENST00000393278 ABCC10Q5T3U5 1492 aa26.17■■□□□ 1.78
MBD4-202ENST00000393278 GPATCH8Q9UKJ3 1502 aaKnown RBP26.16■■□□□ 1.78
MBD4-202ENST00000393278 ZCCHC11Q5TAX3 1644 aaKnown RBP26.15■■□□□ 1.78
MBD4-202ENST00000393278 PTPRKQ15262 1439 aa26.13■■□□□ 1.77
MBD4-202ENST00000393278 SETD5Q9C0A6 1442 aa26.11■■□□□ 1.77
MBD4-202ENST00000393278 CDC42BPAQ5VT25 1732 aa26.08■■□□□ 1.77
MBD4-202ENST00000393278 RAB3GAP2Q9H2M9 1393 aa26.08■■□□□ 1.77
MBD4-202ENST00000393278 CFDP1Q9UEE9 299 aaPredicted RBP26.07■■□□□ 1.76
MBD4-202ENST00000393278 CAMSAP2Q08AD1 1489 aa26.04■■□□□ 1.76
MBD4-202ENST00000393278 ZNF644Q9H582 1327 aaPredicted RBP26.03■■□□□ 1.76
MBD4-202ENST00000393278 HFM1A2PYH4 1435 aa26.02■■□□□ 1.76
MBD4-202ENST00000393278 DNMT1P26358 1616 aaKnown RBP26.02■■□□□ 1.76
MBD4-202ENST00000393278 DHX57Q6P158 1386 aaKnown RBP26.02■■□□□ 1.76
MBD4-202ENST00000393278 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26■■□□□ 1.752e-7■■■□□ 19.1
MBD4-202ENST00000393278 DAPK1P53355 1430 aa26■■□□□ 1.75
MBD4-202ENST00000393278 TTC37Q6PGP7 1564 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms