RNA–Protein interactions for RNA: ENST00000392045.7

SP140-203, Transcript of SP140 nuclear body protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SP140, Length 3,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-203ENST00000392045 RAPGEF2Q9Y4G8 1499 aa11.84□□□□□ -0.51
SP140-203ENST00000392045 P3H3Q8IVL6 736 aa11.84□□□□□ -0.51
SP140-203ENST00000392045 PHF23Q9BUL5 403 aaPredicted RBP11.83□□□□□ -0.52
SP140-203ENST00000392045 ZNF316A6NFI3 1004 aaPredicted RBP11.82□□□□□ -0.52
SP140-203ENST00000392045 PRXQ9BXM0 1461 aa11.82□□□□□ -0.52
SP140-203ENST00000392045 TOPBP1Q92547 1522 aa11.82□□□□□ -0.52
SP140-203ENST00000392045 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
SP140-203ENST00000392045 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.52
SP140-203ENST00000392045 PODXL2Q9NZ53 605 aa11.81□□□□□ -0.52
SP140-203ENST00000392045 UBE2Q2Q8WVN8 375 aa11.81□□□□□ -0.52
SP140-203ENST00000392045 ATP1B4Q9UN42 357 aaPredicted RBP11.79□□□□□ -0.52
SP140-203ENST00000392045 WDR97A6NE52 1622 aa11.78□□□□□ -0.52
SP140-203ENST00000392045 POLA1P09884 1462 aaPredicted RBP11.78□□□□□ -0.52
SP140-203ENST00000392045 ABCA10Q8WWZ4 1543 aa11.78□□□□□ -0.52
SP140-203ENST00000392045 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
SP140-203ENST00000392045 THOC2Q8NI27 1593 aaKnown RBP11.76□□□□□ -0.53
SP140-203ENST00000392045 MRC2Q9UBG0 1479 aa11.75□□□□□ -0.53
SP140-203ENST00000392045 ZNF608Q9ULD9 1512 aaPredicted RBP11.75□□□□□ -0.53
SP140-203ENST00000392045 ARID3CA6NKF2 412 aa11.74□□□□□ -0.53
SP140-203ENST00000392045 ARAP1Q96P48 1450 aa11.74□□□□□ -0.53
SP140-203ENST00000392045 CHMP7Q8WUX9 453 aaPredicted RBP11.73□□□□□ -0.53
SP140-203ENST00000392045 CUL7Q14999 1698 aa11.71□□□□□ -0.53
SP140-203ENST00000392045 CLSPNQ9HAW4 1339 aa11.7□□□□□ -0.54
SP140-203ENST00000392045 IGF1RP08069 1367 aa11.7□□□□□ -0.54
SP140-203ENST00000392045 ABCA5Q8WWZ7 1642 aa11.7□□□□□ -0.54
SP140-203ENST00000392045 CARMIL1Q5VZK9 1371 aa11.68□□□□□ -0.54
SP140-203ENST00000392045 HNRNPUL2Q1KMD3 747 aaKnown RBP11.67□□□□□ -0.54
SP140-203ENST00000392045 TARBP1Q13395 1621 aaKnown RBP11.67□□□□□ -0.54
SP140-203ENST00000392045 WDR62O43379 1518 aa11.67□□□□□ -0.54
SP140-203ENST00000392045 RRBP1Q9P2E9 1410 aaKnown RBP11.67□□□□□ -0.54
SP140-203ENST00000392045 GAPVD1Q14C86 1478 aa11.64□□□□□ -0.55
SP140-203ENST00000392045 DHX57Q6P158 1386 aaKnown RBP11.64□□□□□ -0.55
SP140-203ENST00000392045 NCBP3Q53F19 620 aaKnown RBP11.64□□□□□ -0.55
SP140-203ENST00000392045 MIER1Q8N108 512 aa11.64□□□□□ -0.55
SP140-203ENST00000392045 PKNOX2Q96KN3 472 aa11.64□□□□□ -0.55
SP140-203ENST00000392045 CTTNBP2Q8WZ74 1663 aa11.59□□□□□ -0.55
SP140-203ENST00000392045 ARHGAP35Q9NRY4 1499 aa11.59□□□□□ -0.55
SP140-203ENST00000392045 PBRM1Q86U86 1689 aa11.59□□□□□ -0.55
SP140-203ENST00000392045 MAP3K1Q13233 1512 aa11.59□□□□□ -0.55
SP140-203ENST00000392045 IFT140Q96RY7 1462 aa11.58□□□□□ -0.56
SP140-203ENST00000392045 KANK4Q5T7N3 995 aaPredicted RBP11.55□□□□□ -0.56
SP140-203ENST00000392045 SNAPC4Q5SXM2 1469 aa11.55□□□□□ -0.56
SP140-203ENST00000392045 TIAM1Q13009 1591 aa11.54□□□□□ -0.56
SP140-203ENST00000392045 EFCAB5A4FU69 1503 aa11.54□□□□□ -0.56
SP140-203ENST00000392045 YTHDC1Q96MU7 727 aaKnown RBP11.54□□□□□ -0.56
SP140-203ENST00000392045 CFAP43Q8NDM7 1665 aa11.53□□□□□ -0.56
SP140-203ENST00000392045 CCNB3Q8WWL7 1395 aa11.52□□□□□ -0.56
SP140-203ENST00000392045 ADAMTS12P58397 1594 aa11.52□□□□□ -0.57
SP140-203ENST00000392045 KLHL34Q8N239 644 aa11.5□□□□□ -0.57
SP140-203ENST00000392045 GRIN2BQ13224 1484 aa11.5□□□□□ -0.57
SP140-203ENST00000392045 MAPKBP1O60336 1514 aa11.5□□□□□ -0.57
SP140-203ENST00000392045 FHAD1B1AJZ9 1412 aa11.49□□□□□ -0.57
SP140-203ENST00000392045 JPH4Q96JJ6 628 aa11.48□□□□□ -0.57
SP140-203ENST00000392045 EIF4G3O43432 1585 aaKnown RBP11.47□□□□□ -0.57
SP140-203ENST00000392045 SAMD9Q5K651 1589 aa11.47□□□□□ -0.57
SP140-203ENST00000392045 CCDC136Q96JN2 1154 aa11.47□□□□□ -0.57
SP140-203ENST00000392045 LRRC9Q6ZRR7 1453 aa11.45□□□□□ -0.58
SP140-203ENST00000392045 SALL2Q9Y467 1007 aaPredicted RBP11.45□□□□□ -0.58
SP140-203ENST00000392045 FHOD3Q2V2M9 1422 aa11.44□□□□□ -0.58
SP140-203ENST00000392045 ITGAEP38570 1179 aa11.43□□□□□ -0.58
SP140-203ENST00000392045 OSCARQ8IYS5 282 aa11.43□□□□□ -0.58
SP140-203ENST00000392045 PCF11O94913 1555 aaKnown RBP11.43□□□□□ -0.58
SP140-203ENST00000392045 MAGI1Q96QZ7 1491 aaPredicted RBP11.43□□□□□ -0.58
SP140-203ENST00000392045 RAB3GAP2Q9H2M9 1393 aa11.42□□□□□ -0.58
SP140-203ENST00000392045 ARXQ96QS3 562 aa11.42□□□□□ -0.58
SP140-203ENST00000392045 NEFLP07196 543 aa11.41□□□□□ -0.58
SP140-203ENST00000392045 FYCO1Q9BQS8 1478 aa11.4□□□□□ -0.58
SP140-203ENST00000392045 IQGAP2Q13576 1575 aa11.4□□□□□ -0.58
SP140-203ENST00000392045 SETD5Q9C0A6 1442 aa11.39□□□□□ -0.59
SP140-203ENST00000392045 CYB5RLQ6IPT4 315 aa11.39□□□□□ -0.59
SP140-203ENST00000392045 FMN1Q68DA7 1419 aa11.38□□□□□ -0.59
SP140-203ENST00000392045 PHLDB1Q86UU1 1377 aa11.38□□□□□ -0.59
SP140-203ENST00000392045 UGGT2Q9NYU1 1516 aa11.37□□□□□ -0.59
SP140-203ENST00000392045 CASKIN1Q8WXD9 1431 aa11.37□□□□□ -0.59
SP140-203ENST00000392045 PDIA4P13667 645 aaKnown RBP11.37□□□□□ -0.59
SP140-203ENST00000392045 GRIN2AQ12879 1464 aa11.37□□□□□ -0.59
SP140-203ENST00000392045 PLPPR3Q6T4P5 718 aa11.37□□□□□ -0.59
SP140-203ENST00000392045 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.36□□□□□ -0.59
SP140-203ENST00000392045 SYNJ2O15056 1496 aa11.36□□□□□ -0.59
SP140-203ENST00000392045 PDE4CQ08493 712 aa11.35□□□□□ -0.59
SP140-203ENST00000392045 KCNH8Q96L42 1107 aa11.35□□□□□ -0.59
SP140-203ENST00000392045 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
SP140-203ENST00000392045 KIAA0586Q9BVV6 1533 aa11.34□□□□□ -0.59
SP140-203ENST00000392045 RTN4Q9NQC3 1192 aaKnown RBP11.33□□□□□ -0.6
SP140-203ENST00000392045 TIMELESSQ9UNS1 1208 aa11.33□□□□□ -0.6
SP140-203ENST00000392045 LRRIQ1Q96JM4 1722 aa11.32□□□□□ -0.6
SP140-203ENST00000392045 PRG4Q92954 1404 aaPredicted RBP11.32□□□□□ -0.6
SP140-203ENST00000392045 NUP160Q12769 1436 aa11.29□□□□□ -0.6
SP140-203ENST00000392045 KIAA0556O60303 1618 aa11.29□□□□□ -0.6
SP140-203ENST00000392045 CEP170Q5SW79 1584 aa11.29□□□□□ -0.6
SP140-203ENST00000392045 ERICH6BQ5W0A0 696 aa11.29□□□□□ -0.6
SP140-203ENST00000392045 HECW1Q76N89 1606 aa11.29□□□□□ -0.6
SP140-203ENST00000392045 FAM50AQ14320 339 aaKnown RBP11.28□□□□□ -0.6
SP140-203ENST00000392045 CCDC18Q5T9S5 1454 aa11.28□□□□□ -0.6
SP140-203ENST00000392045 ZNF777Q9ULD5 760 aaPredicted RBP11.28□□□□□ -0.6
SP140-203ENST00000392045 DISP1Q96F81 1524 aa11.25□□□□□ -0.61
SP140-203ENST00000392045 PTPN23Q9H3S7 1636 aa11.25□□□□□ -0.61
SP140-203ENST00000392045 PTPRGP23470 1445 aa11.25□□□□□ -0.61
SP140-203ENST00000392045 FGD6Q6ZV73 1430 aa11.24□□□□□ -0.61
SP140-203ENST00000392045 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms