RNA–Protein interactions for RNA: ENST00000392045.7

SP140-203, Transcript of SP140 nuclear body protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SP140, Length 3,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-203ENST00000392045 NISCHQ9Y2I1 1504 aa16.64■□□□□ 0.25
SP140-203ENST00000392045 CCDC180Q9P1Z9 1646 aa14.57□□□□□ -0.08
SP140-203ENST00000392045 DCAF8L2P0C7V8 631 aa14.48□□□□□ -0.09
SP140-203ENST00000392045 ABCC9O60706 1549 aa14.08□□□□□ -0.16
SP140-203ENST00000392045 PELP1Q8IZL8 1130 aaKnown RBP14.04□□□□□ -0.16
SP140-203ENST00000392045 ZCCHC6Q5VYS8 1495 aaKnown RBP14.03□□□□□ -0.16
SP140-203ENST00000392045 SHROOM4Q9ULL8 1493 aa13.95□□□□□ -0.18
SP140-203ENST00000392045 MYT1Q01538 1121 aa13.93□□□□□ -0.18
SP140-203ENST00000392045 DCAF1Q9Y4B6 1507 aa13.87□□□□□ -0.19
SP140-203ENST00000392045 MYO15BQ96JP2 1530 aa13.68□□□□□ -0.22
SP140-203ENST00000392045 PABPN1Q86U42 306 aaKnown RBP eCLIP13.51□□□□□ -0.25
SP140-203ENST00000392045 NACADO15069 1562 aa13.49□□□□□ -0.25
SP140-203ENST00000392045 TTBK1Q5TCY1 1321 aaPredicted RBP13.44□□□□□ -0.26
SP140-203ENST00000392045 SUPT5HO00267 1087 aaKnown RBP13.4□□□□□ -0.26
SP140-203ENST00000392045 SCRIBQ14160 1630 aa13.34□□□□□ -0.27
SP140-203ENST00000392045 RB1CC1Q8TDY2 1594 aa13.32□□□□□ -0.28
SP140-203ENST00000392045 SLC24A1O60721 1099 aa13.24□□□□□ -0.29
SP140-203ENST00000392045 CHIC1Q5VXU3 224 aa13.22□□□□□ -0.29
SP140-203ENST00000392045 PRKCSHP14314 528 aaPredicted RBP13.21□□□□□ -0.29
SP140-203ENST00000392045 UNC13AQ9UPW8 1703 aa13.07□□□□□ -0.32
SP140-203ENST00000392045 HRCP23327 699 aa13.06□□□□□ -0.32
SP140-203ENST00000392045 ERICH6Q7L0X2 663 aa13.02□□□□□ -0.33
SP140-203ENST00000392045 CECR2Q9BXF3 1484 aa12.96□□□□□ -0.33
SP140-203ENST00000392045 AEBP2Q6ZN18 517 aaPredicted RBP12.94□□□□□ -0.34
SP140-203ENST00000392045 RSF1Q96T23 1441 aaPredicted RBP12.91□□□□□ -0.34
SP140-203ENST00000392045 BICRAQ9NZM4 1560 aa12.89□□□□□ -0.35
SP140-203ENST00000392045 APLP2Q06481 763 aa12.86□□□□□ -0.35
SP140-203ENST00000392045 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
SP140-203ENST00000392045 PCGF6Q9BYE7 350 aa12.86□□□□□ -0.35
SP140-203ENST00000392045 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
SP140-203ENST00000392045 SMARCA4P51532 1647 aa12.78□□□□□ -0.36
SP140-203ENST00000392045 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
SP140-203ENST00000392045 LOC105371045A0A1W2PR82 267 aa12.74□□□□□ -0.37
SP140-203ENST00000392045 WIZO95785 1651 aa12.72□□□□□ -0.37
SP140-203ENST00000392045 BCL11AQ9H165 835 aa12.72□□□□□ -0.37
SP140-203ENST00000392045 PEG3Q9GZU2 1588 aa12.69□□□□□ -0.38
SP140-203ENST00000392045 TRIM26Q12899 539 aaPredicted RBP12.68□□□□□ -0.38
SP140-203ENST00000392045 PPARGC1BQ86YN6 1023 aaKnown RBP12.66□□□□□ -0.38
SP140-203ENST00000392045 TOP2AP11388 1531 aaKnown RBP12.66□□□□□ -0.38
SP140-203ENST00000392045 EHMT2Q96KQ7 1210 aa12.6□□□□□ -0.39
SP140-203ENST00000392045 SMARCA2P51531 1590 aa12.56□□□□□ -0.4
SP140-203ENST00000392045 EIF4G1Q04637 1599 aaKnown RBP12.55□□□□□ -0.4
SP140-203ENST00000392045 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
SP140-203ENST00000392045 DAXXQ9UER7 740 aaPredicted RBP12.53□□□□□ -0.4
SP140-203ENST00000392045 FAM9AQ8IZU1 332 aaPredicted RBP12.5□□□□□ -0.41
SP140-203ENST00000392045 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
SP140-203ENST00000392045 ZEB1P37275 1124 aaPredicted RBP12.49□□□□□ -0.41
SP140-203ENST00000392045 SCAF1Q9H7N4 1312 aaKnown RBP12.47□□□□□ -0.41
SP140-203ENST00000392045 BAZ1BQ9UIG0 1483 aaKnown RBP12.47□□□□□ -0.41
SP140-203ENST00000392045 CCDC88BA6NC98 1476 aa12.46□□□□□ -0.42
SP140-203ENST00000392045 HMGXB3Q12766 1538 aa12.45□□□□□ -0.42
SP140-203ENST00000392045 CC2D2AQ9P2K1 1620 aa12.45□□□□□ -0.42
SP140-203ENST00000392045 NCAPD3P42695 1498 aa12.41□□□□□ -0.42
SP140-203ENST00000392045 DNAJC5Q9H3Z4 198 aa12.34□□□□□ -0.43
SP140-203ENST00000392045 EIF5BO60841 1220 aaKnown RBP12.29□□□□□ -0.44
SP140-203ENST00000392045 CUX2O14529 1486 aa12.28□□□□□ -0.44
SP140-203ENST00000392045 NESP48681 1621 aa12.27□□□□□ -0.45
SP140-203ENST00000392045 WRNQ14191 1432 aaPredicted RBP eCLIP12.26□□□□□ -0.45
SP140-203ENST00000392045 CENPBP07199 599 aaPredicted RBP12.24□□□□□ -0.45
SP140-203ENST00000392045 ABCC8Q09428 1581 aa12.24□□□□□ -0.45
SP140-203ENST00000392045 PRDM2Q13029 1718 aa12.22□□□□□ -0.45
SP140-203ENST00000392045 RANGAP1P46060 587 aaPredicted RBP12.2□□□□□ -0.46
SP140-203ENST00000392045 EEA1Q15075 1411 aa12.16□□□□□ -0.46
SP140-203ENST00000392045 CFTRP13569 1480 aa12.16□□□□□ -0.46
SP140-203ENST00000392045 CADPSQ9ULU8 1353 aa12.15□□□□□ -0.46
SP140-203ENST00000392045 CEP162Q5TB80 1403 aa12.14□□□□□ -0.47
SP140-203ENST00000392045 TNIKQ9UKE5 1360 aa12.13□□□□□ -0.47
SP140-203ENST00000392045 BIVM-ERCC5R4GMW8 1640 aa12.12□□□□□ -0.47
SP140-203ENST00000392045 SYNJ1O43426 1573 aa12.11□□□□□ -0.47
SP140-203ENST00000392045 SOGA1O94964 1423 aa12.1□□□□□ -0.47
SP140-203ENST00000392045 TOP2BQ02880 1626 aa12.1□□□□□ -0.47
SP140-203ENST00000392045 KIF21BO75037 1637 aa12.07□□□□□ -0.48
SP140-203ENST00000392045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.05□□□□□ -0.48
SP140-203ENST00000392045 GOLGA3Q08378 1498 aa12.05□□□□□ -0.48
SP140-203ENST00000392045 ERCC6Q03468 1493 aa12.05□□□□□ -0.48
SP140-203ENST00000392045 RUSC2Q8N2Y8 1516 aa12.04□□□□□ -0.48
SP140-203ENST00000392045 CCER1Q8TC90 406 aaPredicted RBP12.03□□□□□ -0.48
SP140-203ENST00000392045 FANCD2Q9BXW9 1451 aa12.03□□□□□ -0.48
SP140-203ENST00000392045 CSRNP3Q8WYN3 585 aa12□□□□□ -0.49
SP140-203ENST00000392045 LAMC3Q9Y6N6 1575 aa12□□□□□ -0.49
SP140-203ENST00000392045 CUX1P39880 1505 aa11.99□□□□□ -0.49
SP140-203ENST00000392045 UBTFP17480 764 aaKnown RBP11.99□□□□□ -0.49
SP140-203ENST00000392045 PLEKHG5O94827 1062 aa11.99□□□□□ -0.49
SP140-203ENST00000392045 CEP164Q9UPV0 1460 aa11.98□□□□□ -0.49
SP140-203ENST00000392045 FBLN2P98095 1184 aa11.98□□□□□ -0.49
SP140-203ENST00000392045 PDS5BQ9NTI5 1447 aa11.97□□□□□ -0.49
SP140-203ENST00000392045 ACIN1Q9UKV3 1341 aaKnown RBP11.95□□□□□ -0.5
SP140-203ENST00000392045 TDRD9Q8NDG6 1382 aaKnown RBP11.94□□□□□ -0.5
SP140-203ENST00000392045 RAD54L2Q9Y4B4 1467 aa11.92□□□□□ -0.5
SP140-203ENST00000392045 DIEXFQ68CQ4 756 aaKnown RBP11.92□□□□□ -0.5
SP140-203ENST00000392045 ANP32EQ9BTT0 268 aa11.9□□□□□ -0.51
SP140-203ENST00000392045 DNMBPQ6XZF7 1577 aa11.89□□□□□ -0.51
SP140-203ENST00000392045 VPS8Q8N3P4 1428 aa11.89□□□□□ -0.51
SP140-203ENST00000392045 NEUROD1Q13562 356 aa11.88□□□□□ -0.51
SP140-203ENST00000392045 ERICH3Q5RHP9 1530 aa11.87□□□□□ -0.51
SP140-203ENST00000392045 CLIP1P30622 1438 aa11.86□□□□□ -0.51
SP140-203ENST00000392045 URB2Q14146 1524 aaKnown RBP11.85□□□□□ -0.51
SP140-203ENST00000392045 FGD5Q6ZNL6 1462 aa11.84□□□□□ -0.51
SP140-203ENST00000392045 GTF3C3Q9Y5Q9 886 aa11.84□□□□□ -0.51
SP140-203ENST00000392045 KIF27Q86VH2 1401 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms