RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 FHAD1B1AJZ9 1412 aa28.92■■■□□ 2.22
ERCC2-203ENST00000391944 HNRNPUL2Q1KMD3 747 aaKnown RBP28.89■■■□□ 2.22
ERCC2-203ENST00000391944 WDR62O43379 1518 aa28.88■■■□□ 2.21
ERCC2-203ENST00000391944 TIAM1Q13009 1591 aa28.85■■■□□ 2.21
ERCC2-203ENST00000391944 PBRM1Q86U86 1689 aa28.84■■■□□ 2.21
ERCC2-203ENST00000391944 P3H3Q8IVL6 736 aa28.84■■■□□ 2.21
ERCC2-203ENST00000391944 FHOD3Q2V2M9 1422 aa28.81■■■□□ 2.2
ERCC2-203ENST00000391944 AQRO60306 1485 aaKnown RBP eCLIP28.81■■■□□ 2.29e-8■■■■■ 42.5
ERCC2-203ENST00000391944 IFT140Q96RY7 1462 aa28.81■■■□□ 2.2
ERCC2-203ENST00000391944 RRBP1Q9P2E9 1410 aaKnown RBP28.8■■■□□ 2.2
ERCC2-203ENST00000391944 PCF11O94913 1555 aaKnown RBP28.78■■■□□ 2.2
ERCC2-203ENST00000391944 GRIN2BQ13224 1484 aa28.75■■■□□ 2.19
ERCC2-203ENST00000391944 SAMD9Q5K651 1589 aa28.74■■■□□ 2.19
ERCC2-203ENST00000391944 LRRC9Q6ZRR7 1453 aa28.74■■■□□ 2.19
ERCC2-203ENST00000391944 FYCO1Q9BQS8 1478 aa28.74■■■□□ 2.19
ERCC2-203ENST00000391944 ERCC6Q03468 1493 aa28.73■■■□□ 2.19
ERCC2-203ENST00000391944 CASKIN1Q8WXD9 1431 aa28.73■■■□□ 2.19
ERCC2-203ENST00000391944 CFAP43Q8NDM7 1665 aa28.72■■■□□ 2.19
ERCC2-203ENST00000391944 ADAMTS12P58397 1594 aa28.72■■■□□ 2.19
ERCC2-203ENST00000391944 FMN1Q68DA7 1419 aa28.71■■■□□ 2.19
ERCC2-203ENST00000391944 ZNF608Q9ULD9 1512 aaPredicted RBP28.69■■■□□ 2.18
ERCC2-203ENST00000391944 CCNB3Q8WWL7 1395 aa28.67■■■□□ 2.18
ERCC2-203ENST00000391944 THOC2Q8NI27 1593 aaKnown RBP28.65■■■□□ 2.18
ERCC2-203ENST00000391944 ATP1B4Q9UN42 357 aaPredicted RBP28.62■■■□□ 2.17
ERCC2-203ENST00000391944 SNAPC4Q5SXM2 1469 aa28.61■■■□□ 2.17
ERCC2-203ENST00000391944 IQGAP2Q13576 1575 aa28.56■■■□□ 2.16
ERCC2-203ENST00000391944 EIF4G3O43432 1585 aaKnown RBP28.55■■■□□ 2.16
ERCC2-203ENST00000391944 PHLDB1Q86UU1 1377 aa28.53■■■□□ 2.16
ERCC2-203ENST00000391944 LRRIQ1Q96JM4 1722 aa28.44■■■□□ 2.14
ERCC2-203ENST00000391944 UGGT2Q9NYU1 1516 aa28.44■■■□□ 2.14
ERCC2-203ENST00000391944 GRIN2AQ12879 1464 aa28.42■■■□□ 2.14
ERCC2-203ENST00000391944 MAGI1Q96QZ7 1491 aaPredicted RBP28.42■■■□□ 2.14
ERCC2-203ENST00000391944 KIAA0586Q9BVV6 1533 aa28.42■■■□□ 2.14
ERCC2-203ENST00000391944 CLSPNQ9HAW4 1339 aa28.41■■■□□ 2.14
ERCC2-203ENST00000391944 DHX57Q6P158 1386 aaKnown RBP28.39■■■□□ 2.14
ERCC2-203ENST00000391944 ITGAEP38570 1179 aa28.38■■■□□ 2.13
ERCC2-203ENST00000391944 MTUS2Q5JR59 1369 aa28.37■■■□□ 2.13
ERCC2-203ENST00000391944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.35■■■□□ 2.13
ERCC2-203ENST00000391944 SYNJ2O15056 1496 aa28.32■■■□□ 2.12
ERCC2-203ENST00000391944 CCDC18Q5T9S5 1454 aa28.32■■■□□ 2.12
ERCC2-203ENST00000391944 FAM50AQ14320 339 aaKnown RBP28.32■■■□□ 2.12
ERCC2-203ENST00000391944 HECW1Q76N89 1606 aa28.31■■■□□ 2.12
ERCC2-203ENST00000391944 CHMP7Q8WUX9 453 aaPredicted RBP28.29■■■□□ 2.12
ERCC2-203ENST00000391944 EHBP1L1Q8N3D4 1523 aa28.28■■■□□ 2.12
ERCC2-203ENST00000391944 DISP1Q96F81 1524 aa28.27■■■□□ 2.12
ERCC2-203ENST00000391944 FGD6Q6ZV73 1430 aa28.26■■■□□ 2.11
ERCC2-203ENST00000391944 KIAA0556O60303 1618 aa28.26■■■□□ 2.11
ERCC2-203ENST00000391944 SUPT6HQ7KZ85 1726 aaKnown RBP28.25■■■□□ 2.11
ERCC2-203ENST00000391944 RAB3GAP2Q9H2M9 1393 aa28.25■■■□□ 2.11
ERCC2-203ENST00000391944 NCOA2Q15596 1464 aa28.24■■■□□ 2.11
ERCC2-203ENST00000391944 SETD5Q9C0A6 1442 aa28.24■■■□□ 2.11
ERCC2-203ENST00000391944 EPRSP07814 1512 aaKnown RBP28.23■■■□□ 2.11
ERCC2-203ENST00000391944 CEP170Q5SW79 1584 aa28.22■■■□□ 2.11
ERCC2-203ENST00000391944 MAGI3Q5TCQ9 1506 aa28.2■■■□□ 2.11
ERCC2-203ENST00000391944 MYOM3Q5VTT5 1437 aa28.18■■■□□ 2.1
ERCC2-203ENST00000391944 ARHGEF11O15085 1522 aa28.18■■■□□ 2.1
ERCC2-203ENST00000391944 NUP160Q12769 1436 aa28.17■■■□□ 2.1
ERCC2-203ENST00000391944 FBLN2P98095 1184 aa28.15■■■□□ 2.1
ERCC2-203ENST00000391944 ZNF316A6NFI3 1004 aaPredicted RBP28.15■■■□□ 2.1
ERCC2-203ENST00000391944 CDK13Q14004 1512 aaKnown RBP28.12■■■□□ 2.09
ERCC2-203ENST00000391944 RAPGEF6Q8TEU7 1601 aa28.07■■■□□ 2.08
ERCC2-203ENST00000391944 DIEXFQ68CQ4 756 aaKnown RBP28.07■■■□□ 2.08
ERCC2-203ENST00000391944 JPH4Q96JJ6 628 aa28.06■■■□□ 2.08
ERCC2-203ENST00000391944 NUP153P49790 1475 aaKnown RBP28.05■■■□□ 2.08
ERCC2-203ENST00000391944 PTPN23Q9H3S7 1636 aa28.04■■■□□ 2.08
ERCC2-203ENST00000391944 CARMIL2Q6F5E8 1435 aa28.03■■■□□ 2.08
ERCC2-203ENST00000391944 MAPKBP1O60336 1514 aa28.02■■■□□ 2.08
ERCC2-203ENST00000391944 PTPRKQ15262 1439 aa28.01■■■□□ 2.07
ERCC2-203ENST00000391944 TCOF1Q13428 1488 aaKnown RBP28■■■□□ 2.07
ERCC2-203ENST00000391944 ARID3CA6NKF2 412 aa27.99■■■□□ 2.07
ERCC2-203ENST00000391944 MIA2Q96PC5 1412 aa27.96■■■□□ 2.07
ERCC2-203ENST00000391944 HFM1A2PYH4 1435 aa27.96■■■□□ 2.07
ERCC2-203ENST00000391944 CDK11AQ9UQ88 783 aaPredicted RBP27.93■■■□□ 2.06
ERCC2-203ENST00000391944 PLB1Q6P1J6 1458 aa27.92■■■□□ 2.06
ERCC2-203ENST00000391944 NAIPQ13075 1403 aa27.88■■■□□ 2.05
ERCC2-203ENST00000391944 TROQ12816 1431 aaPredicted RBP27.83■■■□□ 2.05
ERCC2-203ENST00000391944 CHD1O14646 1710 aa27.82■■■□□ 2.04
ERCC2-203ENST00000391944 ABCA8O94911 1581 aa27.81■■■□□ 2.04
ERCC2-203ENST00000391944 UACAQ9BZF9 1416 aa27.8■■■□□ 2.04
ERCC2-203ENST00000391944 PRG4Q92954 1404 aaPredicted RBP27.79■■■□□ 2.04
ERCC2-203ENST00000391944 AKNAQ7Z591 1439 aa27.79■■■□□ 2.04
ERCC2-203ENST00000391944 SIN3AQ96ST3 1273 aa27.75■■■□□ 2.03
ERCC2-203ENST00000391944 TIMELESSQ9UNS1 1208 aa27.75■■■□□ 2.03
ERCC2-203ENST00000391944 ADCY10Q96PN6 1610 aa27.74■■■□□ 2.03
ERCC2-203ENST00000391944 GCC2Q8IWJ2 1684 aa27.74■■■□□ 2.03
ERCC2-203ENST00000391944 CHIC2Q9UKJ5 165 aa27.73■■■□□ 2.03
ERCC2-203ENST00000391944 RRP7BPQ9NSQ0 103 aa27.71■■■□□ 2.03
ERCC2-203ENST00000391944 PTPRGP23470 1445 aa27.69■■■□□ 2.02
ERCC2-203ENST00000391944 ATP10BO94823 1461 aa27.69■■■□□ 2.02
ERCC2-203ENST00000391944 NEUROD1Q13562 356 aa27.69■■■□□ 2.02
ERCC2-203ENST00000391944 DNMT1P26358 1616 aaKnown RBP27.68■■■□□ 2.02
ERCC2-203ENST00000391944 ITSN2Q9NZM3 1697 aa27.68■■■□□ 2.02
ERCC2-203ENST00000391944 SHROOM2Q13796 1616 aa27.68■■■□□ 2.02
ERCC2-203ENST00000391944 DAPK1P53355 1430 aa27.68■■■□□ 2.02
ERCC2-203ENST00000391944 KIF14Q15058 1648 aa27.67■■■□□ 2.02
ERCC2-203ENST00000391944 GPATCH8Q9UKJ3 1502 aaKnown RBP27.66■■■□□ 2.02
ERCC2-203ENST00000391944 ZNF644Q9H582 1327 aaPredicted RBP27.66■■■□□ 2.02
ERCC2-203ENST00000391944 PLEKHD1A6NEE1 506 aa27.66■■■□□ 2.02
ERCC2-203ENST00000391944 ABCC5O15440 1437 aa27.65■■■□□ 2.02
ERCC2-203ENST00000391944 ROCK1Q13464 1354 aa27.65■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms