RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 NISCHQ9Y2I1 1504 aa41.75■■■■■ 4.27
ERCC2-203ENST00000391944 CCDC180Q9P1Z9 1646 aa36.03■■■■□ 3.36
ERCC2-203ENST00000391944 ZCCHC6Q5VYS8 1495 aaKnown RBP35.18■■■■□ 3.22
ERCC2-203ENST00000391944 SHROOM4Q9ULL8 1493 aa34.6■■■■□ 3.13
ERCC2-203ENST00000391944 DCAF1Q9Y4B6 1507 aa34.47■■■■□ 3.11
ERCC2-203ENST00000391944 DCAF8L2P0C7V8 631 aa34.41■■■■□ 3.1
ERCC2-203ENST00000391944 MYO15BQ96JP2 1530 aa33.81■■■■□ 3
ERCC2-203ENST00000391944 SUPT5HO00267 1087 aaKnown RBP33.63■■■□□ 2.97
ERCC2-203ENST00000391944 ABCC9O60706 1549 aa33.63■■■□□ 2.97
ERCC2-203ENST00000391944 NACADO15069 1562 aa33.44■■■□□ 2.94
ERCC2-203ENST00000391944 SCRIBQ14160 1630 aa33.31■■■□□ 2.92
ERCC2-203ENST00000391944 RB1CC1Q8TDY2 1594 aa33.01■■■□□ 2.87
ERCC2-203ENST00000391944 RSF1Q96T23 1441 aaPredicted RBP32.67■■■□□ 2.82
ERCC2-203ENST00000391944 CHIC1Q5VXU3 224 aa32.51■■■□□ 2.79
ERCC2-203ENST00000391944 CECR2Q9BXF3 1484 aa32.45■■■□□ 2.78
ERCC2-203ENST00000391944 UNC13AQ9UPW8 1703 aa32.41■■■□□ 2.78
ERCC2-203ENST00000391944 MROH2BQ7Z745 1585 aa32.31■■■□□ 2.76
ERCC2-203ENST00000391944 BAZ1AQ9NRL2 1556 aaPredicted RBP32.16■■■□□ 2.74
ERCC2-203ENST00000391944 WIZO95785 1651 aa32.08■■■□□ 2.73
ERCC2-203ENST00000391944 BICRAQ9NZM4 1560 aa32.06■■■□□ 2.72
ERCC2-203ENST00000391944 SMARCA4P51532 1647 aa31.95■■■□□ 2.7
ERCC2-203ENST00000391944 PABPN1Q86U42 306 aaKnown RBP eCLIP31.9■■■□□ 2.7
ERCC2-203ENST00000391944 TOP2AP11388 1531 aaKnown RBP31.71■■■□□ 2.67
ERCC2-203ENST00000391944 TRIM41Q8WV44 630 aa31.54■■■□□ 2.64
ERCC2-203ENST00000391944 PEG3Q9GZU2 1588 aa31.51■■■□□ 2.63
ERCC2-203ENST00000391944 SMARCA2P51531 1590 aa31.46■■■□□ 2.63
ERCC2-203ENST00000391944 CCDC88BA6NC98 1476 aa31.46■■■□□ 2.63
ERCC2-203ENST00000391944 EIF4G1Q04637 1599 aaKnown RBP31.44■■■□□ 2.62
ERCC2-203ENST00000391944 LOC105371045A0A1W2PR82 267 aa31.34■■■□□ 2.61
ERCC2-203ENST00000391944 ATAD2BQ9ULI0 1458 aa31.29■■■□□ 2.6
ERCC2-203ENST00000391944 BAZ1BQ9UIG0 1483 aaKnown RBP31.13■■■□□ 2.57
ERCC2-203ENST00000391944 FAM9AQ8IZU1 332 aaPredicted RBP31.03■■■□□ 2.56
ERCC2-203ENST00000391944 ABCC8Q09428 1581 aa31.01■■■□□ 2.55
ERCC2-203ENST00000391944 NCAPD3P42695 1498 aa30.9■■■□□ 2.54
ERCC2-203ENST00000391944 HMGXB3Q12766 1538 aa30.87■■■□□ 2.53
ERCC2-203ENST00000391944 WRNQ14191 1432 aaPredicted RBP eCLIP30.71■■■□□ 2.51
ERCC2-203ENST00000391944 EHMT2Q96KQ7 1210 aa30.59■■■□□ 2.49
ERCC2-203ENST00000391944 SOGA1O94964 1423 aa30.58■■■□□ 2.49
ERCC2-203ENST00000391944 EEA1Q15075 1411 aa30.57■■■□□ 2.48
ERCC2-203ENST00000391944 SYNJ1O43426 1573 aa30.56■■■□□ 2.48
ERCC2-203ENST00000391944 PCGF6Q9BYE7 350 aa30.56■■■□□ 2.48
ERCC2-203ENST00000391944 RUSC2Q8N2Y8 1516 aa30.44■■■□□ 2.46
ERCC2-203ENST00000391944 CSRNP3Q8WYN3 585 aa30.42■■■□□ 2.46
ERCC2-203ENST00000391944 CC2D2AQ9P2K1 1620 aa30.41■■■□□ 2.46
ERCC2-203ENST00000391944 CFTRP13569 1480 aa30.39■■■□□ 2.46
ERCC2-203ENST00000391944 TOP2BQ02880 1626 aa30.36■■■□□ 2.45
ERCC2-203ENST00000391944 TRIM26Q12899 539 aaPredicted RBP30.36■■■□□ 2.45
ERCC2-203ENST00000391944 BIVM-ERCC5R4GMW8 1640 aa30.3■■■□□ 2.44
ERCC2-203ENST00000391944 TNIKQ9UKE5 1360 aa30.25■■■□□ 2.43
ERCC2-203ENST00000391944 PRDM2Q13029 1718 aa30.21■■■□□ 2.43
ERCC2-203ENST00000391944 GOLGA3Q08378 1498 aa30.2■■■□□ 2.42
ERCC2-203ENST00000391944 CADPSQ9ULU8 1353 aa30.17■■■□□ 2.42
ERCC2-203ENST00000391944 HRCP23327 699 aa30.17■■■□□ 2.42
ERCC2-203ENST00000391944 CUX1P39880 1505 aa30.15■■■□□ 2.42
ERCC2-203ENST00000391944 CEP162Q5TB80 1403 aa30.14■■■□□ 2.41
ERCC2-203ENST00000391944 KIF21BO75037 1637 aa30.14■■■□□ 2.41
ERCC2-203ENST00000391944 CEP164Q9UPV0 1460 aa30.13■■■□□ 2.41
ERCC2-203ENST00000391944 UBTFP17480 764 aaKnown RBP30.11■■■□□ 2.41
ERCC2-203ENST00000391944 RAPGEF2Q9Y4G8 1499 aa29.91■■■□□ 2.38
ERCC2-203ENST00000391944 KIF27Q86VH2 1401 aa29.87■■■□□ 2.37
ERCC2-203ENST00000391944 PRXQ9BXM0 1461 aa29.84■■■□□ 2.37
ERCC2-203ENST00000391944 FANCD2Q9BXW9 1451 aa29.84■■■□□ 2.37
ERCC2-203ENST00000391944 PPARGC1BQ86YN6 1023 aaKnown RBP29.82■■■□□ 2.36
ERCC2-203ENST00000391944 ERICH3Q5RHP9 1530 aa29.82■■■□□ 2.36
ERCC2-203ENST00000391944 CLIP1P30622 1438 aa29.76■■■□□ 2.35
ERCC2-203ENST00000391944 NESP48681 1621 aa29.74■■■□□ 2.35
ERCC2-203ENST00000391944 FGD5Q6ZNL6 1462 aa29.72■■■□□ 2.35
ERCC2-203ENST00000391944 LAMC3Q9Y6N6 1575 aa29.72■■■□□ 2.35
ERCC2-203ENST00000391944 CUX2O14529 1486 aa29.66■■■□□ 2.34
ERCC2-203ENST00000391944 DNMBPQ6XZF7 1577 aa29.65■■■□□ 2.34
ERCC2-203ENST00000391944 DNAJC5BQ9UF47 199 aa29.59■■■□□ 2.33
ERCC2-203ENST00000391944 IGF1RP08069 1367 aa29.58■■■□□ 2.33
ERCC2-203ENST00000391944 VPS8Q8N3P4 1428 aa29.58■■■□□ 2.33
ERCC2-203ENST00000391944 TOPBP1Q92547 1522 aa29.58■■■□□ 2.33
ERCC2-203ENST00000391944 POLA1P09884 1462 aaPredicted RBP29.49■■■□□ 2.31
ERCC2-203ENST00000391944 PDS5BQ9NTI5 1447 aa29.49■■■□□ 2.31
ERCC2-203ENST00000391944 RANGAP1P46060 587 aaPredicted RBP29.46■■■□□ 2.31
ERCC2-203ENST00000391944 ABCA10Q8WWZ4 1543 aa29.46■■■□□ 2.31
ERCC2-203ENST00000391944 ZEB1P37275 1124 aaPredicted RBP29.44■■■□□ 2.3
ERCC2-203ENST00000391944 TTBK1Q5TCY1 1321 aaPredicted RBP29.44■■■□□ 2.3
ERCC2-203ENST00000391944 URB2Q14146 1524 aaKnown RBP29.44■■■□□ 2.3
ERCC2-203ENST00000391944 RAD54L2Q9Y4B4 1467 aa29.44■■■□□ 2.3
ERCC2-203ENST00000391944 CARMIL1Q5VZK9 1371 aa29.43■■■□□ 2.3
ERCC2-203ENST00000391944 ARAP1Q96P48 1450 aa29.38■■■□□ 2.29
ERCC2-203ENST00000391944 KIF21AQ7Z4S6 1674 aa29.33■■■□□ 2.29
ERCC2-203ENST00000391944 APLP2Q06481 763 aa29.33■■■□□ 2.29
ERCC2-203ENST00000391944 WDR97A6NE52 1622 aa29.28■■■□□ 2.28
ERCC2-203ENST00000391944 ARHGAP35Q9NRY4 1499 aa29.27■■■□□ 2.28
ERCC2-203ENST00000391944 CUL7Q14999 1698 aa29.21■■■□□ 2.27
ERCC2-203ENST00000391944 ABCA5Q8WWZ7 1642 aa29.15■■■□□ 2.26
ERCC2-203ENST00000391944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.12■■■□□ 2.25
ERCC2-203ENST00000391944 TDRD9Q8NDG6 1382 aaKnown RBP29.11■■■□□ 2.25
ERCC2-203ENST00000391944 GAPVD1Q14C86 1478 aa29.1■■■□□ 2.25
ERCC2-203ENST00000391944 TARBP1Q13395 1621 aaKnown RBP29.08■■■□□ 2.25
ERCC2-203ENST00000391944 MRC2Q9UBG0 1479 aa29.06■■■□□ 2.24
ERCC2-203ENST00000391944 CCER1Q8TC90 406 aaPredicted RBP29.06■■■□□ 2.24
ERCC2-203ENST00000391944 KANK4Q5T7N3 995 aaPredicted RBP29■■■□□ 2.23
ERCC2-203ENST00000391944 CTTNBP2Q8WZ74 1663 aa28.99■■■□□ 2.23
ERCC2-203ENST00000391944 EFCAB5A4FU69 1503 aa28.93■■■□□ 2.22
ERCC2-203ENST00000391944 MAP3K1Q13233 1512 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms