RNA–Protein interactions for RNA: ENST00000381750.8

RCL1-204, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCL1, Length 2,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-204ENST00000381750 SYNJ2O15056 1496 aa24.84■■□□□ 1.57
RCL1-204ENST00000381750 GRIN2AQ12879 1464 aa24.82■■□□□ 1.56
RCL1-204ENST00000381750 CTTNBP2Q8WZ74 1663 aa24.73■■□□□ 1.55
RCL1-204ENST00000381750 ARHGAP35Q9NRY4 1499 aa24.73■■□□□ 1.55
RCL1-204ENST00000381750 P3H3Q8IVL6 736 aa24.73■■□□□ 1.55
RCL1-204ENST00000381750 ARAP1Q96P48 1450 aa24.69■■□□□ 1.54
RCL1-204ENST00000381750 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
RCL1-204ENST00000381750 NUP160Q12769 1436 aa24.65■■□□□ 1.54
RCL1-204ENST00000381750 KIAA0586Q9BVV6 1533 aa24.65■■□□□ 1.54
RCL1-204ENST00000381750 IQGAP2Q13576 1575 aa24.63■■□□□ 1.53
RCL1-204ENST00000381750 CHD1O14646 1710 aa24.62■■□□□ 1.53
RCL1-204ENST00000381750 VPS8Q8N3P4 1428 aa24.6■■□□□ 1.53
RCL1-204ENST00000381750 PPARGC1BQ86YN6 1023 aaKnown RBP24.59■■□□□ 1.53
RCL1-204ENST00000381750 FHOD3Q2V2M9 1422 aa24.59■■□□□ 1.53
RCL1-204ENST00000381750 JPH4Q96JJ6 628 aa24.54■■□□□ 1.52
RCL1-204ENST00000381750 EFCAB5A4FU69 1503 aa24.53■■□□□ 1.52
RCL1-204ENST00000381750 SAMD9Q5K651 1589 aa24.51■■□□□ 1.51
RCL1-204ENST00000381750 UGGT2Q9NYU1 1516 aa24.5■■□□□ 1.51
RCL1-204ENST00000381750 TTBK1Q5TCY1 1321 aaPredicted RBP24.47■■□□□ 1.51
RCL1-204ENST00000381750 DISP1Q96F81 1524 aa24.47■■□□□ 1.51
RCL1-204ENST00000381750 ATP1B4Q9UN42 357 aaPredicted RBP24.41■■□□□ 1.5
RCL1-204ENST00000381750 KIAA0556O60303 1618 aa24.39■■□□□ 1.49
RCL1-204ENST00000381750 APLP2Q06481 763 aa24.37■■□□□ 1.49
RCL1-204ENST00000381750 FMN1Q68DA7 1419 aa24.37■■□□□ 1.49
RCL1-204ENST00000381750 PRG4Q92954 1404 aaPredicted RBP24.37■■□□□ 1.49
RCL1-204ENST00000381750 OSCARQ8IYS5 282 aa24.35■■□□□ 1.49
RCL1-204ENST00000381750 CLASP1Q7Z460 1538 aa24.34■■□□□ 1.49
RCL1-204ENST00000381750 CARMIL2Q6F5E8 1435 aa24.34■■□□□ 1.49
RCL1-204ENST00000381750 PCF11O94913 1555 aaKnown RBP24.33■■□□□ 1.49
RCL1-204ENST00000381750 KANK4Q5T7N3 995 aaPredicted RBP24.31■■□□□ 1.48
RCL1-204ENST00000381750 CASKIN1Q8WXD9 1431 aa24.3■■□□□ 1.48
RCL1-204ENST00000381750 SHROOM2Q13796 1616 aa24.28■■□□□ 1.48
RCL1-204ENST00000381750 ERCC6L2Q5T890 1561 aa24.28■■□□□ 1.48
RCL1-204ENST00000381750 ARID3CA6NKF2 412 aa24.25■■□□□ 1.47
RCL1-204ENST00000381750 FYCO1Q9BQS8 1478 aa24.25■■□□□ 1.47
RCL1-204ENST00000381750 PLB1Q6P1J6 1458 aa24.21■■□□□ 1.47
RCL1-204ENST00000381750 PCGF6Q9BYE7 350 aa24.2■■□□□ 1.47
RCL1-204ENST00000381750 PTPRGP23470 1445 aa24.18■■□□□ 1.46
RCL1-204ENST00000381750 TRIM26Q12899 539 aaPredicted RBP24.17■■□□□ 1.46
RCL1-204ENST00000381750 TIAM1Q13009 1591 aa24.16■■□□□ 1.46
RCL1-204ENST00000381750 LRRIQ1Q96JM4 1722 aa24.13■■□□□ 1.45
RCL1-204ENST00000381750 MAP3K1Q13233 1512 aa24.12■■□□□ 1.45
RCL1-204ENST00000381750 NUP153P49790 1475 aaKnown RBP24.12■■□□□ 1.45
RCL1-204ENST00000381750 RAPGEF6Q8TEU7 1601 aa24.1■■□□□ 1.45
RCL1-204ENST00000381750 EPRSP07814 1512 aaKnown RBP24.1■■□□□ 1.45
RCL1-204ENST00000381750 LRRC9Q6ZRR7 1453 aa24.1■■□□□ 1.45
RCL1-204ENST00000381750 HECW1Q76N89 1606 aa24.09■■□□□ 1.45
RCL1-204ENST00000381750 CDK13Q14004 1512 aaKnown RBP24.09■■□□□ 1.45
RCL1-204ENST00000381750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.07■■□□□ 1.44
RCL1-204ENST00000381750 HNRNPUL2Q1KMD3 747 aaKnown RBP24.07■■□□□ 1.44
RCL1-204ENST00000381750 CFAP43Q8NDM7 1665 aa24.06■■□□□ 1.44
RCL1-204ENST00000381750 ABCA8O94911 1581 aa24.05■■□□□ 1.44
RCL1-204ENST00000381750 CCDC18Q5T9S5 1454 aa24.03■■□□□ 1.44
RCL1-204ENST00000381750 MTUS2Q5JR59 1369 aa24.02■■□□□ 1.44
RCL1-204ENST00000381750 UACAQ9BZF9 1416 aa24.02■■□□□ 1.44
RCL1-204ENST00000381750 MAGI3Q5TCQ9 1506 aa24■■□□□ 1.43
RCL1-204ENST00000381750 ATP10BO94823 1461 aa23.96■■□□□ 1.43
RCL1-204ENST00000381750 PHLDB1Q86UU1 1377 aa23.93■■□□□ 1.42
RCL1-204ENST00000381750 ABCC2Q92887 1545 aa23.91■■□□□ 1.42
RCL1-204ENST00000381750 CDK11AQ9UQ88 783 aaPredicted RBP23.9■■□□□ 1.42
RCL1-204ENST00000381750 ARHGEF11O15085 1522 aa23.89■■□□□ 1.42
RCL1-204ENST00000381750 EHBP1L1Q8N3D4 1523 aa23.88■■□□□ 1.41
RCL1-204ENST00000381750 NCOA2Q15596 1464 aa23.86■■□□□ 1.41
RCL1-204ENST00000381750 PLEKHD1A6NEE1 506 aa23.86■■□□□ 1.41
RCL1-204ENST00000381750 UHRF1BP1LA0JNW5 1464 aa23.84■■□□□ 1.41
RCL1-204ENST00000381750 TROQ12816 1431 aaPredicted RBP23.82■■□□□ 1.4
RCL1-204ENST00000381750 ADCY10Q96PN6 1610 aa23.81■■□□□ 1.4
RCL1-204ENST00000381750 CYB5RLQ6IPT4 315 aa23.81■■□□□ 1.4
RCL1-204ENST00000381750 RRBP1Q9P2E9 1410 aaKnown RBP23.8■■□□□ 1.4
RCL1-204ENST00000381750 SUPT6HQ7KZ85 1726 aaKnown RBP23.8■■□□□ 1.4
RCL1-204ENST00000381750 CCNB3Q8WWL7 1395 aa23.79■■□□□ 1.4
RCL1-204ENST00000381750 KDM5BQ9UGL1 1544 aa23.78■■□□□ 1.4
RCL1-204ENST00000381750 RIMBP3CA6NJZ7 1639 aa23.76■■□□□ 1.39
RCL1-204ENST00000381750 RIMBP3BA6NNM3 1639 aa23.76■■□□□ 1.39
RCL1-204ENST00000381750 RIMBP3Q9UFD9 1639 aa23.76■■□□□ 1.39
RCL1-204ENST00000381750 FAM50AQ14320 339 aaKnown RBP23.74■■□□□ 1.39
RCL1-204ENST00000381750 ZCCHC11Q5TAX3 1644 aaKnown RBP23.74■■□□□ 1.39
RCL1-204ENST00000381750 KIF14Q15058 1648 aa23.74■■□□□ 1.39
RCL1-204ENST00000381750 MYOM3Q5VTT5 1437 aa23.73■■□□□ 1.39
RCL1-204ENST00000381750 ITGAEP38570 1179 aa23.72■■□□□ 1.39
RCL1-204ENST00000381750 KCNH8Q96L42 1107 aa23.72■■□□□ 1.39
RCL1-204ENST00000381750 FGD6Q6ZV73 1430 aa23.72■■□□□ 1.39
RCL1-204ENST00000381750 NPM1P06748 294 aaKnown RBP eCLIP23.66■■□□□ 1.38
RCL1-204ENST00000381750 ABCC10Q5T3U5 1492 aa23.63■■□□□ 1.37
RCL1-204ENST00000381750 GPATCH8Q9UKJ3 1502 aaKnown RBP23.63■■□□□ 1.37
RCL1-204ENST00000381750 ZNF644Q9H582 1327 aaPredicted RBP23.63■■□□□ 1.37
RCL1-204ENST00000381750 CFDP1Q9UEE9 299 aaPredicted RBP23.61■■□□□ 1.37
RCL1-204ENST00000381750 ASXL2Q76L83 1435 aa23.6■■□□□ 1.37
RCL1-204ENST00000381750 ZNF777Q9ULD5 760 aaPredicted RBP23.59■■□□□ 1.37
RCL1-204ENST00000381750 MIA2Q96PC5 1412 aa23.58■■□□□ 1.37
RCL1-204ENST00000381750 WDR7Q9Y4E6 1490 aa23.58■■□□□ 1.36
RCL1-204ENST00000381750 PTPN23Q9H3S7 1636 aa23.57■■□□□ 1.36
RCL1-204ENST00000381750 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.57■■□□□ 1.36
RCL1-204ENST00000381750 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.56■■□□□ 1.361e-8■■■■■ 45.3
RCL1-204ENST00000381750 TTC37Q6PGP7 1564 aa23.54■■□□□ 1.36
RCL1-204ENST00000381750 TCOF1Q13428 1488 aaKnown RBP23.53■■□□□ 1.36
RCL1-204ENST00000381750 CDC42BPAQ5VT25 1732 aa23.52■■□□□ 1.36
RCL1-204ENST00000381750 PTPRKQ15262 1439 aa23.51■■□□□ 1.35
RCL1-204ENST00000381750 ITSN2Q9NZM3 1697 aa23.48■■□□□ 1.35
RCL1-204ENST00000381750 CAMSAP2Q08AD1 1489 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms