RNA–Protein interactions for RNA: ENST00000381750.8

RCL1-204, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCL1, Length 2,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-204ENST00000381750 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
RCL1-204ENST00000381750 CCDC180Q9P1Z9 1646 aa31.31■■■□□ 2.6
RCL1-204ENST00000381750 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
RCL1-204ENST00000381750 ABCC9O60706 1549 aa30.1■■■□□ 2.41
RCL1-204ENST00000381750 DCAF8L2P0C7V8 631 aa29.99■■■□□ 2.39
RCL1-204ENST00000381750 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
RCL1-204ENST00000381750 MYO15BQ96JP2 1530 aa29.35■■■□□ 2.29
RCL1-204ENST00000381750 SHROOM4Q9ULL8 1493 aa29.31■■■□□ 2.28
RCL1-204ENST00000381750 NACADO15069 1562 aa29.29■■■□□ 2.28
RCL1-204ENST00000381750 RB1CC1Q8TDY2 1594 aa29.12■■■□□ 2.25
RCL1-204ENST00000381750 SCRIBQ14160 1630 aa28.93■■■□□ 2.22
RCL1-204ENST00000381750 UNC13AQ9UPW8 1703 aa28.53■■■□□ 2.16
RCL1-204ENST00000381750 PABPN1Q86U42 306 aaKnown RBP eCLIP28.43■■■□□ 2.14
RCL1-204ENST00000381750 BICRAQ9NZM4 1560 aa28.32■■■□□ 2.12
RCL1-204ENST00000381750 SUPT5HO00267 1087 aaKnown RBP28.06■■■□□ 2.08
RCL1-204ENST00000381750 CECR2Q9BXF3 1484 aa28.05■■■□□ 2.08
RCL1-204ENST00000381750 RSF1Q96T23 1441 aaPredicted RBP27.82■■■□□ 2.04
RCL1-204ENST00000381750 MROH2BQ7Z745 1585 aa27.81■■■□□ 2.04
RCL1-204ENST00000381750 BAZ1AQ9NRL2 1556 aaPredicted RBP27.73■■■□□ 2.03
RCL1-204ENST00000381750 SMARCA4P51532 1647 aa27.65■■■□□ 2.02
RCL1-204ENST00000381750 WIZO95785 1651 aa27.54■■■□□ 2
RCL1-204ENST00000381750 EIF4G1Q04637 1599 aaKnown RBP27.48■■□□□ 1.99
RCL1-204ENST00000381750 ATAD2BQ9ULI0 1458 aa27.32■■□□□ 1.96
RCL1-204ENST00000381750 PEG3Q9GZU2 1588 aa27.28■■□□□ 1.96
RCL1-204ENST00000381750 SMARCA2P51531 1590 aa27.21■■□□□ 1.95
RCL1-204ENST00000381750 TOP2AP11388 1531 aaKnown RBP27.17■■□□□ 1.94
RCL1-204ENST00000381750 CC2D2AQ9P2K1 1620 aa27.15■■□□□ 1.94
RCL1-204ENST00000381750 BAZ1BQ9UIG0 1483 aaKnown RBP27.14■■□□□ 1.93
RCL1-204ENST00000381750 NCAPD3P42695 1498 aa27.1■■□□□ 1.93
RCL1-204ENST00000381750 CCDC88BA6NC98 1476 aa26.99■■□□□ 1.91
RCL1-204ENST00000381750 HMGXB3Q12766 1538 aa26.97■■□□□ 1.91
RCL1-204ENST00000381750 DNAJC5BQ9UF47 199 aa26.93■■□□□ 1.9
RCL1-204ENST00000381750 CHIC1Q5VXU3 224 aa26.66■■□□□ 1.86
RCL1-204ENST00000381750 CFTRP13569 1480 aa26.44■■□□□ 1.82
RCL1-204ENST00000381750 CADPSQ9ULU8 1353 aa26.43■■□□□ 1.82
RCL1-204ENST00000381750 ABCC8Q09428 1581 aa26.35■■□□□ 1.81
RCL1-204ENST00000381750 NESP48681 1621 aa26.35■■□□□ 1.81
RCL1-204ENST00000381750 TRIM41Q8WV44 630 aa26.34■■□□□ 1.81
RCL1-204ENST00000381750 WRNQ14191 1432 aaPredicted RBP eCLIP26.18■■□□□ 1.78
RCL1-204ENST00000381750 LAMC3Q9Y6N6 1575 aa26.17■■□□□ 1.78
RCL1-204ENST00000381750 FANCD2Q9BXW9 1451 aa26.13■■□□□ 1.77
RCL1-204ENST00000381750 PRDM2Q13029 1718 aa26.11■■□□□ 1.77
RCL1-204ENST00000381750 SYNJ1O43426 1573 aa26.07■■□□□ 1.76
RCL1-204ENST00000381750 PDS5BQ9NTI5 1447 aa26.03■■□□□ 1.76
RCL1-204ENST00000381750 CUX1P39880 1505 aa25.99■■□□□ 1.75
RCL1-204ENST00000381750 CEP164Q9UPV0 1460 aa25.96■■□□□ 1.75
RCL1-204ENST00000381750 FAM9AQ8IZU1 332 aaPredicted RBP25.95■■□□□ 1.74
RCL1-204ENST00000381750 TOP2BQ02880 1626 aa25.93■■□□□ 1.74
RCL1-204ENST00000381750 KIF21AQ7Z4S6 1674 aa25.91■■□□□ 1.74
RCL1-204ENST00000381750 BIVM-ERCC5R4GMW8 1640 aa25.87■■□□□ 1.73
RCL1-204ENST00000381750 SOGA1O94964 1423 aa25.84■■□□□ 1.73
RCL1-204ENST00000381750 URB2Q14146 1524 aaKnown RBP25.83■■□□□ 1.73
RCL1-204ENST00000381750 TOPBP1Q92547 1522 aa25.8■■□□□ 1.72
RCL1-204ENST00000381750 ERCC6Q03468 1493 aa25.79■■□□□ 1.72
RCL1-204ENST00000381750 RUSC2Q8N2Y8 1516 aa25.77■■□□□ 1.72
RCL1-204ENST00000381750 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
RCL1-204ENST00000381750 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
RCL1-204ENST00000381750 LOC105371045A0A1W2PR82 267 aa25.73■■□□□ 1.71
RCL1-204ENST00000381750 MRC2Q9UBG0 1479 aa25.7■■□□□ 1.71
RCL1-204ENST00000381750 POLA1P09884 1462 aaPredicted RBP25.68■■□□□ 1.7
RCL1-204ENST00000381750 EHMT2Q96KQ7 1210 aa25.67■■□□□ 1.7
RCL1-204ENST00000381750 RAD54L2Q9Y4B4 1467 aa25.65■■□□□ 1.7
RCL1-204ENST00000381750 CSRNP3Q8WYN3 585 aa25.59■■□□□ 1.69
RCL1-204ENST00000381750 WDR62O43379 1518 aa25.56■■□□□ 1.68
RCL1-204ENST00000381750 EEA1Q15075 1411 aa25.55■■□□□ 1.68
RCL1-204ENST00000381750 CUX2O14529 1486 aa25.55■■□□□ 1.68
RCL1-204ENST00000381750 THOC2Q8NI27 1593 aaKnown RBP25.55■■□□□ 1.68
RCL1-204ENST00000381750 KIF27Q86VH2 1401 aa25.52■■□□□ 1.68
RCL1-204ENST00000381750 ABCA10Q8WWZ4 1543 aa25.48■■□□□ 1.67
RCL1-204ENST00000381750 TDRD9Q8NDG6 1382 aaKnown RBP25.45■■□□□ 1.67
RCL1-204ENST00000381750 TARBP1Q13395 1621 aaKnown RBP25.41■■□□□ 1.66
RCL1-204ENST00000381750 IGF1RP08069 1367 aa25.39■■□□□ 1.65
RCL1-204ENST00000381750 WDR97A6NE52 1622 aa25.35■■□□□ 1.65
RCL1-204ENST00000381750 IFT140Q96RY7 1462 aa25.34■■□□□ 1.65
RCL1-204ENST00000381750 ZNF608Q9ULD9 1512 aaPredicted RBP25.32■■□□□ 1.64
RCL1-204ENST00000381750 AQRO60306 1485 aaKnown RBP eCLIP25.32■■□□□ 1.645e-7■■■■□ 25.2
RCL1-204ENST00000381750 AEBP2Q6ZN18 517 aaPredicted RBP25.3■■□□□ 1.64
RCL1-204ENST00000381750 GAPVD1Q14C86 1478 aa25.29■■□□□ 1.64
RCL1-204ENST00000381750 RAPGEF2Q9Y4G8 1499 aa25.29■■□□□ 1.64
RCL1-204ENST00000381750 PRXQ9BXM0 1461 aa25.28■■□□□ 1.64
RCL1-204ENST00000381750 UBTFP17480 764 aaKnown RBP25.28■■□□□ 1.64
RCL1-204ENST00000381750 ABCA5Q8WWZ7 1642 aa25.27■■□□□ 1.64
RCL1-204ENST00000381750 GOLGA3Q08378 1498 aa25.24■■□□□ 1.63
RCL1-204ENST00000381750 KIF21BO75037 1637 aa25.24■■□□□ 1.63
RCL1-204ENST00000381750 CARMIL1Q5VZK9 1371 aa25.24■■□□□ 1.63
RCL1-204ENST00000381750 ERICH3Q5RHP9 1530 aa25.15■■□□□ 1.62
RCL1-204ENST00000381750 TNIKQ9UKE5 1360 aa25.14■■□□□ 1.61
RCL1-204ENST00000381750 EIF4G3O43432 1585 aaKnown RBP25.13■■□□□ 1.61
RCL1-204ENST00000381750 GRIN2BQ13224 1484 aa25.11■■□□□ 1.61
RCL1-204ENST00000381750 PBRM1Q86U86 1689 aa25.07■■□□□ 1.6
RCL1-204ENST00000381750 RANGAP1P46060 587 aaPredicted RBP25.07■■□□□ 1.6
RCL1-204ENST00000381750 CUL7Q14999 1698 aa25.05■■□□□ 1.6
RCL1-204ENST00000381750 CEP162Q5TB80 1403 aa25.02■■□□□ 1.6
RCL1-204ENST00000381750 SNAPC4Q5SXM2 1469 aa25.01■■□□□ 1.59
RCL1-204ENST00000381750 FHAD1B1AJZ9 1412 aa25■■□□□ 1.59
RCL1-204ENST00000381750 ADAMTS12P58397 1594 aa24.96■■□□□ 1.59
RCL1-204ENST00000381750 FBLN2P98095 1184 aa24.92■■□□□ 1.58
RCL1-204ENST00000381750 MAGI1Q96QZ7 1491 aaPredicted RBP24.91■■□□□ 1.58
RCL1-204ENST00000381750 CLIP1P30622 1438 aa24.89■■□□□ 1.57
RCL1-204ENST00000381750 CHMP7Q8WUX9 453 aaPredicted RBP24.89■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms