RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 PBRM1Q86U86 1689 aa29.58■■■□□ 2.33
GMDS-201ENST00000380805 EFCAB5A4FU69 1503 aa29.58■■■□□ 2.33
GMDS-201ENST00000380805 APLP2Q06481 763 aa29.57■■■□□ 2.32
GMDS-201ENST00000380805 MAP3K1Q13233 1512 aa29.51■■■□□ 2.32
GMDS-201ENST00000380805 TTBK1Q5TCY1 1321 aaPredicted RBP29.5■■■□□ 2.31
GMDS-201ENST00000380805 GRIN2BQ13224 1484 aa29.47■■■□□ 2.31
GMDS-201ENST00000380805 ADAMTS12P58397 1594 aa29.44■■■□□ 2.3
GMDS-201ENST00000380805 FHAD1B1AJZ9 1412 aa29.44■■■□□ 2.3
GMDS-201ENST00000380805 SAMD9Q5K651 1589 aa29.4■■■□□ 2.3
GMDS-201ENST00000380805 TIAM1Q13009 1591 aa29.39■■■□□ 2.3
GMDS-201ENST00000380805 SNAPC4Q5SXM2 1469 aa29.38■■■□□ 2.29
GMDS-201ENST00000380805 CFAP43Q8NDM7 1665 aa29.36■■■□□ 2.29
GMDS-201ENST00000380805 PCF11O94913 1555 aaKnown RBP29.35■■■□□ 2.29
GMDS-201ENST00000380805 FYCO1Q9BQS8 1478 aa29.31■■■□□ 2.28
GMDS-201ENST00000380805 MAGI1Q96QZ7 1491 aaPredicted RBP29.3■■■□□ 2.28
GMDS-201ENST00000380805 KANK4Q5T7N3 995 aaPredicted RBP29.3■■■□□ 2.28
GMDS-201ENST00000380805 FHOD3Q2V2M9 1422 aa29.28■■■□□ 2.28
GMDS-201ENST00000380805 RRBP1Q9P2E9 1410 aaKnown RBP29.27■■■□□ 2.28
GMDS-201ENST00000380805 FBLN2P98095 1184 aa29.25■■■□□ 2.27
GMDS-201ENST00000380805 CASKIN1Q8WXD9 1431 aa29.25■■■□□ 2.27
GMDS-201ENST00000380805 FMN1Q68DA7 1419 aa29.24■■■□□ 2.27
GMDS-201ENST00000380805 SYNJ2O15056 1496 aa29.21■■■□□ 2.27
GMDS-201ENST00000380805 LRRC9Q6ZRR7 1453 aa29.21■■■□□ 2.27
GMDS-201ENST00000380805 CHMP7Q8WUX9 453 aaPredicted RBP29.21■■■□□ 2.27
GMDS-201ENST00000380805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.2■■■□□ 2.26
GMDS-201ENST00000380805 IQGAP2Q13576 1575 aa29.19■■■□□ 2.26
GMDS-201ENST00000380805 CHD1O14646 1710 aa29.17■■■□□ 2.26
GMDS-201ENST00000380805 CCER1Q8TC90 406 aaPredicted RBP29.14■■■□□ 2.26
GMDS-201ENST00000380805 GRIN2AQ12879 1464 aa29.1■■■□□ 2.25
GMDS-201ENST00000380805 P3H3Q8IVL6 736 aa29.1■■■□□ 2.25
GMDS-201ENST00000380805 UGGT2Q9NYU1 1516 aa29.09■■■□□ 2.25
GMDS-201ENST00000380805 CCNB3Q8WWL7 1395 aa29.05■■■□□ 2.24
GMDS-201ENST00000380805 LRRIQ1Q96JM4 1722 aa29.05■■■□□ 2.24
GMDS-201ENST00000380805 HNRNPUL2Q1KMD3 747 aaKnown RBP29.03■■■□□ 2.24
GMDS-201ENST00000380805 KIAA0586Q9BVV6 1533 aa29.03■■■□□ 2.24
GMDS-201ENST00000380805 OSCARQ8IYS5 282 aa29.02■■■□□ 2.24
GMDS-201ENST00000380805 CEP170Q5SW79 1584 aa28.97■■■□□ 2.23
GMDS-201ENST00000380805 NUP160Q12769 1436 aa28.95■■■□□ 2.22
GMDS-201ENST00000380805 PHLDB1Q86UU1 1377 aa28.94■■■□□ 2.22
GMDS-201ENST00000380805 HECW1Q76N89 1606 aa28.92■■■□□ 2.22
GMDS-201ENST00000380805 KIAA0556O60303 1618 aa28.91■■■□□ 2.22
GMDS-201ENST00000380805 CCDC18Q5T9S5 1454 aa28.9■■■□□ 2.22
GMDS-201ENST00000380805 DISP1Q96F81 1524 aa28.87■■■□□ 2.21
GMDS-201ENST00000380805 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.86■■■□□ 2.21
GMDS-201ENST00000380805 EHBP1L1Q8N3D4 1523 aa28.86■■■□□ 2.21
GMDS-201ENST00000380805 CLASP1Q7Z460 1538 aa28.84■■■□□ 2.21
GMDS-201ENST00000380805 SUPT6HQ7KZ85 1726 aaKnown RBP28.81■■■□□ 2.2
GMDS-201ENST00000380805 ATP1B4Q9UN42 357 aaPredicted RBP28.8■■■□□ 2.2
GMDS-201ENST00000380805 ARHGEF11O15085 1522 aa28.78■■■□□ 2.2
GMDS-201ENST00000380805 MTUS2Q5JR59 1369 aa28.77■■■□□ 2.2
GMDS-201ENST00000380805 CLSPNQ9HAW4 1339 aa28.76■■■□□ 2.19
GMDS-201ENST00000380805 EPRSP07814 1512 aaKnown RBP28.76■■■□□ 2.19
GMDS-201ENST00000380805 MAGI3Q5TCQ9 1506 aa28.74■■■□□ 2.19
GMDS-201ENST00000380805 NCOA2Q15596 1464 aa28.73■■■□□ 2.19
GMDS-201ENST00000380805 JPH4Q96JJ6 628 aa28.72■■■□□ 2.19
GMDS-201ENST00000380805 FGD6Q6ZV73 1430 aa28.72■■■□□ 2.19
GMDS-201ENST00000380805 DHX57Q6P158 1386 aaKnown RBP28.72■■■□□ 2.19
GMDS-201ENST00000380805 RAPGEF6Q8TEU7 1601 aa28.69■■■□□ 2.18
GMDS-201ENST00000380805 MYOM3Q5VTT5 1437 aa28.66■■■□□ 2.18
GMDS-201ENST00000380805 SHROOM2Q13796 1616 aa28.65■■■□□ 2.18
GMDS-201ENST00000380805 CDK13Q14004 1512 aaKnown RBP28.62■■■□□ 2.17
GMDS-201ENST00000380805 DNAJC5Q9H3Z4 198 aa28.62■■■□□ 2.17
GMDS-201ENST00000380805 NUP153P49790 1475 aaKnown RBP28.61■■■□□ 2.17
GMDS-201ENST00000380805 PRG4Q92954 1404 aaPredicted RBP28.6■■■□□ 2.17
GMDS-201ENST00000380805 ERCC6L2Q5T890 1561 aa28.59■■■□□ 2.17
GMDS-201ENST00000380805 CARMIL2Q6F5E8 1435 aa28.58■■■□□ 2.17
GMDS-201ENST00000380805 SETD5Q9C0A6 1442 aa28.58■■■□□ 2.17
GMDS-201ENST00000380805 RAB3GAP2Q9H2M9 1393 aa28.57■■■□□ 2.16
GMDS-201ENST00000380805 TCOF1Q13428 1488 aaKnown RBP28.55■■■□□ 2.16
GMDS-201ENST00000380805 FAM50AQ14320 339 aaKnown RBP28.55■■■□□ 2.16
GMDS-201ENST00000380805 PTPN23Q9H3S7 1636 aa28.55■■■□□ 2.16
GMDS-201ENST00000380805 ITGAEP38570 1179 aa28.52■■■□□ 2.16
GMDS-201ENST00000380805 MIA2Q96PC5 1412 aa28.48■■■□□ 2.15
GMDS-201ENST00000380805 RIMBP3CA6NJZ7 1639 aa28.48■■■□□ 2.15
GMDS-201ENST00000380805 RIMBP3BA6NNM3 1639 aa28.48■■■□□ 2.15
GMDS-201ENST00000380805 RIMBP3Q9UFD9 1639 aa28.48■■■□□ 2.15
GMDS-201ENST00000380805 ABCA8O94911 1581 aa28.46■■■□□ 2.15
GMDS-201ENST00000380805 MAPKBP1O60336 1514 aa28.43■■■□□ 2.14
GMDS-201ENST00000380805 PLB1Q6P1J6 1458 aa28.43■■■□□ 2.14
GMDS-201ENST00000380805 ADCY10Q96PN6 1610 aa28.43■■■□□ 2.14
GMDS-201ENST00000380805 HFM1A2PYH4 1435 aa28.42■■■□□ 2.14
GMDS-201ENST00000380805 PTPRKQ15262 1439 aa28.41■■■□□ 2.14
GMDS-201ENST00000380805 TROQ12816 1431 aaPredicted RBP28.36■■■□□ 2.13
GMDS-201ENST00000380805 CDK11AQ9UQ88 783 aaPredicted RBP28.35■■■□□ 2.13
GMDS-201ENST00000380805 AKNAQ7Z591 1439 aa28.34■■■□□ 2.13
GMDS-201ENST00000380805 GCC2Q8IWJ2 1684 aa28.33■■■□□ 2.13
GMDS-201ENST00000380805 CYB5RLQ6IPT4 315 aa28.32■■■□□ 2.12
GMDS-201ENST00000380805 ITSN2Q9NZM3 1697 aa28.31■■■□□ 2.12
GMDS-201ENST00000380805 PTPRGP23470 1445 aa28.3■■■□□ 2.12
GMDS-201ENST00000380805 NAIPQ13075 1403 aa28.3■■■□□ 2.12
GMDS-201ENST00000380805 ZNF316A6NFI3 1004 aaPredicted RBP28.26■■■□□ 2.11
GMDS-201ENST00000380805 DNMT1P26358 1616 aaKnown RBP28.25■■■□□ 2.11
GMDS-201ENST00000380805 KIF14Q15058 1648 aa28.24■■■□□ 2.11
GMDS-201ENST00000380805 ARID3CA6NKF2 412 aa28.23■■■□□ 2.11
GMDS-201ENST00000380805 ATP10BO94823 1461 aa28.22■■■□□ 2.11
GMDS-201ENST00000380805 UACAQ9BZF9 1416 aa28.21■■■□□ 2.11
GMDS-201ENST00000380805 GPATCH8Q9UKJ3 1502 aaKnown RBP28.16■■■□□ 2.1
GMDS-201ENST00000380805 DAPK1P53355 1430 aa28.15■■■□□ 2.1
GMDS-201ENST00000380805 ROCK1Q13464 1354 aa28.15■■■□□ 2.1
GMDS-201ENST00000380805 ABCC10Q5T3U5 1492 aa28.14■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms