RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 CARMIL2Q6F5E8 1435 aa10.08□□□□□ -0.8
FOCAD-202ENST00000380249 DNAJC5Q9H3Z4 198 aa10.06□□□□□ -0.8
FOCAD-202ENST00000380249 CLASP1Q7Z460 1538 aa10.04□□□□□ -0.8
FOCAD-202ENST00000380249 IQGAP2Q13576 1575 aa10.03□□□□□ -0.8
FOCAD-202ENST00000380249 CHD1O14646 1710 aa10.02□□□□□ -0.81
FOCAD-202ENST00000380249 UGGT2Q9NYU1 1516 aa10.01□□□□□ -0.81
FOCAD-202ENST00000380249 CEP170Q5SW79 1584 aa10□□□□□ -0.81
FOCAD-202ENST00000380249 PRG4Q92954 1404 aaPredicted RBP10□□□□□ -0.81
FOCAD-202ENST00000380249 EFCAB5A4FU69 1503 aa9.99□□□□□ -0.81
FOCAD-202ENST00000380249 SHROOM2Q13796 1616 aa9.97□□□□□ -0.81
FOCAD-202ENST00000380249 PTPRGP23470 1445 aa9.97□□□□□ -0.81
FOCAD-202ENST00000380249 CLIP1P30622 1438 aa9.97□□□□□ -0.81
FOCAD-202ENST00000380249 FMN1Q68DA7 1419 aa9.95□□□□□ -0.82
FOCAD-202ENST00000380249 ARHGEF11O15085 1522 aa9.95□□□□□ -0.82
FOCAD-202ENST00000380249 DISP1Q96F81 1524 aa9.92□□□□□ -0.82
FOCAD-202ENST00000380249 CEP162Q5TB80 1403 aa9.92□□□□□ -0.82
FOCAD-202ENST00000380249 CTTNBP2Q8WZ74 1663 aa9.92□□□□□ -0.82
FOCAD-202ENST00000380249 LOC105371045A0A1W2PR82 267 aa9.9□□□□□ -0.82
FOCAD-202ENST00000380249 NPM1P06748 294 aaKnown RBP eCLIP9.9□□□□□ -0.82
FOCAD-202ENST00000380249 KIAA0556O60303 1618 aa9.89□□□□□ -0.83
FOCAD-202ENST00000380249 SAMD9Q5K651 1589 aa9.89□□□□□ -0.83
FOCAD-202ENST00000380249 UACAQ9BZF9 1416 aa9.89□□□□□ -0.83
FOCAD-202ENST00000380249 ARHGAP35Q9NRY4 1499 aa9.89□□□□□ -0.83
FOCAD-202ENST00000380249 UHRF1BP1LA0JNW5 1464 aa9.88□□□□□ -0.83
FOCAD-202ENST00000380249 EHMT2Q96KQ7 1210 aa9.87□□□□□ -0.83
FOCAD-202ENST00000380249 CDK11AQ9UQ88 783 aaPredicted RBP9.87□□□□□ -0.83
FOCAD-202ENST00000380249 CYB5RLQ6IPT4 315 aa9.86□□□□□ -0.83
FOCAD-202ENST00000380249 ARAP1Q96P48 1450 aa9.86□□□□□ -0.83
FOCAD-202ENST00000380249 FHOD3Q2V2M9 1422 aa9.85□□□□□ -0.83
FOCAD-202ENST00000380249 VPS8Q8N3P4 1428 aa9.85□□□□□ -0.83
FOCAD-202ENST00000380249 P3H3Q8IVL6 736 aa9.84□□□□□ -0.83
FOCAD-202ENST00000380249 RANGAP1P46060 587 aaPredicted RBP9.84□□□□□ -0.83
FOCAD-202ENST00000380249 CASKIN1Q8WXD9 1431 aa9.83□□□□□ -0.84
FOCAD-202ENST00000380249 APLP2Q06481 763 aa9.83□□□□□ -0.84
FOCAD-202ENST00000380249 RIMBP3CA6NJZ7 1639 aa9.83□□□□□ -0.84
FOCAD-202ENST00000380249 RIMBP3BA6NNM3 1639 aa9.83□□□□□ -0.84
FOCAD-202ENST00000380249 RIMBP3Q9UFD9 1639 aa9.83□□□□□ -0.84
FOCAD-202ENST00000380249 ABCC2Q92887 1545 aa9.82□□□□□ -0.84
FOCAD-202ENST00000380249 KDM5BQ9UGL1 1544 aa9.81□□□□□ -0.84
FOCAD-202ENST00000380249 ERCC6L2Q5T890 1561 aa9.81□□□□□ -0.84
FOCAD-202ENST00000380249 FYCO1Q9BQS8 1478 aa9.8□□□□□ -0.84
FOCAD-202ENST00000380249 PLEKHD1A6NEE1 506 aa9.79□□□□□ -0.84
FOCAD-202ENST00000380249 ABCA8O94911 1581 aa9.79□□□□□ -0.84
FOCAD-202ENST00000380249 PLB1Q6P1J6 1458 aa9.79□□□□□ -0.84
FOCAD-202ENST00000380249 CCDC18Q5T9S5 1454 aa9.78□□□□□ -0.84
FOCAD-202ENST00000380249 MAP3K1Q13233 1512 aa9.77□□□□□ -0.85
FOCAD-202ENST00000380249 TTBK1Q5TCY1 1321 aaPredicted RBP9.76□□□□□ -0.85
FOCAD-202ENST00000380249 HECW1Q76N89 1606 aa9.76□□□□□ -0.85
FOCAD-202ENST00000380249 NUP153P49790 1475 aaKnown RBP9.76□□□□□ -0.85
FOCAD-202ENST00000380249 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.76□□□□□ -0.85
FOCAD-202ENST00000380249 HNRNPUL2Q1KMD3 747 aaKnown RBP9.76□□□□□ -0.85
FOCAD-202ENST00000380249 RAPGEF6Q8TEU7 1601 aa9.75□□□□□ -0.85
FOCAD-202ENST00000380249 MAPKBP1O60336 1514 aa9.74□□□□□ -0.85
FOCAD-202ENST00000380249 EPRSP07814 1512 aaKnown RBP9.74□□□□□ -0.85
FOCAD-202ENST00000380249 ATP10BO94823 1461 aa9.74□□□□□ -0.85
FOCAD-202ENST00000380249 ATP1B4Q9UN42 357 aaPredicted RBP9.73□□□□□ -0.85
FOCAD-202ENST00000380249 TROQ12816 1431 aaPredicted RBP9.72□□□□□ -0.85
FOCAD-202ENST00000380249 MTUS2Q5JR59 1369 aa9.72□□□□□ -0.85
FOCAD-202ENST00000380249 ASXL2Q76L83 1435 aa9.7□□□□□ -0.86
FOCAD-202ENST00000380249 WDR7Q9Y4E6 1490 aa9.7□□□□□ -0.86
FOCAD-202ENST00000380249 ADCY10Q96PN6 1610 aa9.69□□□□□ -0.86
FOCAD-202ENST00000380249 PHLDB1Q86UU1 1377 aa9.68□□□□□ -0.86
FOCAD-202ENST00000380249 PCF11O94913 1555 aaKnown RBP9.68□□□□□ -0.86
FOCAD-202ENST00000380249 ABCC10Q5T3U5 1492 aa9.67□□□□□ -0.86
FOCAD-202ENST00000380249 EHBP1L1Q8N3D4 1523 aa9.65□□□□□ -0.87
FOCAD-202ENST00000380249 TIAM1Q13009 1591 aa9.65□□□□□ -0.87
FOCAD-202ENST00000380249 GLI2P10070 1586 aa9.64□□□□□ -0.87
FOCAD-202ENST00000380249 FAM69CQ0P6D2 419 aa9.64□□□□□ -0.87
FOCAD-202ENST00000380249 EFCAB2Q5VUJ9 269 aa9.64□□□□□ -0.87
FOCAD-202ENST00000380249 ARID3CA6NKF2 412 aa9.63□□□□□ -0.87
FOCAD-202ENST00000380249 CDK13Q14004 1512 aaKnown RBP9.63□□□□□ -0.87
FOCAD-202ENST00000380249 ARAP3Q8WWN8 1544 aa9.63□□□□□ -0.87
FOCAD-202ENST00000380249 LRRC9Q6ZRR7 1453 aa9.63□□□□□ -0.87
FOCAD-202ENST00000380249 KCNH8Q96L42 1107 aa9.63□□□□□ -0.87
FOCAD-202ENST00000380249 CCNB3Q8WWL7 1395 aa9.62□□□□□ -0.87
FOCAD-202ENST00000380249 ZCCHC11Q5TAX3 1644 aaKnown RBP9.62□□□□□ -0.87
FOCAD-202ENST00000380249 TEX14Q8IWB6 1497 aa9.62□□□□□ -0.87
FOCAD-202ENST00000380249 RSPH4AQ5TD94 716 aa9.61□□□□□ -0.87
FOCAD-202ENST00000380249 CD109Q6YHK3 1445 aa9.61□□□□□ -0.87
FOCAD-202ENST00000380249 TRHP20396 242 aaPredicted RBP9.61□□□□□ -0.87
FOCAD-202ENST00000380249 MAGI3Q5TCQ9 1506 aa9.61□□□□□ -0.87
FOCAD-202ENST00000380249 MIA2Q96PC5 1412 aa9.6□□□□□ -0.87
FOCAD-202ENST00000380249 PLCH2O75038 1416 aa9.6□□□□□ -0.87
FOCAD-202ENST00000380249 NEO1Q92859 1461 aa9.59□□□□□ -0.87
FOCAD-202ENST00000380249 PLEKHH2Q8IVE3 1493 aa9.59□□□□□ -0.87
FOCAD-202ENST00000380249 CFDP1Q9UEE9 299 aaPredicted RBP9.59□□□□□ -0.87
FOCAD-202ENST00000380249 KIF14Q15058 1648 aa9.58□□□□□ -0.88
FOCAD-202ENST00000380249 NCOA2Q15596 1464 aa9.58□□□□□ -0.88
FOCAD-202ENST00000380249 CFAP43Q8NDM7 1665 aa9.58□□□□□ -0.88
FOCAD-202ENST00000380249 DIP2BQ9P265 1576 aa9.57□□□□□ -0.88
FOCAD-202ENST00000380249 KANK4Q5T7N3 995 aaPredicted RBP9.57□□□□□ -0.88
FOCAD-202ENST00000380249 MYOM3Q5VTT5 1437 aa9.57□□□□□ -0.88
FOCAD-202ENST00000380249 ABCA9Q8IUA7 1624 aa9.57□□□□□ -0.88
FOCAD-202ENST00000380249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.56□□□□□ -0.88
FOCAD-202ENST00000380249 KIAA1107Q9UPP5 1409 aa9.56□□□□□ -0.88
FOCAD-202ENST00000380249 GPATCH8Q9UKJ3 1502 aaKnown RBP9.55□□□□□ -0.88
FOCAD-202ENST00000380249 SUPT6HQ7KZ85 1726 aaKnown RBP9.54□□□□□ -0.88
FOCAD-202ENST00000380249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.54□□□□□ -0.88
FOCAD-202ENST00000380249 FANCAO15360 1455 aa9.52□□□□□ -0.89
FOCAD-202ENST00000380249 FGD6Q6ZV73 1430 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms