RNA–Protein interactions for RNA: ENST00000380249.5

FOCAD-202, Transcript of focadhesin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOCAD, Length 6,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-202ENST00000380249 NISCHQ9Y2I1 1504 aa14.62□□□□□ -0.07
FOCAD-202ENST00000380249 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
FOCAD-202ENST00000380249 ABCC9O60706 1549 aa12.38□□□□□ -0.43
FOCAD-202ENST00000380249 MYO15BQ96JP2 1530 aa12.23□□□□□ -0.45
FOCAD-202ENST00000380249 ZCCHC6Q5VYS8 1495 aaKnown RBP12.21□□□□□ -0.45
FOCAD-202ENST00000380249 DCAF1Q9Y4B6 1507 aa12.21□□□□□ -0.46
FOCAD-202ENST00000380249 NACADO15069 1562 aa12.14□□□□□ -0.47
FOCAD-202ENST00000380249 DCAF8L2P0C7V8 631 aa12.1□□□□□ -0.47
FOCAD-202ENST00000380249 RB1CC1Q8TDY2 1594 aa12.08□□□□□ -0.48
FOCAD-202ENST00000380249 SHROOM4Q9ULL8 1493 aa11.76□□□□□ -0.53
FOCAD-202ENST00000380249 SCRIBQ14160 1630 aa11.65□□□□□ -0.54
FOCAD-202ENST00000380249 BICRAQ9NZM4 1560 aa11.59□□□□□ -0.55
FOCAD-202ENST00000380249 PABPN1Q86U42 306 aaKnown RBP eCLIP11.58□□□□□ -0.56
FOCAD-202ENST00000380249 UNC13AQ9UPW8 1703 aa11.51□□□□□ -0.57
FOCAD-202ENST00000380249 BAZ1AQ9NRL2 1556 aaPredicted RBP11.36□□□□□ -0.59
FOCAD-202ENST00000380249 EIF4G1Q04637 1599 aaKnown RBP11.32□□□□□ -0.6
FOCAD-202ENST00000380249 CECR2Q9BXF3 1484 aa11.29□□□□□ -0.6
FOCAD-202ENST00000380249 SMARCA2P51531 1590 aa11.24□□□□□ -0.61
FOCAD-202ENST00000380249 NCAPD3P42695 1498 aa11.24□□□□□ -0.61
FOCAD-202ENST00000380249 SMARCA4P51532 1647 aa11.23□□□□□ -0.61
FOCAD-202ENST00000380249 RSF1Q96T23 1441 aaPredicted RBP11.21□□□□□ -0.62
FOCAD-202ENST00000380249 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
FOCAD-202ENST00000380249 ATAD2BQ9ULI0 1458 aa11.2□□□□□ -0.62
FOCAD-202ENST00000380249 MROH2BQ7Z745 1585 aa11.19□□□□□ -0.62
FOCAD-202ENST00000380249 CC2D2AQ9P2K1 1620 aa11.16□□□□□ -0.62
FOCAD-202ENST00000380249 HMGXB3Q12766 1538 aa11.16□□□□□ -0.62
FOCAD-202ENST00000380249 DNAJC5BQ9UF47 199 aa11.14□□□□□ -0.63
FOCAD-202ENST00000380249 BAZ1BQ9UIG0 1483 aaKnown RBP11.12□□□□□ -0.63
FOCAD-202ENST00000380249 SUPT5HO00267 1087 aaKnown RBP11.03□□□□□ -0.64
FOCAD-202ENST00000380249 TOP2AP11388 1531 aaKnown RBP11.03□□□□□ -0.64
FOCAD-202ENST00000380249 WIZO95785 1651 aa10.98□□□□□ -0.65
FOCAD-202ENST00000380249 CADPSQ9ULU8 1353 aa10.91□□□□□ -0.66
FOCAD-202ENST00000380249 CCDC88BA6NC98 1476 aa10.87□□□□□ -0.67
FOCAD-202ENST00000380249 CFTRP13569 1480 aa10.86□□□□□ -0.67
FOCAD-202ENST00000380249 PDS5BQ9NTI5 1447 aa10.85□□□□□ -0.67
FOCAD-202ENST00000380249 LAMC3Q9Y6N6 1575 aa10.84□□□□□ -0.67
FOCAD-202ENST00000380249 ERCC6Q03468 1493 aa10.72□□□□□ -0.69
FOCAD-202ENST00000380249 FANCD2Q9BXW9 1451 aa10.71□□□□□ -0.69
FOCAD-202ENST00000380249 NESP48681 1621 aa10.71□□□□□ -0.69
FOCAD-202ENST00000380249 ABCC8Q09428 1581 aa10.71□□□□□ -0.69
FOCAD-202ENST00000380249 CEP164Q9UPV0 1460 aa10.7□□□□□ -0.7
FOCAD-202ENST00000380249 MRC2Q9UBG0 1479 aa10.64□□□□□ -0.71
FOCAD-202ENST00000380249 WRNQ14191 1432 aaPredicted RBP eCLIP10.61□□□□□ -0.71
FOCAD-202ENST00000380249 CUX2O14529 1486 aa10.59□□□□□ -0.71
FOCAD-202ENST00000380249 PRDM2Q13029 1718 aa10.58□□□□□ -0.72
FOCAD-202ENST00000380249 DNMBPQ6XZF7 1577 aa10.56□□□□□ -0.72
FOCAD-202ENST00000380249 WDR62O43379 1518 aa10.56□□□□□ -0.72
FOCAD-202ENST00000380249 TOPBP1Q92547 1522 aa10.55□□□□□ -0.72
FOCAD-202ENST00000380249 URB2Q14146 1524 aaKnown RBP10.54□□□□□ -0.72
FOCAD-202ENST00000380249 THOC2Q8NI27 1593 aaKnown RBP10.52□□□□□ -0.73
FOCAD-202ENST00000380249 IFT140Q96RY7 1462 aa10.51□□□□□ -0.73
FOCAD-202ENST00000380249 KIF21AQ7Z4S6 1674 aa10.5□□□□□ -0.73
FOCAD-202ENST00000380249 TRIM41Q8WV44 630 aa10.5□□□□□ -0.73
FOCAD-202ENST00000380249 TOP2BQ02880 1626 aa10.48□□□□□ -0.73
FOCAD-202ENST00000380249 CUX1P39880 1505 aa10.48□□□□□ -0.73
FOCAD-202ENST00000380249 POLA1P09884 1462 aaPredicted RBP10.48□□□□□ -0.73
FOCAD-202ENST00000380249 SOGA1O94964 1423 aa10.47□□□□□ -0.73
FOCAD-202ENST00000380249 FGD5Q6ZNL6 1462 aa10.47□□□□□ -0.73
FOCAD-202ENST00000380249 CHIC1Q5VXU3 224 aa10.46□□□□□ -0.73
FOCAD-202ENST00000380249 BIVM-ERCC5R4GMW8 1640 aa10.44□□□□□ -0.74
FOCAD-202ENST00000380249 ABCA10Q8WWZ4 1543 aa10.44□□□□□ -0.74
FOCAD-202ENST00000380249 WDR97A6NE52 1622 aa10.43□□□□□ -0.74
FOCAD-202ENST00000380249 EEA1Q15075 1411 aa10.43□□□□□ -0.74
FOCAD-202ENST00000380249 SYNJ1O43426 1573 aa10.41□□□□□ -0.74
FOCAD-202ENST00000380249 KIF27Q86VH2 1401 aa10.41□□□□□ -0.74
FOCAD-202ENST00000380249 RAD54L2Q9Y4B4 1467 aa10.36□□□□□ -0.75
FOCAD-202ENST00000380249 TDRD9Q8NDG6 1382 aaKnown RBP10.36□□□□□ -0.75
FOCAD-202ENST00000380249 GRIN2BQ13224 1484 aa10.36□□□□□ -0.75
FOCAD-202ENST00000380249 GAPVD1Q14C86 1478 aa10.35□□□□□ -0.75
FOCAD-202ENST00000380249 TARBP1Q13395 1621 aaKnown RBP10.35□□□□□ -0.75
FOCAD-202ENST00000380249 MAGI1Q96QZ7 1491 aaPredicted RBP10.32□□□□□ -0.76
FOCAD-202ENST00000380249 ZNF608Q9ULD9 1512 aaPredicted RBP10.31□□□□□ -0.76
FOCAD-202ENST00000380249 CSRNP3Q8WYN3 585 aa10.31□□□□□ -0.76
FOCAD-202ENST00000380249 ERICH3Q5RHP9 1530 aa10.31□□□□□ -0.76
FOCAD-202ENST00000380249 AQRO60306 1485 aaKnown RBP eCLIP10.3□□□□□ -0.76
FOCAD-202ENST00000380249 IGF1RP08069 1367 aa10.29□□□□□ -0.76
FOCAD-202ENST00000380249 FHAD1B1AJZ9 1412 aa10.29□□□□□ -0.76
FOCAD-202ENST00000380249 ABCA5Q8WWZ7 1642 aa10.27□□□□□ -0.77
FOCAD-202ENST00000380249 CHMP7Q8WUX9 453 aaPredicted RBP10.26□□□□□ -0.77
FOCAD-202ENST00000380249 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
FOCAD-202ENST00000380249 CARMIL1Q5VZK9 1371 aa10.26□□□□□ -0.77
FOCAD-202ENST00000380249 SYNJ2O15056 1496 aa10.25□□□□□ -0.77
FOCAD-202ENST00000380249 OSCARQ8IYS5 282 aa10.23□□□□□ -0.77
FOCAD-202ENST00000380249 SNAPC4Q5SXM2 1469 aa10.22□□□□□ -0.77
FOCAD-202ENST00000380249 PRXQ9BXM0 1461 aa10.22□□□□□ -0.77
FOCAD-202ENST00000380249 RAPGEF2Q9Y4G8 1499 aa10.21□□□□□ -0.78
FOCAD-202ENST00000380249 CUL7Q14999 1698 aa10.2□□□□□ -0.78
FOCAD-202ENST00000380249 FBLN2P98095 1184 aa10.18□□□□□ -0.78
FOCAD-202ENST00000380249 GRIN2AQ12879 1464 aa10.18□□□□□ -0.78
FOCAD-202ENST00000380249 ADAMTS12P58397 1594 aa10.18□□□□□ -0.78
FOCAD-202ENST00000380249 NUP160Q12769 1436 aa10.17□□□□□ -0.78
FOCAD-202ENST00000380249 RUSC2Q8N2Y8 1516 aa10.16□□□□□ -0.78
FOCAD-202ENST00000380249 FAM9AQ8IZU1 332 aaPredicted RBP10.15□□□□□ -0.78
FOCAD-202ENST00000380249 KIAA0586Q9BVV6 1533 aa10.15□□□□□ -0.78
FOCAD-202ENST00000380249 GOLGA3Q08378 1498 aa10.14□□□□□ -0.79
FOCAD-202ENST00000380249 PBRM1Q86U86 1689 aa10.12□□□□□ -0.79
FOCAD-202ENST00000380249 KIF21BO75037 1637 aa10.12□□□□□ -0.79
FOCAD-202ENST00000380249 UBTFP17480 764 aaKnown RBP10.09□□□□□ -0.79
FOCAD-202ENST00000380249 JPH4Q96JJ6 628 aa10.08□□□□□ -0.8
FOCAD-202ENST00000380249 TNIKQ9UKE5 1360 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 260 ms