RNA–Protein interactions for RNA: ENST00000379540.7

NFX1-203, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFX1, Length 4,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-203ENST00000379540 CANXP27824 592 aaKnown RBP10.27□□□□□ -0.77
NFX1-203ENST00000379540 RAPGEF2Q9Y4G8 1499 aa10.26□□□□□ -0.77
NFX1-203ENST00000379540 TSPY4P0CV99 314 aa10.24□□□□□ -0.77
NFX1-203ENST00000379540 TSPY10P0CW01 314 aa10.24□□□□□ -0.77
NFX1-203ENST00000379540 ZNF777Q9ULD5 760 aaPredicted RBP10.24□□□□□ -0.77
NFX1-203ENST00000379540 PRXQ9BXM0 1461 aa10.24□□□□□ -0.77
NFX1-203ENST00000379540 VPS8Q8N3P4 1428 aa10.23□□□□□ -0.77
NFX1-203ENST00000379540 FANCD2Q9BXW9 1451 aa10.22□□□□□ -0.77
NFX1-203ENST00000379540 TONSLQ96HA7 1378 aa10.21□□□□□ -0.77
NFX1-203ENST00000379540 CUX2O14529 1486 aa10.2□□□□□ -0.78
NFX1-203ENST00000379540 P3H3Q8IVL6 736 aa10.19□□□□□ -0.78
NFX1-203ENST00000379540 CHMP7Q8WUX9 453 aaPredicted RBP10.19□□□□□ -0.78
NFX1-203ENST00000379540 LAMC3Q9Y6N6 1575 aa10.19□□□□□ -0.78
NFX1-203ENST00000379540 FGD5Q6ZNL6 1462 aa10.19□□□□□ -0.78
NFX1-203ENST00000379540 DNMBPQ6XZF7 1577 aa10.18□□□□□ -0.78
NFX1-203ENST00000379540 SLC24A1O60721 1099 aa10.17□□□□□ -0.78
NFX1-203ENST00000379540 MTUS2Q5JR59 1369 aa10.15□□□□□ -0.79
NFX1-203ENST00000379540 PDS5BQ9NTI5 1447 aa10.14□□□□□ -0.79
NFX1-203ENST00000379540 CHGAP10645 457 aaKnown RBP10.14□□□□□ -0.79
NFX1-203ENST00000379540 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.14□□□□□ -0.79
NFX1-203ENST00000379540 TOPBP1Q92547 1522 aa10.13□□□□□ -0.79
NFX1-203ENST00000379540 CARMIL1Q5VZK9 1371 aa10.13□□□□□ -0.79
NFX1-203ENST00000379540 IGF1RP08069 1367 aa10.12□□□□□ -0.79
NFX1-203ENST00000379540 PLEKHD1A6NEE1 506 aa10.11□□□□□ -0.79
NFX1-203ENST00000379540 ABCA10Q8WWZ4 1543 aa10.11□□□□□ -0.79
NFX1-203ENST00000379540 UPF2Q9HAU5 1272 aaKnown RBP10.11□□□□□ -0.79
NFX1-203ENST00000379540 ARAP1Q96P48 1450 aa10.09□□□□□ -0.79
NFX1-203ENST00000379540 NESP48681 1621 aa10.09□□□□□ -0.79
NFX1-203ENST00000379540 POLA1P09884 1462 aaPredicted RBP10.09□□□□□ -0.79
NFX1-203ENST00000379540 CDCA8Q53HL2 280 aa10.09□□□□□ -0.79
NFX1-203ENST00000379540 ARID3CA6NKF2 412 aa10.08□□□□□ -0.8
NFX1-203ENST00000379540 ANP32AP39687 249 aaKnown RBP10.08□□□□□ -0.8
NFX1-203ENST00000379540 CUL7Q14999 1698 aa10.08□□□□□ -0.8
NFX1-203ENST00000379540 EIF5BO60841 1220 aaKnown RBP10.08□□□□□ -0.8
NFX1-203ENST00000379540 NPM2Q86SE8 214 aaKnown RBP10.07□□□□□ -0.8
NFX1-203ENST00000379540 ANP32BQ92688 251 aaKnown RBP10.05□□□□□ -0.8
NFX1-203ENST00000379540 ARHGAP35Q9NRY4 1499 aa10.05□□□□□ -0.8
NFX1-203ENST00000379540 FHAD1B1AJZ9 1412 aa10.04□□□□□ -0.8
NFX1-203ENST00000379540 RAD54L2Q9Y4B4 1467 aa10.04□□□□□ -0.8
NFX1-203ENST00000379540 WDR43Q15061 677 aaKnown RBP eCLIP10.03□□□□□ -0.8
NFX1-203ENST00000379540 URB2Q14146 1524 aaKnown RBP10.03□□□□□ -0.8
NFX1-203ENST00000379540 EFCAB5A4FU69 1503 aa10.01□□□□□ -0.81
NFX1-203ENST00000379540 PPP1R15AO75807 674 aaPredicted RBP10.01□□□□□ -0.81
NFX1-203ENST00000379540 TMC1Q8TDI8 760 aa10.01□□□□□ -0.81
NFX1-203ENST00000379540 MAP3K1Q13233 1512 aa10.01□□□□□ -0.81
NFX1-203ENST00000379540 WDR97A6NE52 1622 aa10□□□□□ -0.81
NFX1-203ENST00000379540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10□□□□□ -0.814e-6■■■■□ 20.8
NFX1-203ENST00000379540 HDGFP51858 240 aaKnown RBP9.99□□□□□ -0.81
NFX1-203ENST00000379540 HSP90AA1P07900 732 aaKnown RBP9.99□□□□□ -0.81
NFX1-203ENST00000379540 MYH16Q9H6N6 1097 aa9.99□□□□□ -0.81
NFX1-203ENST00000379540 GAPVD1Q14C86 1478 aa9.99□□□□□ -0.81
NFX1-203ENST00000379540 KIF21AQ7Z4S6 1674 aa9.98□□□□□ -0.81
NFX1-203ENST00000379540 CTTNBP2Q8WZ74 1663 aa9.98□□□□□ -0.81
NFX1-203ENST00000379540 CFAP53Q96M91 514 aa9.98□□□□□ -0.81
NFX1-203ENST00000379540 ABCA5Q8WWZ7 1642 aa9.98□□□□□ -0.81
NFX1-203ENST00000379540 EIF4G2P78344 907 aaKnown RBP eCLIP9.97□□□□□ -0.81
NFX1-203ENST00000379540 MRC2Q9UBG0 1479 aa9.97□□□□□ -0.81
NFX1-203ENST00000379540 GTF3C3Q9Y5Q9 886 aa9.96□□□□□ -0.82
NFX1-203ENST00000379540 TIAM1Q13009 1591 aa9.95□□□□□ -0.82
NFX1-203ENST00000379540 ERCC6Q03468 1493 aa9.95□□□□□ -0.82
NFX1-203ENST00000379540 RRBP1Q9P2E9 1410 aaKnown RBP9.95□□□□□ -0.82
NFX1-203ENST00000379540 CFDP1Q9UEE9 299 aaPredicted RBP9.95□□□□□ -0.82
NFX1-203ENST00000379540 FMN1Q68DA7 1419 aa9.94□□□□□ -0.82
NFX1-203ENST00000379540 TDRD9Q8NDG6 1382 aaKnown RBP9.94□□□□□ -0.82
NFX1-203ENST00000379540 CHMP4BQ9H444 224 aaKnown RBP9.94□□□□□ -0.82
NFX1-203ENST00000379540 CHIC2Q9UKJ5 165 aa9.94□□□□□ -0.82
NFX1-203ENST00000379540 FYCO1Q9BQS8 1478 aa9.93□□□□□ -0.82
NFX1-203ENST00000379540 KANK4Q5T7N3 995 aaPredicted RBP9.93□□□□□ -0.82
NFX1-203ENST00000379540 AQRO60306 1485 aaKnown RBP eCLIP9.93□□□□□ -0.822e-8■■■■■ 31.5
NFX1-203ENST00000379540 CCNB3Q8WWL7 1395 aa9.93□□□□□ -0.82
NFX1-203ENST00000379540 HNRNPUQ00839 825 aaKnown RBP eCLIP9.92□□□□□ -0.82
NFX1-203ENST00000379540 CFAP43Q8NDM7 1665 aa9.92□□□□□ -0.82
NFX1-203ENST00000379540 TARBP1Q13395 1621 aaKnown RBP9.91□□□□□ -0.82
NFX1-203ENST00000379540 C14orf37Q86TY3 774 aa9.91□□□□□ -0.82
NFX1-203ENST00000379540 CASKIN1Q8WXD9 1431 aa9.91□□□□□ -0.82
NFX1-203ENST00000379540 PNNQ9H307 717 aaKnown RBP9.91□□□□□ -0.82
NFX1-203ENST00000379540 LRRC9Q6ZRR7 1453 aa9.9□□□□□ -0.82
NFX1-203ENST00000379540 PCF11O94913 1555 aaKnown RBP9.9□□□□□ -0.82
NFX1-203ENST00000379540 FHOD3Q2V2M9 1422 aa9.9□□□□□ -0.82
NFX1-203ENST00000379540 KANK1Q14678 1352 aa9.9□□□□□ -0.82
NFX1-203ENST00000379540 ANP32EQ9BTT0 268 aa9.9□□□□□ -0.83
NFX1-203ENST00000379540 TIMELESSQ9UNS1 1208 aa9.9□□□□□ -0.83
NFX1-203ENST00000379540 IFT140Q96RY7 1462 aa9.9□□□□□ -0.83
NFX1-203ENST00000379540 KCNH8Q96L42 1107 aa9.89□□□□□ -0.83
NFX1-203ENST00000379540 MRS2Q9HD23 443 aa9.89□□□□□ -0.83
NFX1-203ENST00000379540 NUDCQ9Y266 331 aa9.89□□□□□ -0.83
NFX1-203ENST00000379540 ARID4BQ4LE39 1312 aaPredicted RBP9.88□□□□□ -0.83
NFX1-203ENST00000379540 DNAJC5BQ9UF47 199 aa9.88□□□□□ -0.83
NFX1-203ENST00000379540 GRIN2BQ13224 1484 aa9.88□□□□□ -0.83
NFX1-203ENST00000379540 PBRM1Q86U86 1689 aa9.88□□□□□ -0.83
NFX1-203ENST00000379540 MS4A1P11836 297 aa9.87□□□□□ -0.83
NFX1-203ENST00000379540 HAP1P54257 671 aaPredicted RBP9.87□□□□□ -0.83
NFX1-203ENST00000379540 DDX10Q13206 875 aaKnown RBP9.87□□□□□ -0.83
NFX1-203ENST00000379540 KDM2AQ9Y2K7 1162 aa9.87□□□□□ -0.83
NFX1-203ENST00000379540 PLPPR3Q6T4P5 718 aa9.87□□□□□ -0.83
NFX1-203ENST00000379540 WDR62O43379 1518 aa9.86□□□□□ -0.83
NFX1-203ENST00000379540 FAM9BQ8IZU0 186 aa9.86□□□□□ -0.83
NFX1-203ENST00000379540 CCDC136Q96JN2 1154 aa9.86□□□□□ -0.83
NFX1-203ENST00000379540 CARMIL2Q6F5E8 1435 aa9.86□□□□□ -0.83
NFX1-203ENST00000379540 SAMD9Q5K651 1589 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms