RNA–Protein interactions for RNA: ENST00000379540.7

NFX1-203, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFX1, Length 4,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-203ENST00000379540 NISCHQ9Y2I1 1504 aa14.3□□□□□ -0.12
NFX1-203ENST00000379540 DCAF8L2P0C7V8 631 aa12.84□□□□□ -0.35
NFX1-203ENST00000379540 CCDC180Q9P1Z9 1646 aa12.38□□□□□ -0.43
NFX1-203ENST00000379540 ZCCHC6Q5VYS8 1495 aaKnown RBP12.06□□□□□ -0.48
NFX1-203ENST00000379540 FAM9AQ8IZU1 332 aaPredicted RBP12.05□□□□□ -0.48
NFX1-203ENST00000379540 SUPT5HO00267 1087 aaKnown RBP12.03□□□□□ -0.48
NFX1-203ENST00000379540 SHROOM4Q9ULL8 1493 aa11.87□□□□□ -0.51
NFX1-203ENST00000379540 APLP2Q06481 763 aa11.87□□□□□ -0.51
NFX1-203ENST00000379540 DCAF1Q9Y4B6 1507 aa11.84□□□□□ -0.51
NFX1-203ENST00000379540 PELP1Q8IZL8 1130 aaKnown RBP11.82□□□□□ -0.52
NFX1-203ENST00000379540 MYO15BQ96JP2 1530 aa11.61□□□□□ -0.55
NFX1-203ENST00000379540 NACADO15069 1562 aa11.48□□□□□ -0.57
NFX1-203ENST00000379540 ABCC9O60706 1549 aa11.45□□□□□ -0.58
NFX1-203ENST00000379540 SCRIBQ14160 1630 aa11.4□□□□□ -0.58
NFX1-203ENST00000379540 ZEB1P37275 1124 aaPredicted RBP11.4□□□□□ -0.59
NFX1-203ENST00000379540 TRIM41Q8WV44 630 aa11.36□□□□□ -0.59
NFX1-203ENST00000379540 EHMT2Q96KQ7 1210 aa11.34□□□□□ -0.59
NFX1-203ENST00000379540 RB1CC1Q8TDY2 1594 aa11.33□□□□□ -0.6
NFX1-203ENST00000379540 CCER1Q8TC90 406 aaPredicted RBP11.29□□□□□ -0.6
NFX1-203ENST00000379540 UBTFP17480 764 aaKnown RBP11.23□□□□□ -0.61
NFX1-203ENST00000379540 CENPBP07199 599 aaPredicted RBP11.21□□□□□ -0.62
NFX1-203ENST00000379540 CHIC1Q5VXU3 224 aa11.2□□□□□ -0.62
NFX1-203ENST00000379540 ATP1B4Q9UN42 357 aaPredicted RBP11.19□□□□□ -0.62
NFX1-203ENST00000379540 RSF1Q96T23 1441 aaPredicted RBP11.19□□□□□ -0.62
NFX1-203ENST00000379540 PCGF6Q9BYE7 350 aa11.1□□□□□ -0.63
NFX1-203ENST00000379540 BAZ1AQ9NRL2 1556 aaPredicted RBP11.06□□□□□ -0.64
NFX1-203ENST00000379540 RANGAP1P46060 587 aaPredicted RBP11.05□□□□□ -0.64
NFX1-203ENST00000379540 CECR2Q9BXF3 1484 aa11.05□□□□□ -0.64
NFX1-203ENST00000379540 NEFLP07196 543 aa11.05□□□□□ -0.64
NFX1-203ENST00000379540 ERICH6Q7L0X2 663 aa11.04□□□□□ -0.64
NFX1-203ENST00000379540 MROH2BQ7Z745 1585 aa11.03□□□□□ -0.64
NFX1-203ENST00000379540 UNC13AQ9UPW8 1703 aa11□□□□□ -0.65
NFX1-203ENST00000379540 TTBK1Q5TCY1 1321 aaPredicted RBP10.99□□□□□ -0.65
NFX1-203ENST00000379540 WIZO95785 1651 aa10.95□□□□□ -0.66
NFX1-203ENST00000379540 MYT1LQ9UL68 1186 aa10.94□□□□□ -0.66
NFX1-203ENST00000379540 SMARCA4P51532 1647 aa10.94□□□□□ -0.66
NFX1-203ENST00000379540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.93□□□□□ -0.66
NFX1-203ENST00000379540 HNRNPUL2Q1KMD3 747 aaKnown RBP10.93□□□□□ -0.66
NFX1-203ENST00000379540 TOP2AP11388 1531 aaKnown RBP10.9□□□□□ -0.66
NFX1-203ENST00000379540 BICRAQ9NZM4 1560 aa10.87□□□□□ -0.67
NFX1-203ENST00000379540 TRIM26Q12899 539 aaPredicted RBP10.87□□□□□ -0.67
NFX1-203ENST00000379540 PABPN1Q86U42 306 aaKnown RBP eCLIP10.84□□□□□ -0.67
NFX1-203ENST00000379540 MYT1Q01538 1121 aa10.79□□□□□ -0.68
NFX1-203ENST00000379540 PEG3Q9GZU2 1588 aa10.78□□□□□ -0.68
NFX1-203ENST00000379540 SMARCA2P51531 1590 aa10.77□□□□□ -0.68
NFX1-203ENST00000379540 CCDC88BA6NC98 1476 aa10.76□□□□□ -0.69
NFX1-203ENST00000379540 LOC105371045A0A1W2PR82 267 aa10.75□□□□□ -0.69
NFX1-203ENST00000379540 EIF4G1Q04637 1599 aaKnown RBP10.74□□□□□ -0.69
NFX1-203ENST00000379540 DAXXQ9UER7 740 aaPredicted RBP10.74□□□□□ -0.69
NFX1-203ENST00000379540 BAZ1BQ9UIG0 1483 aaKnown RBP10.7□□□□□ -0.7
NFX1-203ENST00000379540 ATAD2BQ9ULI0 1458 aa10.69□□□□□ -0.7
NFX1-203ENST00000379540 ITGAEP38570 1179 aa10.66□□□□□ -0.7
NFX1-203ENST00000379540 EEA1Q15075 1411 aa10.63□□□□□ -0.71
NFX1-203ENST00000379540 YTHDC1Q96MU7 727 aaKnown RBP10.63□□□□□ -0.71
NFX1-203ENST00000379540 POLR3GLQ9BT43 218 aa10.62□□□□□ -0.71
NFX1-203ENST00000379540 ABCC8Q09428 1581 aa10.61□□□□□ -0.71
NFX1-203ENST00000379540 CDK11AQ9UQ88 783 aaPredicted RBP10.61□□□□□ -0.71
NFX1-203ENST00000379540 HMGXB3Q12766 1538 aa10.59□□□□□ -0.71
NFX1-203ENST00000379540 WRNQ14191 1432 aaPredicted RBP eCLIP10.58□□□□□ -0.72
NFX1-203ENST00000379540 NCAPD3P42695 1498 aa10.56□□□□□ -0.72
NFX1-203ENST00000379540 FAM50AQ14320 339 aaKnown RBP10.55□□□□□ -0.72
NFX1-203ENST00000379540 SLC4A1APQ9BWU0 796 aaKnown RBP10.55□□□□□ -0.72
NFX1-203ENST00000379540 TRIM52Q96A61 297 aa10.55□□□□□ -0.72
NFX1-203ENST00000379540 HRCP23327 699 aa10.54□□□□□ -0.72
NFX1-203ENST00000379540 PPARGC1BQ86YN6 1023 aaKnown RBP10.51□□□□□ -0.73
NFX1-203ENST00000379540 NEFMP07197 916 aa10.51□□□□□ -0.73
NFX1-203ENST00000379540 CSRNP3Q8WYN3 585 aa10.5□□□□□ -0.73
NFX1-203ENST00000379540 ZBTB47Q9UFB7 747 aaPredicted RBP10.49□□□□□ -0.73
NFX1-203ENST00000379540 FBLN2P98095 1184 aa10.48□□□□□ -0.73
NFX1-203ENST00000379540 ACIN1Q9UKV3 1341 aaKnown RBP10.47□□□□□ -0.73
NFX1-203ENST00000379540 SOGA1O94964 1423 aa10.47□□□□□ -0.73
NFX1-203ENST00000379540 NPM1P06748 294 aaKnown RBP eCLIP10.47□□□□□ -0.73
NFX1-203ENST00000379540 GOLGA3Q08378 1498 aa10.47□□□□□ -0.73
NFX1-203ENST00000379540 TNIKQ9UKE5 1360 aa10.46□□□□□ -0.73
NFX1-203ENST00000379540 ESF1Q9H501 851 aaKnown RBP10.46□□□□□ -0.74
NFX1-203ENST00000379540 SYNJ1O43426 1573 aa10.46□□□□□ -0.74
NFX1-203ENST00000379540 CLSPNQ9HAW4 1339 aa10.45□□□□□ -0.74
NFX1-203ENST00000379540 CEP164Q9UPV0 1460 aa10.44□□□□□ -0.74
NFX1-203ENST00000379540 TOP2BQ02880 1626 aa10.42□□□□□ -0.74
NFX1-203ENST00000379540 ZNF316A6NFI3 1004 aaPredicted RBP10.42□□□□□ -0.74
NFX1-203ENST00000379540 CEP162Q5TB80 1403 aa10.41□□□□□ -0.74
NFX1-203ENST00000379540 ANP32CO43423 234 aa10.41□□□□□ -0.74
NFX1-203ENST00000379540 KIF21BO75037 1637 aa10.41□□□□□ -0.74
NFX1-203ENST00000379540 BIVM-ERCC5R4GMW8 1640 aa10.4□□□□□ -0.74
NFX1-203ENST00000379540 CFTRP13569 1480 aa10.4□□□□□ -0.74
NFX1-203ENST00000379540 RUSC2Q8N2Y8 1516 aa10.38□□□□□ -0.75
NFX1-203ENST00000379540 PRDM2Q13029 1718 aa10.37□□□□□ -0.75
NFX1-203ENST00000379540 RTL5Q5HYW3 569 aaPredicted RBP10.37□□□□□ -0.75
NFX1-203ENST00000379540 CC2D2AQ9P2K1 1620 aa10.35□□□□□ -0.75
NFX1-203ENST00000379540 DIEXFQ68CQ4 756 aaKnown RBP10.35□□□□□ -0.75
NFX1-203ENST00000379540 BCANQ96GW7 911 aa10.34□□□□□ -0.75
NFX1-203ENST00000379540 CADPSQ9ULU8 1353 aa10.33□□□□□ -0.76
NFX1-203ENST00000379540 KIF27Q86VH2 1401 aa10.32□□□□□ -0.76
NFX1-203ENST00000379540 NEUROD1Q13562 356 aa10.31□□□□□ -0.76
NFX1-203ENST00000379540 CUX1P39880 1505 aa10.31□□□□□ -0.76
NFX1-203ENST00000379540 ERICH3Q5RHP9 1530 aa10.3□□□□□ -0.76
NFX1-203ENST00000379540 CLIP1P30622 1438 aa10.3□□□□□ -0.76
NFX1-203ENST00000379540 ZNF326Q5BKZ1 582 aaKnown RBP10.29□□□□□ -0.76
NFX1-203ENST00000379540 STAG3Q9UJ98 1225 aa10.28□□□□□ -0.76
NFX1-203ENST00000379540 CNGB1Q14028 1251 aaPredicted RBP10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms