RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 ZEB1P37275 1124 aaPredicted RBP22.97■■□□□ 1.27
SNX2-201ENST00000379516 KANK4Q5T7N3 995 aaPredicted RBP22.97■■□□□ 1.27
SNX2-201ENST00000379516 ZNF608Q9ULD9 1512 aaPredicted RBP22.96■■□□□ 1.27
SNX2-201ENST00000379516 GRIN2BQ13224 1484 aa22.96■■□□□ 1.27
SNX2-201ENST00000379516 THOC2Q8NI27 1593 aaKnown RBP22.95■■□□□ 1.26
SNX2-201ENST00000379516 FHAD1B1AJZ9 1412 aa22.94■■□□□ 1.26
SNX2-201ENST00000379516 EFCAB5A4FU69 1503 aa22.93■■□□□ 1.26
SNX2-201ENST00000379516 FHOD3Q2V2M9 1422 aa22.91■■□□□ 1.26
SNX2-201ENST00000379516 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.9■■□□□ 1.26
SNX2-201ENST00000379516 ADAMTS12P58397 1594 aa22.89■■□□□ 1.25
SNX2-201ENST00000379516 CCER1Q8TC90 406 aaPredicted RBP22.84■■□□□ 1.25
SNX2-201ENST00000379516 HNRNPUL2Q1KMD3 747 aaKnown RBP22.84■■□□□ 1.25
SNX2-201ENST00000379516 MAP3K1Q13233 1512 aa22.82■■□□□ 1.24
SNX2-201ENST00000379516 ATP1B4Q9UN42 357 aaPredicted RBP22.82■■□□□ 1.24
SNX2-201ENST00000379516 EIF4G3O43432 1585 aaKnown RBP22.82■■□□□ 1.24
SNX2-201ENST00000379516 TIAM1Q13009 1591 aa22.82■■□□□ 1.24
SNX2-201ENST00000379516 PCF11O94913 1555 aaKnown RBP22.81■■□□□ 1.24
SNX2-201ENST00000379516 SNAPC4Q5SXM2 1469 aa22.79■■□□□ 1.24
SNX2-201ENST00000379516 SAMD9Q5K651 1589 aa22.79■■□□□ 1.24
SNX2-201ENST00000379516 FMN1Q68DA7 1419 aa22.78■■□□□ 1.24
SNX2-201ENST00000379516 CASKIN1Q8WXD9 1431 aa22.77■■□□□ 1.24
SNX2-201ENST00000379516 FYCO1Q9BQS8 1478 aa22.76■■□□□ 1.23
SNX2-201ENST00000379516 LRRC9Q6ZRR7 1453 aa22.74■■□□□ 1.23
SNX2-201ENST00000379516 IQGAP2Q13576 1575 aa22.73■■□□□ 1.23
SNX2-201ENST00000379516 RRBP1Q9P2E9 1410 aaKnown RBP22.71■■□□□ 1.23
SNX2-201ENST00000379516 CFAP43Q8NDM7 1665 aa22.69■■□□□ 1.22
SNX2-201ENST00000379516 MAGI1Q96QZ7 1491 aaPredicted RBP22.69■■□□□ 1.22
SNX2-201ENST00000379516 GRIN2AQ12879 1464 aa22.69■■□□□ 1.22
SNX2-201ENST00000379516 CHMP7Q8WUX9 453 aaPredicted RBP22.66■■□□□ 1.22
SNX2-201ENST00000379516 CCNB3Q8WWL7 1395 aa22.66■■□□□ 1.22
SNX2-201ENST00000379516 KIAA0586Q9BVV6 1533 aa22.64■■□□□ 1.21
SNX2-201ENST00000379516 SYNJ2O15056 1496 aa22.63■■□□□ 1.21
SNX2-201ENST00000379516 FBLN2P98095 1184 aa22.62■■□□□ 1.21
SNX2-201ENST00000379516 UGGT2Q9NYU1 1516 aa22.61■■□□□ 1.21
SNX2-201ENST00000379516 PHLDB1Q86UU1 1377 aa22.59■■□□□ 1.21
SNX2-201ENST00000379516 MTUS2Q5JR59 1369 aa22.53■■□□□ 1.2
SNX2-201ENST00000379516 CEP170Q5SW79 1584 aa22.53■■□□□ 1.2
SNX2-201ENST00000379516 ITGAEP38570 1179 aa22.52■■□□□ 1.2
SNX2-201ENST00000379516 DISP1Q96F81 1524 aa22.51■■□□□ 1.19
SNX2-201ENST00000379516 LRRIQ1Q96JM4 1722 aa22.51■■□□□ 1.19
SNX2-201ENST00000379516 KIAA0556O60303 1618 aa22.49■■□□□ 1.19
SNX2-201ENST00000379516 NUP160Q12769 1436 aa22.48■■□□□ 1.19
SNX2-201ENST00000379516 HECW1Q76N89 1606 aa22.47■■□□□ 1.19
SNX2-201ENST00000379516 FAM50AQ14320 339 aaKnown RBP22.47■■□□□ 1.19
SNX2-201ENST00000379516 CCDC18Q5T9S5 1454 aa22.47■■□□□ 1.19
SNX2-201ENST00000379516 EPRSP07814 1512 aaKnown RBP22.42■■□□□ 1.18
SNX2-201ENST00000379516 JPH4Q96JJ6 628 aa22.42■■□□□ 1.18
SNX2-201ENST00000379516 EHBP1L1Q8N3D4 1523 aa22.41■■□□□ 1.18
SNX2-201ENST00000379516 ARID3CA6NKF2 412 aa22.39■■□□□ 1.18
SNX2-201ENST00000379516 NCOA2Q15596 1464 aa22.38■■□□□ 1.17
SNX2-201ENST00000379516 CDK13Q14004 1512 aaKnown RBP22.37■■□□□ 1.17
SNX2-201ENST00000379516 MAGI3Q5TCQ9 1506 aa22.37■■□□□ 1.17
SNX2-201ENST00000379516 CARMIL2Q6F5E8 1435 aa22.37■■□□□ 1.17
SNX2-201ENST00000379516 FGD6Q6ZV73 1430 aa22.37■■□□□ 1.17
SNX2-201ENST00000379516 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.36■■□□□ 1.17
SNX2-201ENST00000379516 SUPT6HQ7KZ85 1726 aaKnown RBP22.36■■□□□ 1.17
SNX2-201ENST00000379516 DHX57Q6P158 1386 aaKnown RBP22.34■■□□□ 1.17
SNX2-201ENST00000379516 MYOM3Q5VTT5 1437 aa22.33■■□□□ 1.16
SNX2-201ENST00000379516 RAPGEF6Q8TEU7 1601 aa22.32■■□□□ 1.16
SNX2-201ENST00000379516 NUP153P49790 1475 aaKnown RBP22.31■■□□□ 1.16
SNX2-201ENST00000379516 RAB3GAP2Q9H2M9 1393 aa22.3■■□□□ 1.16
SNX2-201ENST00000379516 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
SNX2-201ENST00000379516 SETD5Q9C0A6 1442 aa22.28■■□□□ 1.16
SNX2-201ENST00000379516 CLSPNQ9HAW4 1339 aa22.28■■□□□ 1.16
SNX2-201ENST00000379516 PLB1Q6P1J6 1458 aa22.26■■□□□ 1.15
SNX2-201ENST00000379516 CHD1O14646 1710 aa22.25■■□□□ 1.15
SNX2-201ENST00000379516 CDK11AQ9UQ88 783 aaPredicted RBP22.24■■□□□ 1.15
SNX2-201ENST00000379516 PRG4Q92954 1404 aaPredicted RBP22.21■■□□□ 1.15
SNX2-201ENST00000379516 PTPN23Q9H3S7 1636 aa22.2■■□□□ 1.14
SNX2-201ENST00000379516 PTPRKQ15262 1439 aa22.16■■□□□ 1.14
SNX2-201ENST00000379516 MIA2Q96PC5 1412 aa22.15■■□□□ 1.14
SNX2-201ENST00000379516 TCOF1Q13428 1488 aaKnown RBP22.15■■□□□ 1.14
SNX2-201ENST00000379516 ABCA8O94911 1581 aa22.13■■□□□ 1.13
SNX2-201ENST00000379516 PTPRGP23470 1445 aa22.13■■□□□ 1.13
SNX2-201ENST00000379516 TROQ12816 1431 aaPredicted RBP22.12■■□□□ 1.13
SNX2-201ENST00000379516 HFM1A2PYH4 1435 aa22.09■■□□□ 1.13
SNX2-201ENST00000379516 SHROOM2Q13796 1616 aa22.07■■□□□ 1.12
SNX2-201ENST00000379516 ATP10BO94823 1461 aa22.06■■□□□ 1.12
SNX2-201ENST00000379516 MAPKBP1O60336 1514 aa22.05■■□□□ 1.12
SNX2-201ENST00000379516 PLEKHD1A6NEE1 506 aa22.05■■□□□ 1.12
SNX2-201ENST00000379516 CHIC2Q9UKJ5 165 aa22.04■■□□□ 1.12
SNX2-201ENST00000379516 NAIPQ13075 1403 aa22.04■■□□□ 1.12
SNX2-201ENST00000379516 ZNF316A6NFI3 1004 aaPredicted RBP22.03■■□□□ 1.12
SNX2-201ENST00000379516 KIF14Q15058 1648 aa22■■□□□ 1.11
SNX2-201ENST00000379516 ZNF644Q9H582 1327 aaPredicted RBP22■■□□□ 1.11
SNX2-201ENST00000379516 RRP7BPQ9NSQ0 103 aa22■■□□□ 1.11
SNX2-201ENST00000379516 ADCY10Q96PN6 1610 aa21.99■■□□□ 1.11
SNX2-201ENST00000379516 CFDP1Q9UEE9 299 aaPredicted RBP21.99■■□□□ 1.11
SNX2-201ENST00000379516 UACAQ9BZF9 1416 aa21.99■■□□□ 1.11
SNX2-201ENST00000379516 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
SNX2-201ENST00000379516 CLASP1Q7Z460 1538 aa21.98■■□□□ 1.11
SNX2-201ENST00000379516 GPATCH8Q9UKJ3 1502 aaKnown RBP21.97■■□□□ 1.11
SNX2-201ENST00000379516 DAPK1P53355 1430 aa21.95■■□□□ 1.1
SNX2-201ENST00000379516 ITSN2Q9NZM3 1697 aa21.94■■□□□ 1.1
SNX2-201ENST00000379516 DIEXFQ68CQ4 756 aaKnown RBP21.94■■□□□ 1.1
SNX2-201ENST00000379516 AKNAQ7Z591 1439 aa21.94■■□□□ 1.1
SNX2-201ENST00000379516 ABCC5O15440 1437 aa21.92■■□□□ 1.1
SNX2-201ENST00000379516 ZNF777Q9ULD5 760 aaPredicted RBP21.92■■□□□ 1.1
SNX2-201ENST00000379516 SIN3AQ96ST3 1273 aa21.92■■□□□ 1.1
SNX2-201ENST00000379516 CAMSAP2Q08AD1 1489 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms