RNA–Protein interactions for RNA: ENST00000378540.8

PPM1B-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 2

Gene PPM1B, Length 1,703 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-203ENST00000378540 CTTNBP2Q8WZ74 1663 aa36.81■■■■□ 3.48
PPM1B-203ENST00000378540 GRIN2AQ12879 1464 aa36.78■■■■□ 3.48
PPM1B-203ENST00000378540 ARHGAP35Q9NRY4 1499 aa36.64■■■■□ 3.46
PPM1B-203ENST00000378540 ARAP1Q96P48 1450 aa36.58■■■■□ 3.45
PPM1B-203ENST00000378540 IQGAP2Q13576 1575 aa36.57■■■■□ 3.44
PPM1B-203ENST00000378540 P3H3Q8IVL6 736 aa36.56■■■■□ 3.44
PPM1B-203ENST00000378540 CEP170Q5SW79 1584 aa36.56■■■■□ 3.44
PPM1B-203ENST00000378540 CHD1O14646 1710 aa36.55■■■■□ 3.44
PPM1B-203ENST00000378540 KIAA0586Q9BVV6 1533 aa36.55■■■■□ 3.44
PPM1B-203ENST00000378540 NUP160Q12769 1436 aa36.51■■■■□ 3.44
PPM1B-203ENST00000378540 VPS8Q8N3P4 1428 aa36.51■■■■□ 3.44
PPM1B-203ENST00000378540 EFCAB5A4FU69 1503 aa36.48■■■■□ 3.43
PPM1B-203ENST00000378540 FHOD3Q2V2M9 1422 aa36.42■■■■□ 3.42
PPM1B-203ENST00000378540 SAMD9Q5K651 1589 aa36.4■■■■□ 3.42
PPM1B-203ENST00000378540 UGGT2Q9NYU1 1516 aa36.37■■■■□ 3.41
PPM1B-203ENST00000378540 PPARGC1BQ86YN6 1023 aaKnown RBP36.34■■■■□ 3.41
PPM1B-203ENST00000378540 JPH4Q96JJ6 628 aa36.31■■■■□ 3.4
PPM1B-203ENST00000378540 APLP2Q06481 763 aa36.25■■■■□ 3.39
PPM1B-203ENST00000378540 DISP1Q96F81 1524 aa36.22■■■■□ 3.39
PPM1B-203ENST00000378540 FMN1Q68DA7 1419 aa36.19■■■■□ 3.38
PPM1B-203ENST00000378540 KIAA0556O60303 1618 aa36.19■■■■□ 3.38
PPM1B-203ENST00000378540 ATP1B4Q9UN42 357 aaPredicted RBP36.17■■■■□ 3.38
PPM1B-203ENST00000378540 TTBK1Q5TCY1 1321 aaPredicted RBP36.15■■■■□ 3.38
PPM1B-203ENST00000378540 CARMIL2Q6F5E8 1435 aa36.14■■■■□ 3.38
PPM1B-203ENST00000378540 PCF11O94913 1555 aaKnown RBP36.12■■■■□ 3.37
PPM1B-203ENST00000378540 CLASP1Q7Z460 1538 aa36.09■■■■□ 3.37
PPM1B-203ENST00000378540 PRG4Q92954 1404 aaPredicted RBP36.09■■■■□ 3.37
PPM1B-203ENST00000378540 CASKIN1Q8WXD9 1431 aa36.08■■■■□ 3.37
PPM1B-203ENST00000378540 FYCO1Q9BQS8 1478 aa36.04■■■■□ 3.36
PPM1B-203ENST00000378540 SHROOM2Q13796 1616 aa36.04■■■■□ 3.36
PPM1B-203ENST00000378540 OSCARQ8IYS5 282 aa36.02■■■■□ 3.36
PPM1B-203ENST00000378540 TRIM26Q12899 539 aaPredicted RBP35.94■■■■□ 3.34
PPM1B-203ENST00000378540 KANK4Q5T7N3 995 aaPredicted RBP35.94■■■■□ 3.34
PPM1B-203ENST00000378540 TIAM1Q13009 1591 aa35.91■■■■□ 3.34
PPM1B-203ENST00000378540 ERCC6L2Q5T890 1561 aa35.88■■■■□ 3.33
PPM1B-203ENST00000378540 MAP3K1Q13233 1512 aa35.88■■■■□ 3.33
PPM1B-203ENST00000378540 PCGF6Q9BYE7 350 aa35.88■■■■□ 3.33
PPM1B-203ENST00000378540 HECW1Q76N89 1606 aa35.85■■■■□ 3.33
PPM1B-203ENST00000378540 PTPRGP23470 1445 aa35.84■■■■□ 3.33
PPM1B-203ENST00000378540 CFAP43Q8NDM7 1665 aa35.83■■■■□ 3.33
PPM1B-203ENST00000378540 RAPGEF6Q8TEU7 1601 aa35.82■■■■□ 3.32
PPM1B-203ENST00000378540 LRRIQ1Q96JM4 1722 aa35.82■■■■□ 3.32
PPM1B-203ENST00000378540 ARID3CA6NKF2 412 aa35.8■■■■□ 3.32
PPM1B-203ENST00000378540 PLB1Q6P1J6 1458 aa35.8■■■■□ 3.32
PPM1B-203ENST00000378540 LRRC9Q6ZRR7 1453 aa35.75■■■■□ 3.31
PPM1B-203ENST00000378540 CCDC18Q5T9S5 1454 aa35.74■■■■□ 3.31
PPM1B-203ENST00000378540 EPRSP07814 1512 aaKnown RBP35.73■■■■□ 3.31
PPM1B-203ENST00000378540 NUP153P49790 1475 aaKnown RBP35.72■■■■□ 3.31
PPM1B-203ENST00000378540 ABCA8O94911 1581 aa35.69■■■■□ 3.3
PPM1B-203ENST00000378540 CDK13Q14004 1512 aaKnown RBP35.69■■■■□ 3.3
PPM1B-203ENST00000378540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.66■■■■□ 3.3
PPM1B-203ENST00000378540 HNRNPUL2Q1KMD3 747 aaKnown RBP35.66■■■■□ 3.3
PPM1B-203ENST00000378540 MTUS2Q5JR59 1369 aa35.64■■■■□ 3.3
PPM1B-203ENST00000378540 UACAQ9BZF9 1416 aa35.6■■■■□ 3.29
PPM1B-203ENST00000378540 MAGI3Q5TCQ9 1506 aa35.54■■■■□ 3.28
PPM1B-203ENST00000378540 EHBP1L1Q8N3D4 1523 aa35.51■■■■□ 3.28
PPM1B-203ENST00000378540 CDK11AQ9UQ88 783 aaPredicted RBP35.51■■■■□ 3.27
PPM1B-203ENST00000378540 ATP10BO94823 1461 aa35.49■■■■□ 3.27
PPM1B-203ENST00000378540 ABCC2Q92887 1545 aa35.47■■■■□ 3.27
PPM1B-203ENST00000378540 PHLDB1Q86UU1 1377 aa35.43■■■■□ 3.26
PPM1B-203ENST00000378540 SUPT6HQ7KZ85 1726 aaKnown RBP35.42■■■■□ 3.26
PPM1B-203ENST00000378540 NCOA2Q15596 1464 aa35.4■■■■□ 3.26
PPM1B-203ENST00000378540 UHRF1BP1LA0JNW5 1464 aa35.38■■■■□ 3.25
PPM1B-203ENST00000378540 PLEKHD1A6NEE1 506 aa35.37■■■■□ 3.25
PPM1B-203ENST00000378540 ARHGEF11O15085 1522 aa35.35■■■■□ 3.25
PPM1B-203ENST00000378540 TROQ12816 1431 aaPredicted RBP35.34■■■■□ 3.25
PPM1B-203ENST00000378540 RRBP1Q9P2E9 1410 aaKnown RBP35.33■■■■□ 3.25
PPM1B-203ENST00000378540 CCNB3Q8WWL7 1395 aa35.3■■■■□ 3.24
PPM1B-203ENST00000378540 ADCY10Q96PN6 1610 aa35.29■■■■□ 3.24
PPM1B-203ENST00000378540 KDM5BQ9UGL1 1544 aa35.25■■■■□ 3.23
PPM1B-203ENST00000378540 ZCCHC11Q5TAX3 1644 aaKnown RBP35.25■■■■□ 3.23
PPM1B-203ENST00000378540 MYOM3Q5VTT5 1437 aa35.22■■■■□ 3.23
PPM1B-203ENST00000378540 RIMBP3CA6NJZ7 1639 aa35.21■■■■□ 3.23
PPM1B-203ENST00000378540 RIMBP3BA6NNM3 1639 aa35.21■■■■□ 3.23
PPM1B-203ENST00000378540 RIMBP3Q9UFD9 1639 aa35.21■■■■□ 3.23
PPM1B-203ENST00000378540 FAM50AQ14320 339 aaKnown RBP35.2■■■■□ 3.23
PPM1B-203ENST00000378540 KIF14Q15058 1648 aa35.19■■■■□ 3.22
PPM1B-203ENST00000378540 FGD6Q6ZV73 1430 aa35.19■■■■□ 3.22
PPM1B-203ENST00000378540 CYB5RLQ6IPT4 315 aa35.14■■■■□ 3.22
PPM1B-203ENST00000378540 ITGAEP38570 1179 aa35.12■■■■□ 3.21
PPM1B-203ENST00000378540 NPM1P06748 294 aaKnown RBP eCLIP35.11■■■■□ 3.21
PPM1B-203ENST00000378540 KCNH8Q96L42 1107 aa35.09■■■■□ 3.21
PPM1B-203ENST00000378540 PTPN23Q9H3S7 1636 aa35.04■■■■□ 3.2
PPM1B-203ENST00000378540 ABCC10Q5T3U5 1492 aa35.04■■■■□ 3.2
PPM1B-203ENST00000378540 MIA2Q96PC5 1412 aa35.03■■■■□ 3.2
PPM1B-203ENST00000378540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.02■■■■□ 3.2
PPM1B-203ENST00000378540 GPATCH8Q9UKJ3 1502 aaKnown RBP35.01■■■■□ 3.2
PPM1B-203ENST00000378540 CFDP1Q9UEE9 299 aaPredicted RBP34.98■■■■□ 3.19
PPM1B-203ENST00000378540 ITSN2Q9NZM3 1697 aa34.97■■■■□ 3.19
PPM1B-203ENST00000378540 WDR7Q9Y4E6 1490 aa34.95■■■■□ 3.19
PPM1B-203ENST00000378540 ASXL2Q76L83 1435 aa34.95■■■■□ 3.19
PPM1B-203ENST00000378540 TCOF1Q13428 1488 aaKnown RBP34.95■■■■□ 3.19
PPM1B-203ENST00000378540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.93■■■■□ 3.183e-7■□□□□ 11.1
PPM1B-203ENST00000378540 CDC42BPAQ5VT25 1732 aa34.93■■■■□ 3.18
PPM1B-203ENST00000378540 ZNF777Q9ULD5 760 aaPredicted RBP34.92■■■■□ 3.18
PPM1B-203ENST00000378540 ZNF644Q9H582 1327 aaPredicted RBP34.91■■■■□ 3.18
PPM1B-203ENST00000378540 TTC37Q6PGP7 1564 aa34.91■■■■□ 3.18
PPM1B-203ENST00000378540 CAMSAP2Q08AD1 1489 aa34.82■■■■□ 3.16
PPM1B-203ENST00000378540 PREX2Q70Z35 1606 aa34.81■■■■□ 3.16
PPM1B-203ENST00000378540 CDC42BPBQ9Y5S2 1711 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms