RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 PRG4Q92954 1404 aaPredicted RBP29.25■■■□□ 2.27
RER1-202ENST00000378512 JPH4Q96JJ6 628 aa29.22■■■□□ 2.27
RER1-202ENST00000378512 KIAA0586Q9BVV6 1533 aa29.06■■■□□ 2.24
RER1-202ENST00000378512 CARMIL1Q5VZK9 1371 aa29.05■■■□□ 2.24
RER1-202ENST00000378512 ADCY10Q96PN6 1610 aa28.94■■■□□ 2.22
RER1-202ENST00000378512 KIF13AQ9H1H9 1805 aa28.94■■■□□ 2.22
RER1-202ENST00000378512 RAPGEF2Q9Y4G8 1499 aa28.89■■■□□ 2.22
RER1-202ENST00000378512 TTBK1Q5TCY1 1321 aaPredicted RBP28.84■■■□□ 2.21
RER1-202ENST00000378512 IQGAP2Q13576 1575 aa28.83■■■□□ 2.21
RER1-202ENST00000378512 PRXQ9BXM0 1461 aa28.8■■■□□ 2.2
RER1-202ENST00000378512 MAPKBP1O60336 1514 aa28.8■■■□□ 2.2
RER1-202ENST00000378512 NPM1P06748 294 aaKnown RBP eCLIP28.79■■■□□ 2.2
RER1-202ENST00000378512 PTPRGP23470 1445 aa28.78■■■□□ 2.2
RER1-202ENST00000378512 ABCC10Q5T3U5 1492 aa28.78■■■□□ 2.2
RER1-202ENST00000378512 FAM69CQ0P6D2 419 aa28.77■■■□□ 2.2
RER1-202ENST00000378512 DIP2BQ9P265 1576 aa28.75■■■□□ 2.19
RER1-202ENST00000378512 TNIKQ9UKE5 1360 aa28.73■■■□□ 2.19
RER1-202ENST00000378512 DISP1Q96F81 1524 aa28.73■■■□□ 2.19
RER1-202ENST00000378512 CARMIL2Q6F5E8 1435 aa28.72■■■□□ 2.19
RER1-202ENST00000378512 CTTNBP2Q8WZ74 1663 aa28.71■■■□□ 2.19
RER1-202ENST00000378512 EEA1Q15075 1411 aa28.7■■■□□ 2.18
RER1-202ENST00000378512 UGGT2Q9NYU1 1516 aa28.67■■■□□ 2.18
RER1-202ENST00000378512 CHIC1Q5VXU3 224 aa28.65■■■□□ 2.18
RER1-202ENST00000378512 CSRNP3Q8WYN3 585 aa28.63■■■□□ 2.17
RER1-202ENST00000378512 ABCC2Q92887 1545 aa28.62■■■□□ 2.17
RER1-202ENST00000378512 KIAA0556O60303 1618 aa28.59■■■□□ 2.17
RER1-202ENST00000378512 TSPOAP1O95153 1857 aa28.57■■■□□ 2.16
RER1-202ENST00000378512 UACAQ9BZF9 1416 aa28.56■■■□□ 2.16
RER1-202ENST00000378512 UHRF1BP1LA0JNW5 1464 aa28.56■■■□□ 2.16
RER1-202ENST00000378512 ASXL2Q76L83 1435 aa28.54■■■□□ 2.16
RER1-202ENST00000378512 AEBP2Q6ZN18 517 aaPredicted RBP28.52■■■□□ 2.16
RER1-202ENST00000378512 KIF21BO75037 1637 aa28.47■■■□□ 2.15
RER1-202ENST00000378512 KDM5BQ9UGL1 1544 aa28.46■■■□□ 2.15
RER1-202ENST00000378512 PLB1Q6P1J6 1458 aa28.45■■■□□ 2.15
RER1-202ENST00000378512 KDM6BO15054 1643 aa28.45■■■□□ 2.14
RER1-202ENST00000378512 ZCCHC11Q5TAX3 1644 aaKnown RBP28.44■■■□□ 2.14
RER1-202ENST00000378512 GOLGA3Q08378 1498 aa28.43■■■□□ 2.14
RER1-202ENST00000378512 PPRC1Q5VV67 1664 aaKnown RBP28.41■■■□□ 2.14
RER1-202ENST00000378512 GLI2P10070 1586 aa28.4■■■□□ 2.14
RER1-202ENST00000378512 EPRSP07814 1512 aaKnown RBP28.36■■■□□ 2.13
RER1-202ENST00000378512 FAM9AQ8IZU1 332 aaPredicted RBP28.35■■■□□ 2.13
RER1-202ENST00000378512 SAMD9Q5K651 1589 aa28.34■■■□□ 2.13
RER1-202ENST00000378512 ABCA8O94911 1581 aa28.32■■■□□ 2.12
RER1-202ENST00000378512 MAP3K4Q9Y6R4 1608 aa28.29■■■□□ 2.12
RER1-202ENST00000378512 P3H3Q8IVL6 736 aa28.27■■■□□ 2.12
RER1-202ENST00000378512 WDR7Q9Y4E6 1490 aa28.26■■■□□ 2.11
RER1-202ENST00000378512 COL17A1Q9UMD9 1497 aaPredicted RBP28.23■■■□□ 2.11
RER1-202ENST00000378512 ARID3CA6NKF2 412 aa28.18■■■□□ 2.1
RER1-202ENST00000378512 KDM4FA0A1W2PPD8 638 aa28.17■■■□□ 2.1
RER1-202ENST00000378512 KCNH8Q96L42 1107 aa28.15■■■□□ 2.1
RER1-202ENST00000378512 EFCAB5A4FU69 1503 aa28.13■■■□□ 2.09
RER1-202ENST00000378512 RANGAP1P46060 587 aaPredicted RBP28.12■■■□□ 2.09
RER1-202ENST00000378512 TEX14Q8IWB6 1497 aa28.11■■■□□ 2.09
RER1-202ENST00000378512 ATP10BO94823 1461 aa28.09■■■□□ 2.09
RER1-202ENST00000378512 CD109Q6YHK3 1445 aa28.07■■■□□ 2.08
RER1-202ENST00000378512 CFAP43Q8NDM7 1665 aa28.06■■■□□ 2.08
RER1-202ENST00000378512 RAPGEF6Q8TEU7 1601 aa28.05■■■□□ 2.08
RER1-202ENST00000378512 FHOD3Q2V2M9 1422 aa28.04■■■□□ 2.08
RER1-202ENST00000378512 MAGI3Q5TCQ9 1506 aa28.02■■■□□ 2.08
RER1-202ENST00000378512 UBTFP17480 764 aaKnown RBP28.01■■■□□ 2.08
RER1-202ENST00000378512 EHMT2Q96KQ7 1210 aa27.97■■■□□ 2.07
RER1-202ENST00000378512 NUP153P49790 1475 aaKnown RBP27.96■■■□□ 2.07
RER1-202ENST00000378512 ADGRL1O94910 1474 aa27.95■■■□□ 2.07
RER1-202ENST00000378512 ARHGAP35Q9NRY4 1499 aa27.95■■■□□ 2.07
RER1-202ENST00000378512 ABCA9Q8IUA7 1624 aa27.89■■■□□ 2.06
RER1-202ENST00000378512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.89■■■□□ 2.06
RER1-202ENST00000378512 HNRNPUL2Q1KMD3 747 aaKnown RBP27.89■■■□□ 2.06
RER1-202ENST00000378512 FMN1Q68DA7 1419 aa27.83■■■□□ 2.05
RER1-202ENST00000378512 ARAP3Q8WWN8 1544 aa27.8■■■□□ 2.04
RER1-202ENST00000378512 HECW1Q76N89 1606 aa27.74■■■□□ 2.03
RER1-202ENST00000378512 CDK13Q14004 1512 aaKnown RBP27.74■■■□□ 2.03
RER1-202ENST00000378512 RAPGEF3O95398 923 aa27.72■■■□□ 2.03
RER1-202ENST00000378512 PLEKHD1A6NEE1 506 aa27.7■■■□□ 2.03
RER1-202ENST00000378512 NEO1Q92859 1461 aa27.7■■■□□ 2.02
RER1-202ENST00000378512 LRRIQ1Q96JM4 1722 aa27.69■■■□□ 2.02
RER1-202ENST00000378512 FRMPD1Q5SYB0 1578 aa27.68■■■□□ 2.02
RER1-202ENST00000378512 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.67■■■□□ 2.024e-13■■■□□ 16.9
RER1-202ENST00000378512 TTC37Q6PGP7 1564 aa27.66■■■□□ 2.02
RER1-202ENST00000378512 PHLDB1Q86UU1 1377 aa27.66■■■□□ 2.02
RER1-202ENST00000378512 CLIP1P30622 1438 aa27.66■■■□□ 2.02
RER1-202ENST00000378512 CASKIN1Q8WXD9 1431 aa27.62■■■□□ 2.01
RER1-202ENST00000378512 PCF11O94913 1555 aaKnown RBP27.62■■■□□ 2.01
RER1-202ENST00000378512 ATP1B4Q9UN42 357 aaPredicted RBP27.61■■■□□ 2.01
RER1-202ENST00000378512 FANCAO15360 1455 aa27.57■■■□□ 2
RER1-202ENST00000378512 AKNAQ7Z591 1439 aa27.56■■■□□ 2
RER1-202ENST00000378512 FYCO1Q9BQS8 1478 aa27.55■■■□□ 2
RER1-202ENST00000378512 HECW2Q9P2P5 1572 aa27.54■■■□□ 2
RER1-202ENST00000378512 RICTORQ6R327 1708 aa27.54■■■□□ 2
RER1-202ENST00000378512 DENND4BO75064 1496 aaPredicted RBP27.52■■■□□ 2
RER1-202ENST00000378512 CCDC18Q5T9S5 1454 aa27.52■■■□□ 2
RER1-202ENST00000378512 CEP162Q5TB80 1403 aa27.51■■□□□ 1.99
RER1-202ENST00000378512 CFAP74Q9C0B2 1584 aa27.5■■□□□ 1.99
RER1-202ENST00000378512 KIF14Q15058 1648 aa27.48■■□□□ 1.99
RER1-202ENST00000378512 TROQ12816 1431 aaPredicted RBP27.48■■□□□ 1.99
RER1-202ENST00000378512 ADAMTSL3P82987 1691 aa27.47■■□□□ 1.99
RER1-202ENST00000378512 ARHGEF40Q8TER5 1519 aa27.47■■□□□ 1.99
RER1-202ENST00000378512 CDK11AQ9UQ88 783 aaPredicted RBP27.47■■□□□ 1.99
RER1-202ENST00000378512 PLCH2O75038 1416 aa27.45■■□□□ 1.99
RER1-202ENST00000378512 BCORL1Q5H9F3 1711 aa27.43■■□□□ 1.98
RER1-202ENST00000378512 ARID4BQ4LE39 1312 aaPredicted RBP27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms