RNA–Protein interactions for RNA: ENST00000377768.7

SNX5-202, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-202ENST00000377768 ABCA5Q8WWZ7 1642 aa23.52■■□□□ 1.36
SNX5-202ENST00000377768 MRC2Q9UBG0 1479 aa23.5■■□□□ 1.35
SNX5-202ENST00000377768 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
SNX5-202ENST00000377768 TARBP1Q13395 1621 aaKnown RBP23.48■■□□□ 1.35
SNX5-202ENST00000377768 CTTNBP2Q8WZ74 1663 aa23.37■■□□□ 1.33
SNX5-202ENST00000377768 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
SNX5-202ENST00000377768 P3H3Q8IVL6 736 aa23.34■■□□□ 1.33
SNX5-202ENST00000377768 ERCC6Q03468 1493 aa23.34■■□□□ 1.33
SNX5-202ENST00000377768 WDR62O43379 1518 aa23.34■■□□□ 1.33
SNX5-202ENST00000377768 AQRO60306 1485 aaKnown RBP eCLIP23.33■■□□□ 1.331e-7■■■■□ 21.1
SNX5-202ENST00000377768 PBRM1Q86U86 1689 aa23.31■■□□□ 1.32
SNX5-202ENST00000377768 FHOD3Q2V2M9 1422 aa23.27■■□□□ 1.32
SNX5-202ENST00000377768 ZNF316A6NFI3 1004 aaPredicted RBP23.27■■□□□ 1.32
SNX5-202ENST00000377768 HNRNPUL2Q1KMD3 747 aaKnown RBP23.27■■□□□ 1.32
SNX5-202ENST00000377768 IFT140Q96RY7 1462 aa23.26■■□□□ 1.31
SNX5-202ENST00000377768 EFCAB5A4FU69 1503 aa23.25■■□□□ 1.31
SNX5-202ENST00000377768 ZNF608Q9ULD9 1512 aaPredicted RBP23.25■■□□□ 1.31
SNX5-202ENST00000377768 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
SNX5-202ENST00000377768 PCF11O94913 1555 aaKnown RBP23.21■■□□□ 1.31
SNX5-202ENST00000377768 THOC2Q8NI27 1593 aaKnown RBP23.21■■□□□ 1.31
SNX5-202ENST00000377768 GRIN2BQ13224 1484 aa23.21■■□□□ 1.31
SNX5-202ENST00000377768 ADAMTS12P58397 1594 aa23.2■■□□□ 1.3
SNX5-202ENST00000377768 TIAM1Q13009 1591 aa23.2■■□□□ 1.3
SNX5-202ENST00000377768 ATP1B4Q9UN42 357 aaPredicted RBP23.17■■□□□ 1.3
SNX5-202ENST00000377768 MAP3K1Q13233 1512 aa23.14■■□□□ 1.3
SNX5-202ENST00000377768 EIF4G3O43432 1585 aaKnown RBP23.12■■□□□ 1.29
SNX5-202ENST00000377768 SAMD9Q5K651 1589 aa23.12■■□□□ 1.29
SNX5-202ENST00000377768 FYCO1Q9BQS8 1478 aa23.1■■□□□ 1.29
SNX5-202ENST00000377768 LRRC9Q6ZRR7 1453 aa23.09■■□□□ 1.29
SNX5-202ENST00000377768 CFAP43Q8NDM7 1665 aa23.09■■□□□ 1.29
SNX5-202ENST00000377768 CASKIN1Q8WXD9 1431 aa23.09■■□□□ 1.29
SNX5-202ENST00000377768 RRBP1Q9P2E9 1410 aaKnown RBP23.09■■□□□ 1.29
SNX5-202ENST00000377768 YTHDC1Q96MU7 727 aaKnown RBP23.08■■□□□ 1.29
SNX5-202ENST00000377768 FMN1Q68DA7 1419 aa23.08■■□□□ 1.29
SNX5-202ENST00000377768 SNAPC4Q5SXM2 1469 aa23.07■■□□□ 1.28
SNX5-202ENST00000377768 MIER1Q8N108 512 aa23.05■■□□□ 1.28
SNX5-202ENST00000377768 IQGAP2Q13576 1575 aa23.04■■□□□ 1.28
SNX5-202ENST00000377768 CCNB3Q8WWL7 1395 aa23.03■■□□□ 1.28
SNX5-202ENST00000377768 PHLDB1Q86UU1 1377 aa22.97■■□□□ 1.27
SNX5-202ENST00000377768 GRIN2AQ12879 1464 aa22.96■■□□□ 1.27
SNX5-202ENST00000377768 LRRIQ1Q96JM4 1722 aa22.94■■□□□ 1.26
SNX5-202ENST00000377768 ITGAEP38570 1179 aa22.93■■□□□ 1.26
SNX5-202ENST00000377768 MAGI1Q96QZ7 1491 aaPredicted RBP22.93■■□□□ 1.26
SNX5-202ENST00000377768 KIAA0586Q9BVV6 1533 aa22.9■■□□□ 1.26
SNX5-202ENST00000377768 UGGT2Q9NYU1 1516 aa22.89■■□□□ 1.25
SNX5-202ENST00000377768 CHMP7Q8WUX9 453 aaPredicted RBP22.89■■□□□ 1.25
SNX5-202ENST00000377768 FBLN2P98095 1184 aa22.88■■□□□ 1.25
SNX5-202ENST00000377768 SYNJ2O15056 1496 aa22.87■■□□□ 1.25
SNX5-202ENST00000377768 MTUS2Q5JR59 1369 aa22.87■■□□□ 1.25
SNX5-202ENST00000377768 FAM50AQ14320 339 aaKnown RBP22.84■■□□□ 1.25
SNX5-202ENST00000377768 CEP170Q5SW79 1584 aa22.83■■□□□ 1.24
SNX5-202ENST00000377768 DISP1Q96F81 1524 aa22.81■■□□□ 1.24
SNX5-202ENST00000377768 KIAA0556O60303 1618 aa22.8■■□□□ 1.24
SNX5-202ENST00000377768 HECW1Q76N89 1606 aa22.8■■□□□ 1.24
SNX5-202ENST00000377768 CCDC18Q5T9S5 1454 aa22.77■■□□□ 1.24
SNX5-202ENST00000377768 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
SNX5-202ENST00000377768 CLSPNQ9HAW4 1339 aa22.76■■□□□ 1.23
SNX5-202ENST00000377768 ARID3CA6NKF2 412 aa22.75■■□□□ 1.23
SNX5-202ENST00000377768 MAGI3Q5TCQ9 1506 aa22.75■■□□□ 1.23
SNX5-202ENST00000377768 EHBP1L1Q8N3D4 1523 aa22.75■■□□□ 1.23
SNX5-202ENST00000377768 NCOA2Q15596 1464 aa22.74■■□□□ 1.23
SNX5-202ENST00000377768 EPRSP07814 1512 aaKnown RBP22.74■■□□□ 1.23
SNX5-202ENST00000377768 CDK13Q14004 1512 aaKnown RBP22.73■■□□□ 1.23
SNX5-202ENST00000377768 NUP160Q12769 1436 aa22.73■■□□□ 1.23
SNX5-202ENST00000377768 FGD6Q6ZV73 1430 aa22.73■■□□□ 1.23
SNX5-202ENST00000377768 SUPT6HQ7KZ85 1726 aaKnown RBP22.73■■□□□ 1.23
SNX5-202ENST00000377768 RAB3GAP2Q9H2M9 1393 aa22.69■■□□□ 1.22
SNX5-202ENST00000377768 MYOM3Q5VTT5 1437 aa22.66■■□□□ 1.22
SNX5-202ENST00000377768 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.66■■□□□ 1.22
SNX5-202ENST00000377768 JPH4Q96JJ6 628 aa22.65■■□□□ 1.22
SNX5-202ENST00000377768 SUPT16HQ9Y5B9 1047 aaKnown RBP22.65■■□□□ 1.22
SNX5-202ENST00000377768 SETD5Q9C0A6 1442 aa22.65■■□□□ 1.22
SNX5-202ENST00000377768 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.21
SNX5-202ENST00000377768 NUP153P49790 1475 aaKnown RBP22.62■■□□□ 1.21
SNX5-202ENST00000377768 ARHGEF11O15085 1522 aa22.62■■□□□ 1.21
SNX5-202ENST00000377768 CARMIL2Q6F5E8 1435 aa22.61■■□□□ 1.21
SNX5-202ENST00000377768 PLB1Q6P1J6 1458 aa22.58■■□□□ 1.2
SNX5-202ENST00000377768 PTPN23Q9H3S7 1636 aa22.56■■□□□ 1.2
SNX5-202ENST00000377768 CHD1O14646 1710 aa22.56■■□□□ 1.2
SNX5-202ENST00000377768 PTPRKQ15262 1439 aa22.54■■□□□ 1.2
SNX5-202ENST00000377768 MAPKBP1O60336 1514 aa22.49■■□□□ 1.19
SNX5-202ENST00000377768 TSHZ2Q9NRE2 1034 aa22.49■■□□□ 1.19
SNX5-202ENST00000377768 CDK11AQ9UQ88 783 aaPredicted RBP22.47■■□□□ 1.19
SNX5-202ENST00000377768 PRG4Q92954 1404 aaPredicted RBP22.46■■□□□ 1.19
SNX5-202ENST00000377768 TCOF1Q13428 1488 aaKnown RBP22.46■■□□□ 1.19
SNX5-202ENST00000377768 MIA2Q96PC5 1412 aa22.44■■□□□ 1.18
SNX5-202ENST00000377768 HFM1A2PYH4 1435 aa22.43■■□□□ 1.18
SNX5-202ENST00000377768 ABCA8O94911 1581 aa22.42■■□□□ 1.18
SNX5-202ENST00000377768 TROQ12816 1431 aaPredicted RBP22.41■■□□□ 1.18
SNX5-202ENST00000377768 ANP32EQ9BTT0 268 aa22.41■■□□□ 1.18
SNX5-202ENST00000377768 CHIC2Q9UKJ5 165 aa22.4■■□□□ 1.18
SNX5-202ENST00000377768 NAIPQ13075 1403 aa22.39■■□□□ 1.18
SNX5-202ENST00000377768 PTPRGP23470 1445 aa22.36■■□□□ 1.17
SNX5-202ENST00000377768 KIF14Q15058 1648 aa22.36■■□□□ 1.17
SNX5-202ENST00000377768 RRP7BPQ9NSQ0 103 aa22.36■■□□□ 1.17
SNX5-202ENST00000377768 ZNF644Q9H582 1327 aaPredicted RBP22.34■■□□□ 1.17
SNX5-202ENST00000377768 SHROOM2Q13796 1616 aa22.33■■□□□ 1.17
SNX5-202ENST00000377768 ATP10BO94823 1461 aa22.33■■□□□ 1.17
SNX5-202ENST00000377768 SIN3AQ96ST3 1273 aa22.32■■□□□ 1.16
SNX5-202ENST00000377768 ADCY10Q96PN6 1610 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms