RNA–Protein interactions for RNA: ENST00000377768.7

SNX5-202, Transcript of sorting nexin 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX5, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-202ENST00000377768 NISCHQ9Y2I1 1504 aa33.62■■■□□ 2.97
SNX5-202ENST00000377768 CCDC180Q9P1Z9 1646 aa29.01■■■□□ 2.24
SNX5-202ENST00000377768 ZCCHC6Q5VYS8 1495 aaKnown RBP28.32■■■□□ 2.12
SNX5-202ENST00000377768 SHROOM4Q9ULL8 1493 aa28.01■■■□□ 2.07
SNX5-202ENST00000377768 DCAF8L2P0C7V8 631 aa27.92■■■□□ 2.06
SNX5-202ENST00000377768 DCAF1Q9Y4B6 1507 aa27.66■■■□□ 2.02
SNX5-202ENST00000377768 ABCC9O60706 1549 aa27.33■■□□□ 1.97
SNX5-202ENST00000377768 MYO15BQ96JP2 1530 aa27.14■■□□□ 1.94
SNX5-202ENST00000377768 SUPT5HO00267 1087 aaKnown RBP27.13■■□□□ 1.93
SNX5-202ENST00000377768 SCRIBQ14160 1630 aa26.96■■□□□ 1.91
SNX5-202ENST00000377768 NACADO15069 1562 aa26.95■■□□□ 1.9
SNX5-202ENST00000377768 RB1CC1Q8TDY2 1594 aa26.66■■□□□ 1.86
SNX5-202ENST00000377768 RSF1Q96T23 1441 aaPredicted RBP26.3■■□□□ 1.8
SNX5-202ENST00000377768 UNC13AQ9UPW8 1703 aa26.24■■□□□ 1.79
SNX5-202ENST00000377768 CECR2Q9BXF3 1484 aa26.21■■□□□ 1.79
SNX5-202ENST00000377768 MROH2BQ7Z745 1585 aa26.07■■□□□ 1.76
SNX5-202ENST00000377768 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
SNX5-202ENST00000377768 HRCP23327 699 aa26.04■■□□□ 1.76
SNX5-202ENST00000377768 PABPN1Q86U42 306 aaKnown RBP eCLIP25.92■■□□□ 1.74
SNX5-202ENST00000377768 BICRAQ9NZM4 1560 aa25.91■■□□□ 1.74
SNX5-202ENST00000377768 BAZ1AQ9NRL2 1556 aaPredicted RBP25.91■■□□□ 1.74
SNX5-202ENST00000377768 WIZO95785 1651 aa25.9■■□□□ 1.74
SNX5-202ENST00000377768 SMARCA4P51532 1647 aa25.77■■□□□ 1.72
SNX5-202ENST00000377768 TOP2AP11388 1531 aaKnown RBP25.53■■□□□ 1.68
SNX5-202ENST00000377768 PCGF6Q9BYE7 350 aa25.49■■□□□ 1.67
SNX5-202ENST00000377768 PPARGC1BQ86YN6 1023 aaKnown RBP25.38■■□□□ 1.65
SNX5-202ENST00000377768 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
SNX5-202ENST00000377768 SMARCA2P51531 1590 aa25.35■■□□□ 1.65
SNX5-202ENST00000377768 CCDC88BA6NC98 1476 aa25.35■■□□□ 1.65
SNX5-202ENST00000377768 PEG3Q9GZU2 1588 aa25.34■■□□□ 1.65
SNX5-202ENST00000377768 EIF4G1Q04637 1599 aaKnown RBP25.28■■□□□ 1.64
SNX5-202ENST00000377768 ATAD2BQ9ULI0 1458 aa25.25■■□□□ 1.63
SNX5-202ENST00000377768 LOC105371045A0A1W2PR82 267 aa25.21■■□□□ 1.63
SNX5-202ENST00000377768 BAZ1BQ9UIG0 1483 aaKnown RBP25.15■■□□□ 1.62
SNX5-202ENST00000377768 FAM9AQ8IZU1 332 aaPredicted RBP25.07■■□□□ 1.6
SNX5-202ENST00000377768 ABCC8Q09428 1581 aa25.05■■□□□ 1.6
SNX5-202ENST00000377768 NCAPD3P42695 1498 aa24.9■■□□□ 1.58
SNX5-202ENST00000377768 HMGXB3Q12766 1538 aa24.89■■□□□ 1.57
SNX5-202ENST00000377768 TRIM26Q12899 539 aaPredicted RBP24.86■■□□□ 1.57
SNX5-202ENST00000377768 EHMT2Q96KQ7 1210 aa24.83■■□□□ 1.57
SNX5-202ENST00000377768 WRNQ14191 1432 aaPredicted RBP eCLIP24.74■■□□□ 1.556e-6■■■□□ 16.7
SNX5-202ENST00000377768 PELP1Q8IZL8 1130 aaKnown RBP24.73■■□□□ 1.55
SNX5-202ENST00000377768 CC2D2AQ9P2K1 1620 aa24.66■■□□□ 1.54
SNX5-202ENST00000377768 SYNJ1O43426 1573 aa24.65■■□□□ 1.54
SNX5-202ENST00000377768 SOGA1O94964 1423 aa24.65■■□□□ 1.54
SNX5-202ENST00000377768 ZEB1P37275 1124 aaPredicted RBP24.59■■□□□ 1.53
SNX5-202ENST00000377768 RUSC2Q8N2Y8 1516 aa24.56■■□□□ 1.52
SNX5-202ENST00000377768 CFTRP13569 1480 aa24.5■■□□□ 1.51
SNX5-202ENST00000377768 EEA1Q15075 1411 aa24.49■■□□□ 1.51
SNX5-202ENST00000377768 SCAF1Q9H7N4 1312 aaKnown RBP24.45■■□□□ 1.5
SNX5-202ENST00000377768 CSRNP3Q8WYN3 585 aa24.45■■□□□ 1.5
SNX5-202ENST00000377768 TOP2BQ02880 1626 aa24.44■■□□□ 1.5
SNX5-202ENST00000377768 BIVM-ERCC5R4GMW8 1640 aa24.38■■□□□ 1.49
SNX5-202ENST00000377768 PRDM2Q13029 1718 aa24.35■■□□□ 1.49
SNX5-202ENST00000377768 CADPSQ9ULU8 1353 aa24.35■■□□□ 1.49
SNX5-202ENST00000377768 CUX1P39880 1505 aa24.33■■□□□ 1.49
SNX5-202ENST00000377768 UBTFP17480 764 aaKnown RBP24.26■■□□□ 1.47
SNX5-202ENST00000377768 GOLGA3Q08378 1498 aa24.26■■□□□ 1.47
SNX5-202ENST00000377768 TNIKQ9UKE5 1360 aa24.25■■□□□ 1.47
SNX5-202ENST00000377768 CEP162Q5TB80 1403 aa24.23■■□□□ 1.47
SNX5-202ENST00000377768 CEP164Q9UPV0 1460 aa24.21■■□□□ 1.47
SNX5-202ENST00000377768 KIF21BO75037 1637 aa24.19■■□□□ 1.46
SNX5-202ENST00000377768 NESP48681 1621 aa24.13■■□□□ 1.45
SNX5-202ENST00000377768 FANCD2Q9BXW9 1451 aa24.12■■□□□ 1.45
SNX5-202ENST00000377768 RAPGEF2Q9Y4G8 1499 aa24.11■■□□□ 1.45
SNX5-202ENST00000377768 DNAJC5BQ9UF47 199 aa24.1■■□□□ 1.45
SNX5-202ENST00000377768 KIF27Q86VH2 1401 aa24.04■■□□□ 1.44
SNX5-202ENST00000377768 FGD5Q6ZNL6 1462 aa24.01■■□□□ 1.43
SNX5-202ENST00000377768 LAMC3Q9Y6N6 1575 aa23.99■■□□□ 1.43
SNX5-202ENST00000377768 PRXQ9BXM0 1461 aa23.98■■□□□ 1.43
SNX5-202ENST00000377768 CUX2O14529 1486 aa23.95■■□□□ 1.42
SNX5-202ENST00000377768 ACIN1Q9UKV3 1341 aaKnown RBP23.94■■□□□ 1.42
SNX5-202ENST00000377768 ERICH3Q5RHP9 1530 aa23.94■■□□□ 1.42
SNX5-202ENST00000377768 CLIP1P30622 1438 aa23.93■■□□□ 1.42
SNX5-202ENST00000377768 DNMBPQ6XZF7 1577 aa23.92■■□□□ 1.42
SNX5-202ENST00000377768 RANGAP1P46060 587 aaPredicted RBP23.91■■□□□ 1.42
SNX5-202ENST00000377768 TOPBP1Q92547 1522 aa23.89■■□□□ 1.42
SNX5-202ENST00000377768 TTBK1Q5TCY1 1321 aaPredicted RBP23.86■■□□□ 1.41
SNX5-202ENST00000377768 NEUROD1Q13562 356 aa23.85■■□□□ 1.41
SNX5-202ENST00000377768 POLA1P09884 1462 aaPredicted RBP23.83■■□□□ 1.4
SNX5-202ENST00000377768 RAD54L2Q9Y4B4 1467 aa23.82■■□□□ 1.4
SNX5-202ENST00000377768 PDS5BQ9NTI5 1447 aa23.82■■□□□ 1.4
SNX5-202ENST00000377768 IGF1RP08069 1367 aa23.82■■□□□ 1.4
SNX5-202ENST00000377768 URB2Q14146 1524 aaKnown RBP23.8■■□□□ 1.4
SNX5-202ENST00000377768 KIF21AQ7Z4S6 1674 aa23.78■■□□□ 1.4
SNX5-202ENST00000377768 VPS8Q8N3P4 1428 aa23.75■■□□□ 1.39
SNX5-202ENST00000377768 ABCA10Q8WWZ4 1543 aa23.74■■□□□ 1.39
SNX5-202ENST00000377768 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
SNX5-202ENST00000377768 CARMIL1Q5VZK9 1371 aa23.71■■□□□ 1.39
SNX5-202ENST00000377768 MYT1Q01538 1121 aa23.7■■□□□ 1.38
SNX5-202ENST00000377768 CCER1Q8TC90 406 aaPredicted RBP23.67■■□□□ 1.38
SNX5-202ENST00000377768 GTF3C3Q9Y5Q9 886 aa23.66■■□□□ 1.38
SNX5-202ENST00000377768 ARAP1Q96P48 1450 aa23.64■■□□□ 1.37
SNX5-202ENST00000377768 CENPBP07199 599 aaPredicted RBP23.63■■□□□ 1.37
SNX5-202ENST00000377768 DIEXFQ68CQ4 756 aaKnown RBP23.62■■□□□ 1.37
SNX5-202ENST00000377768 WDR97A6NE52 1622 aa23.62■■□□□ 1.37
SNX5-202ENST00000377768 APLP2Q06481 763 aa23.58■■□□□ 1.36
SNX5-202ENST00000377768 TDRD9Q8NDG6 1382 aaKnown RBP23.56■■□□□ 1.36
SNX5-202ENST00000377768 ARHGAP35Q9NRY4 1499 aa23.56■■□□□ 1.36
SNX5-202ENST00000377768 CUL7Q14999 1698 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms