RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 ILDR1Q86SU0 546 aaPredicted RBP15.23■□□□□ 0.03
USP11-203ENST00000377080 WDR97A6NE52 1622 aa15.23■□□□□ 0.03
USP11-203ENST00000377080 VPS8Q8N3P4 1428 aa15.23■□□□□ 0.03
USP11-203ENST00000377080 MAGI1Q96QZ7 1491 aaPredicted RBP15.22■□□□□ 0.03
USP11-203ENST00000377080 CLIP1P30622 1438 aa15.22■□□□□ 0.03
USP11-203ENST00000377080 CUX1P39880 1505 aa15.21■□□□□ 0.03
USP11-203ENST00000377080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
USP11-203ENST00000377080 SYNJ2O15056 1496 aa15.19■□□□□ 0.02
USP11-203ENST00000377080 PRXQ9BXM0 1461 aa15.16■□□□□ 0.02
USP11-203ENST00000377080 KIF13AQ9H1H9 1805 aa15.16■□□□□ 0.02
USP11-203ENST00000377080 GRIN2BQ13224 1484 aa15.15■□□□□ 0.02
USP11-203ENST00000377080 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
USP11-203ENST00000377080 RAPGEF2Q9Y4G8 1499 aa15.13■□□□□ 0.01
USP11-203ENST00000377080 ERCC6L2Q5T890 1561 aa15.11■□□□□ 0.01
USP11-203ENST00000377080 PELP1Q8IZL8 1130 aaKnown RBP15.1■□□□□ 0.01
USP11-203ENST00000377080 APLP2Q06481 763 aa15.08■□□□□ 0
USP11-203ENST00000377080 CLSPNQ9HAW4 1339 aa15.08■□□□□ 0
USP11-203ENST00000377080 KIF27Q86VH2 1401 aa15.07■□□□□ 0
USP11-203ENST00000377080 ABCA5Q8WWZ7 1642 aa15.06■□□□□ 0
USP11-203ENST00000377080 DIEXFQ68CQ4 756 aaKnown RBP15.04■□□□□ -0
USP11-203ENST00000377080 CEP170Q5SW79 1584 aa15.03■□□□□ -0
USP11-203ENST00000377080 ABCA10Q8WWZ4 1543 aa15.03■□□□□ -0
USP11-203ENST00000377080 KDM4FA0A1W2PPD8 638 aa15.03■□□□□ -0
USP11-203ENST00000377080 ZNF316A6NFI3 1004 aaPredicted RBP15.02■□□□□ -0
USP11-203ENST00000377080 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
USP11-203ENST00000377080 ACIN1Q9UKV3 1341 aaKnown RBP14.97□□□□□ -0.01
USP11-203ENST00000377080 GRIN2AQ12879 1464 aa14.97□□□□□ -0.01
USP11-203ENST00000377080 SHROOM2Q13796 1616 aa14.97□□□□□ -0.01
USP11-203ENST00000377080 CENPBP07199 599 aaPredicted RBP14.97□□□□□ -0.01
USP11-203ENST00000377080 SCAF1Q9H7N4 1312 aaKnown RBP14.96□□□□□ -0.01
USP11-203ENST00000377080 KDM6BO15054 1643 aa14.96□□□□□ -0.01
USP11-203ENST00000377080 ADAMTS12P58397 1594 aa14.95□□□□□ -0.02
USP11-203ENST00000377080 FAM69CQ0P6D2 419 aa14.94□□□□□ -0.02
USP11-203ENST00000377080 ABCC10Q5T3U5 1492 aa14.94□□□□□ -0.02
USP11-203ENST00000377080 RRBP1Q9P2E9 1410 aaKnown RBP14.93□□□□□ -0.02
USP11-203ENST00000377080 NUP160Q12769 1436 aa14.92□□□□□ -0.02
USP11-203ENST00000377080 DIP2BQ9P265 1576 aa14.91□□□□□ -0.02
USP11-203ENST00000377080 TSPOAP1O95153 1857 aa14.9□□□□□ -0.02
USP11-203ENST00000377080 MAPKBP1O60336 1514 aa14.87□□□□□ -0.03
USP11-203ENST00000377080 TTBK1Q5TCY1 1321 aaPredicted RBP14.87□□□□□ -0.03
USP11-203ENST00000377080 IGF1RP08069 1367 aa14.85□□□□□ -0.03
USP11-203ENST00000377080 FHAD1B1AJZ9 1412 aa14.85□□□□□ -0.03
USP11-203ENST00000377080 ARHGAP35Q9NRY4 1499 aa14.85□□□□□ -0.03
USP11-203ENST00000377080 NPM1P06748 294 aaKnown RBP eCLIP14.85□□□□□ -0.03
USP11-203ENST00000377080 HNRNPUL2Q1KMD3 747 aaKnown RBP14.85□□□□□ -0.03
USP11-203ENST00000377080 PRG4Q92954 1404 aaPredicted RBP14.84□□□□□ -0.03
USP11-203ENST00000377080 HECW2Q9P2P5 1572 aa14.81□□□□□ -0.04
USP11-203ENST00000377080 NEUROD1Q13562 356 aa14.81□□□□□ -0.04
USP11-203ENST00000377080 DHX57Q6P158 1386 aaKnown RBP14.8□□□□□ -0.04
USP11-203ENST00000377080 ADGRL1O94910 1474 aa14.8□□□□□ -0.04
USP11-203ENST00000377080 ADCY10Q96PN6 1610 aa14.79□□□□□ -0.04
USP11-203ENST00000377080 CARMIL1Q5VZK9 1371 aa14.77□□□□□ -0.04
USP11-203ENST00000377080 CCNB3Q8WWL7 1395 aa14.77□□□□□ -0.04
USP11-203ENST00000377080 KANK4Q5T7N3 995 aaPredicted RBP14.76□□□□□ -0.05
USP11-203ENST00000377080 JPH4Q96JJ6 628 aa14.76□□□□□ -0.05
USP11-203ENST00000377080 TIAM1Q13009 1591 aa14.76□□□□□ -0.05
USP11-203ENST00000377080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.72□□□□□ -0.05
USP11-203ENST00000377080 EFCAB5A4FU69 1503 aa14.71□□□□□ -0.05
USP11-203ENST00000377080 CUL7Q14999 1698 aa14.71□□□□□ -0.06
USP11-203ENST00000377080 CFAP43Q8NDM7 1665 aa14.7□□□□□ -0.06
USP11-203ENST00000377080 LRRC9Q6ZRR7 1453 aa14.69□□□□□ -0.06
USP11-203ENST00000377080 TIMELESSQ9UNS1 1208 aa14.68□□□□□ -0.06
USP11-203ENST00000377080 FBXO41Q8TF61 875 aa14.67□□□□□ -0.06
USP11-203ENST00000377080 GTF3C3Q9Y5Q9 886 aa14.67□□□□□ -0.06
USP11-203ENST00000377080 PPRC1Q5VV67 1664 aaKnown RBP14.67□□□□□ -0.06
USP11-203ENST00000377080 MIER1Q8N108 512 aa14.65□□□□□ -0.06
USP11-203ENST00000377080 RANGAP1P46060 587 aaPredicted RBP14.64□□□□□ -0.07
USP11-203ENST00000377080 FYCO1Q9BQS8 1478 aa14.63□□□□□ -0.07
USP11-203ENST00000377080 CASKIN1Q8WXD9 1431 aa14.62□□□□□ -0.07
USP11-203ENST00000377080 CTTNBP2Q8WZ74 1663 aa14.61□□□□□ -0.07
USP11-203ENST00000377080 SETD5Q9C0A6 1442 aa14.61□□□□□ -0.07
USP11-203ENST00000377080 KIAA0586Q9BVV6 1533 aa14.61□□□□□ -0.07
USP11-203ENST00000377080 GLI2P10070 1586 aa14.6□□□□□ -0.07
USP11-203ENST00000377080 RAB3GAP2Q9H2M9 1393 aa14.57□□□□□ -0.08
USP11-203ENST00000377080 FMN1Q68DA7 1419 aa14.57□□□□□ -0.08
USP11-203ENST00000377080 COL17A1Q9UMD9 1497 aaPredicted RBP14.57□□□□□ -0.08
USP11-203ENST00000377080 PCF11O94913 1555 aaKnown RBP14.56□□□□□ -0.08
USP11-203ENST00000377080 ASXL2Q76L83 1435 aa14.55□□□□□ -0.08
USP11-203ENST00000377080 PLB1Q6P1J6 1458 aa14.54□□□□□ -0.08
USP11-203ENST00000377080 ABCC2Q92887 1545 aa14.54□□□□□ -0.08
USP11-203ENST00000377080 MAP3K4Q9Y6R4 1608 aa14.53□□□□□ -0.08
USP11-203ENST00000377080 PHLDB1Q86UU1 1377 aa14.52□□□□□ -0.08
USP11-203ENST00000377080 SAMD9Q5K651 1589 aa14.51□□□□□ -0.09
USP11-203ENST00000377080 PTPRGP23470 1445 aa14.51□□□□□ -0.09
USP11-203ENST00000377080 TEX14Q8IWB6 1497 aa14.5□□□□□ -0.09
USP11-203ENST00000377080 LMTK3Q96Q04 1460 aa14.5□□□□□ -0.09
USP11-203ENST00000377080 IQGAP2Q13576 1575 aa14.5□□□□□ -0.09
USP11-203ENST00000377080 CARMIL2Q6F5E8 1435 aa14.47□□□□□ -0.09
USP11-203ENST00000377080 EPRSP07814 1512 aaKnown RBP14.46□□□□□ -0.09
USP11-203ENST00000377080 FHOD3Q2V2M9 1422 aa14.43□□□□□ -0.1
USP11-203ENST00000377080 MYT1Q01538 1121 aa14.43□□□□□ -0.1
USP11-203ENST00000377080 UHRF1BP1LA0JNW5 1464 aa14.43□□□□□ -0.1
USP11-203ENST00000377080 FGD6Q6ZV73 1430 aa14.42□□□□□ -0.1
USP11-203ENST00000377080 DISP1Q96F81 1524 aa14.41□□□□□ -0.1
USP11-203ENST00000377080 YTHDC1Q96MU7 727 aaKnown RBP14.4□□□□□ -0.1
USP11-203ENST00000377080 ZCCHC11Q5TAX3 1644 aaKnown RBP14.4□□□□□ -0.1
USP11-203ENST00000377080 HFM1A2PYH4 1435 aa14.4□□□□□ -0.1
USP11-203ENST00000377080 UACAQ9BZF9 1416 aa14.4□□□□□ -0.1
USP11-203ENST00000377080 SUPT6HQ7KZ85 1726 aaKnown RBP14.39□□□□□ -0.11
USP11-203ENST00000377080 EHBP1L1Q8N3D4 1523 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms