RNA–Protein interactions for RNA: ENST00000376751.7

RNF39-202, Transcript of ring finger protein 39, humanhuman

TSL 1 (best) BASIC

Gene RNF39, Length 1,970 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-202ENST00000376751 PCF11O94913 1555 aaKnown RBP32.73■■■□□ 2.83
RNF39-202ENST00000376751 EFCAB5A4FU69 1503 aa32.72■■■□□ 2.83
RNF39-202ENST00000376751 MRC2Q9UBG0 1479 aa32.72■■■□□ 2.83
RNF39-202ENST00000376751 RRBP1Q9P2E9 1410 aaKnown RBP32.72■■■□□ 2.83
RNF39-202ENST00000376751 FHOD3Q2V2M9 1422 aa32.69■■■□□ 2.82
RNF39-202ENST00000376751 FHAD1B1AJZ9 1412 aa32.68■■■□□ 2.82
RNF39-202ENST00000376751 P3H3Q8IVL6 736 aa32.68■■■□□ 2.82
RNF39-202ENST00000376751 CFAP43Q8NDM7 1665 aa32.65■■■□□ 2.82
RNF39-202ENST00000376751 PBRM1Q86U86 1689 aa32.63■■■□□ 2.81
RNF39-202ENST00000376751 LRRC9Q6ZRR7 1453 aa32.59■■■□□ 2.81
RNF39-202ENST00000376751 CCNB3Q8WWL7 1395 aa32.55■■■□□ 2.8
RNF39-202ENST00000376751 FYCO1Q9BQS8 1478 aa32.55■■■□□ 2.8
RNF39-202ENST00000376751 SAMD9Q5K651 1589 aa32.55■■■□□ 2.8
RNF39-202ENST00000376751 AQRO60306 1485 aaKnown RBP eCLIP32.53■■■□□ 2.8
RNF39-202ENST00000376751 WDR62O43379 1518 aa32.52■■■□□ 2.8
RNF39-202ENST00000376751 CASKIN1Q8WXD9 1431 aa32.51■■■□□ 2.8
RNF39-202ENST00000376751 ADAMTS12P58397 1594 aa32.49■■■□□ 2.79
RNF39-202ENST00000376751 SNAPC4Q5SXM2 1469 aa32.45■■■□□ 2.79
RNF39-202ENST00000376751 FMN1Q68DA7 1419 aa32.43■■■□□ 2.78
RNF39-202ENST00000376751 PHLDB1Q86UU1 1377 aa32.42■■■□□ 2.78
RNF39-202ENST00000376751 IFT140Q96RY7 1462 aa32.42■■■□□ 2.78
RNF39-202ENST00000376751 ATP1B4Q9UN42 357 aaPredicted RBP32.4■■■□□ 2.78
RNF39-202ENST00000376751 ZNF608Q9ULD9 1512 aaPredicted RBP32.4■■■□□ 2.78
RNF39-202ENST00000376751 GRIN2BQ13224 1484 aa32.39■■■□□ 2.78
RNF39-202ENST00000376751 LRRIQ1Q96JM4 1722 aa32.35■■■□□ 2.77
RNF39-202ENST00000376751 DHX57Q6P158 1386 aaKnown RBP32.35■■■□□ 2.77
RNF39-202ENST00000376751 THOC2Q8NI27 1593 aaKnown RBP32.3■■■□□ 2.76
RNF39-202ENST00000376751 ERCC6Q03468 1493 aa32.29■■■□□ 2.76
RNF39-202ENST00000376751 IQGAP2Q13576 1575 aa32.29■■■□□ 2.76
RNF39-202ENST00000376751 ITGAEP38570 1179 aa32.28■■■□□ 2.76
RNF39-202ENST00000376751 EIF4G3O43432 1585 aaKnown RBP32.24■■■□□ 2.75
RNF39-202ENST00000376751 CLSPNQ9HAW4 1339 aa32.2■■■□□ 2.74
RNF39-202ENST00000376751 FAM50AQ14320 339 aaKnown RBP32.14■■■□□ 2.74
RNF39-202ENST00000376751 RAB3GAP2Q9H2M9 1393 aa32.13■■■□□ 2.73
RNF39-202ENST00000376751 MTUS2Q5JR59 1369 aa32.11■■■□□ 2.73
RNF39-202ENST00000376751 UGGT2Q9NYU1 1516 aa32.11■■■□□ 2.73
RNF39-202ENST00000376751 ZNF316A6NFI3 1004 aaPredicted RBP32.1■■■□□ 2.73
RNF39-202ENST00000376751 DIEXFQ68CQ4 756 aaKnown RBP32.09■■■□□ 2.73
RNF39-202ENST00000376751 FGD6Q6ZV73 1430 aa32.06■■■□□ 2.72
RNF39-202ENST00000376751 GRIN2AQ12879 1464 aa32.06■■■□□ 2.72
RNF39-202ENST00000376751 SETD5Q9C0A6 1442 aa32.06■■■□□ 2.72
RNF39-202ENST00000376751 HECW1Q76N89 1606 aa32.05■■■□□ 2.72
RNF39-202ENST00000376751 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.05■■■□□ 2.72
RNF39-202ENST00000376751 EHBP1L1Q8N3D4 1523 aa32.05■■■□□ 2.72
RNF39-202ENST00000376751 MAGI3Q5TCQ9 1506 aa32.04■■■□□ 2.72
RNF39-202ENST00000376751 KIAA0586Q9BVV6 1533 aa32.03■■■□□ 2.72
RNF39-202ENST00000376751 NCOA2Q15596 1464 aa32.03■■■□□ 2.72
RNF39-202ENST00000376751 SUPT6HQ7KZ85 1726 aaKnown RBP32.02■■■□□ 2.72
RNF39-202ENST00000376751 CCDC18Q5T9S5 1454 aa32.01■■■□□ 2.72
RNF39-202ENST00000376751 MAGI1Q96QZ7 1491 aaPredicted RBP31.99■■■□□ 2.71
RNF39-202ENST00000376751 KIAA0556O60303 1618 aa31.98■■■□□ 2.71
RNF39-202ENST00000376751 MAPKBP1O60336 1514 aa31.97■■■□□ 2.71
RNF39-202ENST00000376751 DISP1Q96F81 1524 aa31.97■■■□□ 2.71
RNF39-202ENST00000376751 ARHGEF11O15085 1522 aa31.95■■■□□ 2.7
RNF39-202ENST00000376751 EPRSP07814 1512 aaKnown RBP31.95■■■□□ 2.7
RNF39-202ENST00000376751 MYOM3Q5VTT5 1437 aa31.94■■■□□ 2.7
RNF39-202ENST00000376751 CDK13Q14004 1512 aaKnown RBP31.92■■■□□ 2.7
RNF39-202ENST00000376751 CEP170Q5SW79 1584 aa31.91■■■□□ 2.7
RNF39-202ENST00000376751 SYNJ2O15056 1496 aa31.9■■■□□ 2.7
RNF39-202ENST00000376751 PTPRKQ15262 1439 aa31.85■■■□□ 2.69
RNF39-202ENST00000376751 PTPN23Q9H3S7 1636 aa31.83■■■□□ 2.69
RNF39-202ENST00000376751 CHMP7Q8WUX9 453 aaPredicted RBP31.79■■■□□ 2.68
RNF39-202ENST00000376751 RAPGEF6Q8TEU7 1601 aa31.76■■■□□ 2.68
RNF39-202ENST00000376751 ARID3CA6NKF2 412 aa31.76■■■□□ 2.68
RNF39-202ENST00000376751 NUP160Q12769 1436 aa31.75■■■□□ 2.67
RNF39-202ENST00000376751 NUP153P49790 1475 aaKnown RBP31.75■■■□□ 2.67
RNF39-202ENST00000376751 TCOF1Q13428 1488 aaKnown RBP31.73■■■□□ 2.67
RNF39-202ENST00000376751 HFM1A2PYH4 1435 aa31.72■■■□□ 2.67
RNF39-202ENST00000376751 FBLN2P98095 1184 aa31.7■■■□□ 2.67
RNF39-202ENST00000376751 NAIPQ13075 1403 aa31.65■■■□□ 2.66
RNF39-202ENST00000376751 MIA2Q96PC5 1412 aa31.6■■■□□ 2.65
RNF39-202ENST00000376751 SIN3AQ96ST3 1273 aa31.59■■■□□ 2.65
RNF39-202ENST00000376751 PLB1Q6P1J6 1458 aa31.58■■■□□ 2.65
RNF39-202ENST00000376751 JPH4Q96JJ6 628 aa31.56■■■□□ 2.64
RNF39-202ENST00000376751 GCC2Q8IWJ2 1684 aa31.55■■■□□ 2.64
RNF39-202ENST00000376751 CARMIL2Q6F5E8 1435 aa31.54■■■□□ 2.64
RNF39-202ENST00000376751 UACAQ9BZF9 1416 aa31.54■■■□□ 2.64
RNF39-202ENST00000376751 MIER1Q8N108 512 aa31.52■■■□□ 2.64
RNF39-202ENST00000376751 NEUROD1Q13562 356 aa31.5■■■□□ 2.63
RNF39-202ENST00000376751 AKNAQ7Z591 1439 aa31.47■■■□□ 2.63
RNF39-202ENST00000376751 PRG4Q92954 1404 aaPredicted RBP31.47■■■□□ 2.63
RNF39-202ENST00000376751 CHIC2Q9UKJ5 165 aa31.46■■■□□ 2.63
RNF39-202ENST00000376751 TROQ12816 1431 aaPredicted RBP31.46■■■□□ 2.63
RNF39-202ENST00000376751 RRP7BPQ9NSQ0 103 aa31.45■■■□□ 2.62
RNF39-202ENST00000376751 KDM6BO15054 1643 aa31.45■■■□□ 2.62
RNF39-202ENST00000376751 ABCA8O94911 1581 aa31.43■■■□□ 2.62
RNF39-202ENST00000376751 CDK11AQ9UQ88 783 aaPredicted RBP31.43■■■□□ 2.62
RNF39-202ENST00000376751 CHD1O14646 1710 aa31.42■■■□□ 2.62
RNF39-202ENST00000376751 ADCY10Q96PN6 1610 aa31.41■■■□□ 2.62
RNF39-202ENST00000376751 KIF14Q15058 1648 aa31.41■■■□□ 2.62
RNF39-202ENST00000376751 DNMT1P26358 1616 aaKnown RBP31.4■■■□□ 2.62
RNF39-202ENST00000376751 DAPK1P53355 1430 aa31.38■■■□□ 2.61
RNF39-202ENST00000376751 TIMELESSQ9UNS1 1208 aa31.37■■■□□ 2.61
RNF39-202ENST00000376751 SCAF1Q9H7N4 1312 aaKnown RBP31.37■■■□□ 2.61
RNF39-202ENST00000376751 ACIN1Q9UKV3 1341 aaKnown RBP31.36■■■□□ 2.61
RNF39-202ENST00000376751 ZNF644Q9H582 1327 aaPredicted RBP31.35■■■□□ 2.61
RNF39-202ENST00000376751 ABCC5O15440 1437 aa31.34■■■□□ 2.61
RNF39-202ENST00000376751 ITSN2Q9NZM3 1697 aa31.34■■■□□ 2.61
RNF39-202ENST00000376751 DENND4BO75064 1496 aaPredicted RBP31.31■■■□□ 2.6
RNF39-202ENST00000376751 GPATCH8Q9UKJ3 1502 aaKnown RBP31.29■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms