RNA–Protein interactions for RNA: ENST00000375127.5

TMCO4-202, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 1 (best) BASIC

Gene TMCO4, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-202ENST00000375127 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
TMCO4-202ENST00000375127 GAPVD1Q14C86 1478 aa18.77■□□□□ 0.6
TMCO4-202ENST00000375127 TARBP1Q13395 1621 aaKnown RBP18.77■□□□□ 0.6
TMCO4-202ENST00000375127 ZNF608Q9ULD9 1512 aaPredicted RBP18.76■□□□□ 0.59
TMCO4-202ENST00000375127 DIEXFQ68CQ4 756 aaKnown RBP18.75■□□□□ 0.59
TMCO4-202ENST00000375127 APLP2Q06481 763 aa18.75■□□□□ 0.59
TMCO4-202ENST00000375127 ABCA5Q8WWZ7 1642 aa18.73■□□□□ 0.59
TMCO4-202ENST00000375127 ARHGAP35Q9NRY4 1499 aa18.73■□□□□ 0.59
TMCO4-202ENST00000375127 KANK4Q5T7N3 995 aaPredicted RBP18.67■□□□□ 0.58
TMCO4-202ENST00000375127 WDR62O43379 1518 aa18.67■□□□□ 0.58
TMCO4-202ENST00000375127 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.57
TMCO4-202ENST00000375127 THOC2Q8NI27 1593 aaKnown RBP18.64■□□□□ 0.57
TMCO4-202ENST00000375127 CUL7Q14999 1698 aa18.63■□□□□ 0.57
TMCO4-202ENST00000375127 PBRM1Q86U86 1689 aa18.61■□□□□ 0.57
TMCO4-202ENST00000375127 ZNF316A6NFI3 1004 aaPredicted RBP18.61■□□□□ 0.57
TMCO4-202ENST00000375127 FHOD3Q2V2M9 1422 aa18.6■□□□□ 0.57
TMCO4-202ENST00000375127 IFT140Q96RY7 1462 aa18.56■□□□□ 0.56
TMCO4-202ENST00000375127 FBLN2P98095 1184 aa18.56■□□□□ 0.56
TMCO4-202ENST00000375127 CTTNBP2Q8WZ74 1663 aa18.54■□□□□ 0.56
TMCO4-202ENST00000375127 EIF4G3O43432 1585 aaKnown RBP18.54■□□□□ 0.56
TMCO4-202ENST00000375127 GRIN2BQ13224 1484 aa18.52■□□□□ 0.55
TMCO4-202ENST00000375127 SNAPC4Q5SXM2 1469 aa18.51■□□□□ 0.55
TMCO4-202ENST00000375127 ADAMTS12P58397 1594 aa18.48■□□□□ 0.55
TMCO4-202ENST00000375127 FHAD1B1AJZ9 1412 aa18.48■□□□□ 0.55
TMCO4-202ENST00000375127 ARID3CA6NKF2 412 aa18.47■□□□□ 0.55
TMCO4-202ENST00000375127 PCF11O94913 1555 aaKnown RBP18.44■□□□□ 0.54
TMCO4-202ENST00000375127 CHMP7Q8WUX9 453 aaPredicted RBP18.42■□□□□ 0.54
TMCO4-202ENST00000375127 DHX57Q6P158 1386 aaKnown RBP18.4■□□□□ 0.54
TMCO4-202ENST00000375127 RRBP1Q9P2E9 1410 aaKnown RBP18.39■□□□□ 0.54
TMCO4-202ENST00000375127 ITGAEP38570 1179 aa18.39■□□□□ 0.53
TMCO4-202ENST00000375127 MIER1Q8N108 512 aa18.36■□□□□ 0.53
TMCO4-202ENST00000375127 GRIN2AQ12879 1464 aa18.35■□□□□ 0.53
TMCO4-202ENST00000375127 CLSPNQ9HAW4 1339 aa18.35■□□□□ 0.53
TMCO4-202ENST00000375127 TIAM1Q13009 1591 aa18.35■□□□□ 0.53
TMCO4-202ENST00000375127 IQGAP2Q13576 1575 aa18.35■□□□□ 0.53
TMCO4-202ENST00000375127 EFCAB5A4FU69 1503 aa18.34■□□□□ 0.53
TMCO4-202ENST00000375127 SAMD9Q5K651 1589 aa18.34■□□□□ 0.53
TMCO4-202ENST00000375127 CCNB3Q8WWL7 1395 aa18.33■□□□□ 0.53
TMCO4-202ENST00000375127 LRRIQ1Q96JM4 1722 aa18.31■□□□□ 0.52
TMCO4-202ENST00000375127 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
TMCO4-202ENST00000375127 LRRC9Q6ZRR7 1453 aa18.3■□□□□ 0.52
TMCO4-202ENST00000375127 MAP3K1Q13233 1512 aa18.29■□□□□ 0.52
TMCO4-202ENST00000375127 CEP170Q5SW79 1584 aa18.29■□□□□ 0.52
TMCO4-202ENST00000375127 CASKIN1Q8WXD9 1431 aa18.28■□□□□ 0.52
TMCO4-202ENST00000375127 PHLDB1Q86UU1 1377 aa18.28■□□□□ 0.52
TMCO4-202ENST00000375127 SYNJ2O15056 1496 aa18.27■□□□□ 0.52
TMCO4-202ENST00000375127 MAGI1Q96QZ7 1491 aaPredicted RBP18.27■□□□□ 0.52
TMCO4-202ENST00000375127 FMN1Q68DA7 1419 aa18.27■□□□□ 0.52
TMCO4-202ENST00000375127 FYCO1Q9BQS8 1478 aa18.26■□□□□ 0.51
TMCO4-202ENST00000375127 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
TMCO4-202ENST00000375127 DISP1Q96F81 1524 aa18.23■□□□□ 0.51
TMCO4-202ENST00000375127 FAM50AQ14320 339 aaKnown RBP18.22■□□□□ 0.51
TMCO4-202ENST00000375127 CFAP43Q8NDM7 1665 aa18.22■□□□□ 0.51
TMCO4-202ENST00000375127 JPH4Q96JJ6 628 aa18.2■□□□□ 0.5
TMCO4-202ENST00000375127 CDK13Q14004 1512 aaKnown RBP18.19■□□□□ 0.5
TMCO4-202ENST00000375127 UGGT2Q9NYU1 1516 aa18.18■□□□□ 0.5
TMCO4-202ENST00000375127 MTUS2Q5JR59 1369 aa18.18■□□□□ 0.5
TMCO4-202ENST00000375127 MAGI3Q5TCQ9 1506 aa18.17■□□□□ 0.5
TMCO4-202ENST00000375127 RAB3GAP2Q9H2M9 1393 aa18.17■□□□□ 0.5
TMCO4-202ENST00000375127 KIAA0556O60303 1618 aa18.16■□□□□ 0.5
TMCO4-202ENST00000375127 CHD1O14646 1710 aa18.14■□□□□ 0.5
TMCO4-202ENST00000375127 NUP160Q12769 1436 aa18.14■□□□□ 0.49
TMCO4-202ENST00000375127 PLB1Q6P1J6 1458 aa18.12■□□□□ 0.49
TMCO4-202ENST00000375127 EPRSP07814 1512 aaKnown RBP18.1■□□□□ 0.49
TMCO4-202ENST00000375127 SETD5Q9C0A6 1442 aa18.08■□□□□ 0.49
TMCO4-202ENST00000375127 MAPKBP1O60336 1514 aa18.07■□□□□ 0.48
TMCO4-202ENST00000375127 NUP153P49790 1475 aaKnown RBP18.06■□□□□ 0.48
TMCO4-202ENST00000375127 NCOA2Q15596 1464 aa18.06■□□□□ 0.48
TMCO4-202ENST00000375127 HECW1Q76N89 1606 aa18.05■□□□□ 0.48
TMCO4-202ENST00000375127 PRG4Q92954 1404 aaPredicted RBP18.04■□□□□ 0.48
TMCO4-202ENST00000375127 ERCC6L2Q5T890 1561 aa18.02■□□□□ 0.48
TMCO4-202ENST00000375127 SUPT16HQ9Y5B9 1047 aaKnown RBP18.02■□□□□ 0.47
TMCO4-202ENST00000375127 FGD6Q6ZV73 1430 aa18.01■□□□□ 0.47
TMCO4-202ENST00000375127 RAPGEF6Q8TEU7 1601 aa18.01■□□□□ 0.47
TMCO4-202ENST00000375127 ANP32EQ9BTT0 268 aa18■□□□□ 0.47
TMCO4-202ENST00000375127 CARMIL2Q6F5E8 1435 aa17.99■□□□□ 0.47
TMCO4-202ENST00000375127 SIN3AQ96ST3 1273 aa17.98■□□□□ 0.47
TMCO4-202ENST00000375127 CCDC18Q5T9S5 1454 aa17.98■□□□□ 0.47
TMCO4-202ENST00000375127 SUPT6HQ7KZ85 1726 aaKnown RBP17.98■□□□□ 0.47
TMCO4-202ENST00000375127 CHIC2Q9UKJ5 165 aa17.98■□□□□ 0.47
TMCO4-202ENST00000375127 PTPRKQ15262 1439 aa17.97■□□□□ 0.47
TMCO4-202ENST00000375127 EHBP1L1Q8N3D4 1523 aa17.97■□□□□ 0.47
TMCO4-202ENST00000375127 ZNF644Q9H582 1327 aaPredicted RBP17.96■□□□□ 0.46
TMCO4-202ENST00000375127 BCL11AQ9H165 835 aa17.95■□□□□ 0.46
TMCO4-202ENST00000375127 MYOM3Q5VTT5 1437 aa17.95■□□□□ 0.46
TMCO4-202ENST00000375127 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.95■□□□□ 0.46
TMCO4-202ENST00000375127 TSHZ2Q9NRE2 1034 aa17.94■□□□□ 0.46
TMCO4-202ENST00000375127 PTPRGP23470 1445 aa17.91■□□□□ 0.46
TMCO4-202ENST00000375127 ARHGEF11O15085 1522 aa17.9■□□□□ 0.46
TMCO4-202ENST00000375127 RRP7BPQ9NSQ0 103 aa17.89■□□□□ 0.45
TMCO4-202ENST00000375127 PTPN23Q9H3S7 1636 aa17.88■□□□□ 0.45
TMCO4-202ENST00000375127 ZNF777Q9ULD5 760 aaPredicted RBP17.88■□□□□ 0.45
TMCO4-202ENST00000375127 KIF14Q15058 1648 aa17.88■□□□□ 0.45
TMCO4-202ENST00000375127 ATP10BO94823 1461 aa17.87■□□□□ 0.45
TMCO4-202ENST00000375127 ABCA8O94911 1581 aa17.85■□□□□ 0.45
TMCO4-202ENST00000375127 CDK11AQ9UQ88 783 aaPredicted RBP17.84■□□□□ 0.45
TMCO4-202ENST00000375127 TIMELESSQ9UNS1 1208 aa17.83■□□□□ 0.45
TMCO4-202ENST00000375127 KCNH8Q96L42 1107 aa17.82■□□□□ 0.44
TMCO4-202ENST00000375127 SHROOM2Q13796 1616 aa17.82■□□□□ 0.44
TMCO4-202ENST00000375127 PLEKHD1A6NEE1 506 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms