RNA–Protein interactions for RNA: ENST00000375127.5

TMCO4-202, Transcript of transmembrane and coiled-coil domains 4, humanhuman

TSL 1 (best) BASIC

Gene TMCO4, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-202ENST00000375127 NISCHQ9Y2I1 1504 aa26.77■■□□□ 1.88
TMCO4-202ENST00000375127 CCDC180Q9P1Z9 1646 aa23.01■■□□□ 1.27
TMCO4-202ENST00000375127 DCAF8L2P0C7V8 631 aa22.61■■□□□ 1.21
TMCO4-202ENST00000375127 SHROOM4Q9ULL8 1493 aa22.52■■□□□ 1.2
TMCO4-202ENST00000375127 ZCCHC6Q5VYS8 1495 aaKnown RBP22.48■■□□□ 1.19
TMCO4-202ENST00000375127 ABCC9O60706 1549 aa22.13■■□□□ 1.13
TMCO4-202ENST00000375127 DCAF1Q9Y4B6 1507 aa21.84■■□□□ 1.09
TMCO4-202ENST00000375127 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
TMCO4-202ENST00000375127 SCRIBQ14160 1630 aa21.62■■□□□ 1.05
TMCO4-202ENST00000375127 NACADO15069 1562 aa21.45■■□□□ 1.02
TMCO4-202ENST00000375127 MYO15BQ96JP2 1530 aa21.44■■□□□ 1.02
TMCO4-202ENST00000375127 RB1CC1Q8TDY2 1594 aa21.29■■□□□ 1
TMCO4-202ENST00000375127 UNC13AQ9UPW8 1703 aa21.08■□□□□ 0.96
TMCO4-202ENST00000375127 PABPN1Q86U42 306 aaKnown RBP eCLIP21.07■□□□□ 0.96
TMCO4-202ENST00000375127 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
TMCO4-202ENST00000375127 CECR2Q9BXF3 1484 aa21.04■□□□□ 0.96
TMCO4-202ENST00000375127 RSF1Q96T23 1441 aaPredicted RBP20.94■□□□□ 0.94
TMCO4-202ENST00000375127 MROH2BQ7Z745 1585 aa20.85■□□□□ 0.93
TMCO4-202ENST00000375127 BICRAQ9NZM4 1560 aa20.81■□□□□ 0.92
TMCO4-202ENST00000375127 WIZO95785 1651 aa20.73■□□□□ 0.91
TMCO4-202ENST00000375127 HRCP23327 699 aa20.73■□□□□ 0.91
TMCO4-202ENST00000375127 BAZ1AQ9NRL2 1556 aaPredicted RBP20.58■□□□□ 0.88
TMCO4-202ENST00000375127 SMARCA4P51532 1647 aa20.54■□□□□ 0.88
TMCO4-202ENST00000375127 LOC105371045A0A1W2PR82 267 aa20.44■□□□□ 0.86
TMCO4-202ENST00000375127 PCGF6Q9BYE7 350 aa20.37■□□□□ 0.85
TMCO4-202ENST00000375127 TOP2AP11388 1531 aaKnown RBP20.26■□□□□ 0.83
TMCO4-202ENST00000375127 PELP1Q8IZL8 1130 aaKnown RBP20.24■□□□□ 0.83
TMCO4-202ENST00000375127 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
TMCO4-202ENST00000375127 ATAD2BQ9ULI0 1458 aa20.2■□□□□ 0.82
TMCO4-202ENST00000375127 SMARCA2P51531 1590 aa20.18■□□□□ 0.82
TMCO4-202ENST00000375127 TRIM41Q8WV44 630 aa20.18■□□□□ 0.82
TMCO4-202ENST00000375127 EIF4G1Q04637 1599 aaKnown RBP20.15■□□□□ 0.82
TMCO4-202ENST00000375127 FAM9AQ8IZU1 332 aaPredicted RBP20.13■□□□□ 0.81
TMCO4-202ENST00000375127 PEG3Q9GZU2 1588 aa20.11■□□□□ 0.81
TMCO4-202ENST00000375127 BAZ1BQ9UIG0 1483 aaKnown RBP20.1■□□□□ 0.81
TMCO4-202ENST00000375127 EHMT2Q96KQ7 1210 aa20.1■□□□□ 0.81
TMCO4-202ENST00000375127 PPARGC1BQ86YN6 1023 aaKnown RBP20.08■□□□□ 0.81
TMCO4-202ENST00000375127 ABCC8Q09428 1581 aa20.03■□□□□ 0.8
TMCO4-202ENST00000375127 TRIM26Q12899 539 aaPredicted RBP19.97■□□□□ 0.79
TMCO4-202ENST00000375127 NCAPD3P42695 1498 aa19.88■□□□□ 0.77
TMCO4-202ENST00000375127 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
TMCO4-202ENST00000375127 DNAJC5BQ9UF47 199 aa19.79■□□□□ 0.76
TMCO4-202ENST00000375127 HMGXB3Q12766 1538 aa19.79■□□□□ 0.76
TMCO4-202ENST00000375127 SOGA1O94964 1423 aa19.68■□□□□ 0.74
TMCO4-202ENST00000375127 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
TMCO4-202ENST00000375127 RUSC2Q8N2Y8 1516 aa19.67■□□□□ 0.74
TMCO4-202ENST00000375127 SYNJ1O43426 1573 aa19.66■□□□□ 0.74
TMCO4-202ENST00000375127 MYT1Q01538 1121 aa19.64■□□□□ 0.74
TMCO4-202ENST00000375127 ZEB1P37275 1124 aaPredicted RBP19.62■□□□□ 0.73
TMCO4-202ENST00000375127 CFTRP13569 1480 aa19.54■□□□□ 0.72
TMCO4-202ENST00000375127 NESP48681 1621 aa19.52■□□□□ 0.72
TMCO4-202ENST00000375127 SCAF1Q9H7N4 1312 aaKnown RBP19.5■□□□□ 0.71
TMCO4-202ENST00000375127 CADPSQ9ULU8 1353 aa19.48■□□□□ 0.71
TMCO4-202ENST00000375127 CUX1P39880 1505 aa19.44■□□□□ 0.7
TMCO4-202ENST00000375127 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
TMCO4-202ENST00000375127 TOP2BQ02880 1626 aa19.4■□□□□ 0.7
TMCO4-202ENST00000375127 UBTFP17480 764 aaKnown RBP19.35■□□□□ 0.69
TMCO4-202ENST00000375127 RANGAP1P46060 587 aaPredicted RBP19.33■□□□□ 0.69
TMCO4-202ENST00000375127 EEA1Q15075 1411 aa19.33■□□□□ 0.68
TMCO4-202ENST00000375127 BIVM-ERCC5R4GMW8 1640 aa19.33■□□□□ 0.68
TMCO4-202ENST00000375127 PRDM2Q13029 1718 aa19.32■□□□□ 0.68
TMCO4-202ENST00000375127 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
TMCO4-202ENST00000375127 CEP162Q5TB80 1403 aa19.28■□□□□ 0.68
TMCO4-202ENST00000375127 TNIKQ9UKE5 1360 aa19.25■□□□□ 0.67
TMCO4-202ENST00000375127 TTBK1Q5TCY1 1321 aaPredicted RBP19.22■□□□□ 0.67
TMCO4-202ENST00000375127 RAPGEF2Q9Y4G8 1499 aa19.21■□□□□ 0.67
TMCO4-202ENST00000375127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.21■□□□□ 0.67
TMCO4-202ENST00000375127 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
TMCO4-202ENST00000375127 GOLGA3Q08378 1498 aa19.16■□□□□ 0.66
TMCO4-202ENST00000375127 RAD54L2Q9Y4B4 1467 aa19.16■□□□□ 0.66
TMCO4-202ENST00000375127 LAMC3Q9Y6N6 1575 aa19.14■□□□□ 0.65
TMCO4-202ENST00000375127 CUX2O14529 1486 aa19.13■□□□□ 0.65
TMCO4-202ENST00000375127 CCER1Q8TC90 406 aaPredicted RBP19.13■□□□□ 0.65
TMCO4-202ENST00000375127 KIF21AQ7Z4S6 1674 aa19.13■□□□□ 0.65
TMCO4-202ENST00000375127 CEP164Q9UPV0 1460 aa19.12■□□□□ 0.65
TMCO4-202ENST00000375127 ACIN1Q9UKV3 1341 aaKnown RBP19.11■□□□□ 0.65
TMCO4-202ENST00000375127 TOPBP1Q92547 1522 aa19.11■□□□□ 0.65
TMCO4-202ENST00000375127 URB2Q14146 1524 aaKnown RBP19.1■□□□□ 0.65
TMCO4-202ENST00000375127 KIF27Q86VH2 1401 aa19.09■□□□□ 0.65
TMCO4-202ENST00000375127 KIF21BO75037 1637 aa19.08■□□□□ 0.64
TMCO4-202ENST00000375127 POLA1P09884 1462 aaPredicted RBP19.07■□□□□ 0.64
TMCO4-202ENST00000375127 PDS5BQ9NTI5 1447 aa19.05■□□□□ 0.64
TMCO4-202ENST00000375127 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
TMCO4-202ENST00000375127 PRXQ9BXM0 1461 aa19.02■□□□□ 0.63
TMCO4-202ENST00000375127 IGF1RP08069 1367 aa19.01■□□□□ 0.63
TMCO4-202ENST00000375127 TDRD9Q8NDG6 1382 aaKnown RBP18.98■□□□□ 0.63
TMCO4-202ENST00000375127 NEUROD1Q13562 356 aa18.98■□□□□ 0.63
TMCO4-202ENST00000375127 CLIP1P30622 1438 aa18.96■□□□□ 0.63
TMCO4-202ENST00000375127 CARMIL1Q5VZK9 1371 aa18.91■□□□□ 0.62
TMCO4-202ENST00000375127 CENPBP07199 599 aaPredicted RBP18.89■□□□□ 0.61
TMCO4-202ENST00000375127 ABCA10Q8WWZ4 1543 aa18.89■□□□□ 0.61
TMCO4-202ENST00000375127 ERICH3Q5RHP9 1530 aa18.88■□□□□ 0.61
TMCO4-202ENST00000375127 GTF3C3Q9Y5Q9 886 aa18.86■□□□□ 0.61
TMCO4-202ENST00000375127 ERCC6Q03468 1493 aa18.83■□□□□ 0.61
TMCO4-202ENST00000375127 VPS8Q8N3P4 1428 aa18.83■□□□□ 0.61
TMCO4-202ENST00000375127 P3H3Q8IVL6 736 aa18.82■□□□□ 0.6
TMCO4-202ENST00000375127 AQRO60306 1485 aaKnown RBP eCLIP18.81■□□□□ 0.6
TMCO4-202ENST00000375127 MRC2Q9UBG0 1479 aa18.81■□□□□ 0.6
TMCO4-202ENST00000375127 WDR97A6NE52 1622 aa18.8■□□□□ 0.6
TMCO4-202ENST00000375127 ARAP1Q96P48 1450 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms