RNA–Protein interactions for RNA: ENST00000374602.2

TCEA3-202, Transcript of transcription elongation factor A3, humanhuman

TSL 3

Gene TCEA3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-202ENST00000374602 ERCC6L2Q5T890 1561 aa11.59□□□□□ -0.55
TCEA3-202ENST00000374602 FHAD1B1AJZ9 1412 aa11.59□□□□□ -0.55
TCEA3-202ENST00000374602 RUSC2Q8N2Y8 1516 aa11.52□□□□□ -0.57
TCEA3-202ENST00000374602 PRG4Q92954 1404 aaPredicted RBP11.5□□□□□ -0.57
TCEA3-202ENST00000374602 SUPT5HO00267 1087 aaKnown RBP11.48□□□□□ -0.57
TCEA3-202ENST00000374602 MAPKBP1O60336 1514 aa11.48□□□□□ -0.57
TCEA3-202ENST00000374602 NPM1P06748 294 aaKnown RBP eCLIP11.47□□□□□ -0.57
TCEA3-202ENST00000374602 CUL7Q14999 1698 aa11.46□□□□□ -0.57
TCEA3-202ENST00000374602 DIP2BQ9P265 1576 aa11.46□□□□□ -0.57
TCEA3-202ENST00000374602 KDM6BO15054 1643 aa11.46□□□□□ -0.58
TCEA3-202ENST00000374602 ABCC10Q5T3U5 1492 aa11.44□□□□□ -0.58
TCEA3-202ENST00000374602 TSPOAP1O95153 1857 aa11.44□□□□□ -0.58
TCEA3-202ENST00000374602 ADCY10Q96PN6 1610 aa11.44□□□□□ -0.58
TCEA3-202ENST00000374602 JPH4Q96JJ6 628 aa11.43□□□□□ -0.58
TCEA3-202ENST00000374602 FAM69CQ0P6D2 419 aa11.4□□□□□ -0.58
TCEA3-202ENST00000374602 KIAA0586Q9BVV6 1533 aa11.38□□□□□ -0.59
TCEA3-202ENST00000374602 KIF27Q86VH2 1401 aa11.35□□□□□ -0.59
TCEA3-202ENST00000374602 CARMIL2Q6F5E8 1435 aa11.33□□□□□ -0.6
TCEA3-202ENST00000374602 IQGAP2Q13576 1575 aa11.32□□□□□ -0.6
TCEA3-202ENST00000374602 ABCC2Q92887 1545 aa11.3□□□□□ -0.6
TCEA3-202ENST00000374602 PTPRGP23470 1445 aa11.29□□□□□ -0.6
TCEA3-202ENST00000374602 PLB1Q6P1J6 1458 aa11.29□□□□□ -0.6
TCEA3-202ENST00000374602 GLI2P10070 1586 aa11.28□□□□□ -0.6
TCEA3-202ENST00000374602 ADRA2BP18089 450 aa11.28□□□□□ -0.6
TCEA3-202ENST00000374602 PPP6R1Q9UPN7 881 aa11.28□□□□□ -0.6
TCEA3-202ENST00000374602 TNIKQ9UKE5 1360 aa11.28□□□□□ -0.6
TCEA3-202ENST00000374602 IGF1RP08069 1367 aa11.27□□□□□ -0.61
TCEA3-202ENST00000374602 PPRC1Q5VV67 1664 aaKnown RBP11.27□□□□□ -0.61
TCEA3-202ENST00000374602 TEX14Q8IWB6 1497 aa11.25□□□□□ -0.61
TCEA3-202ENST00000374602 ASXL2Q76L83 1435 aa11.25□□□□□ -0.61
TCEA3-202ENST00000374602 TTBK1Q5TCY1 1321 aaPredicted RBP11.24□□□□□ -0.61
TCEA3-202ENST00000374602 CARMIL1Q5VZK9 1371 aa11.24□□□□□ -0.61
TCEA3-202ENST00000374602 UHRF1BP1LA0JNW5 1464 aa11.24□□□□□ -0.61
TCEA3-202ENST00000374602 MAP3K4Q9Y6R4 1608 aa11.24□□□□□ -0.61
TCEA3-202ENST00000374602 ADGRL1O94910 1474 aa11.22□□□□□ -0.61
TCEA3-202ENST00000374602 ZCCHC11Q5TAX3 1644 aaKnown RBP11.22□□□□□ -0.61
TCEA3-202ENST00000374602 UACAQ9BZF9 1416 aa11.22□□□□□ -0.61
TCEA3-202ENST00000374602 CTTNBP2Q8WZ74 1663 aa11.21□□□□□ -0.61
TCEA3-202ENST00000374602 KDM4FA0A1W2PPD8 638 aa11.21□□□□□ -0.61
TCEA3-202ENST00000374602 KIAA0556O60303 1618 aa11.2□□□□□ -0.62
TCEA3-202ENST00000374602 EPRSP07814 1512 aaKnown RBP11.19□□□□□ -0.62
TCEA3-202ENST00000374602 UGGT2Q9NYU1 1516 aa11.19□□□□□ -0.62
TCEA3-202ENST00000374602 KDM5BQ9UGL1 1544 aa11.19□□□□□ -0.62
TCEA3-202ENST00000374602 DISP1Q96F81 1524 aa11.18□□□□□ -0.62
TCEA3-202ENST00000374602 CFAP43Q8NDM7 1665 aa11.17□□□□□ -0.62
TCEA3-202ENST00000374602 RAPGEF2Q9Y4G8 1499 aa11.17□□□□□ -0.62
TCEA3-202ENST00000374602 HECW2Q9P2P5 1572 aa11.16□□□□□ -0.62
TCEA3-202ENST00000374602 WDR7Q9Y4E6 1490 aa11.15□□□□□ -0.62
TCEA3-202ENST00000374602 GOLGA3Q08378 1498 aa11.13□□□□□ -0.63
TCEA3-202ENST00000374602 ILDR1Q86SU0 546 aaPredicted RBP11.09□□□□□ -0.63
TCEA3-202ENST00000374602 MAGI3Q5TCQ9 1506 aa11.09□□□□□ -0.63
TCEA3-202ENST00000374602 FAM9AQ8IZU1 332 aaPredicted RBP11.08□□□□□ -0.64
TCEA3-202ENST00000374602 KIF21BO75037 1637 aa11.08□□□□□ -0.64
TCEA3-202ENST00000374602 COL17A1Q9UMD9 1497 aaPredicted RBP11.07□□□□□ -0.64
TCEA3-202ENST00000374602 CD109Q6YHK3 1445 aa11.07□□□□□ -0.64
TCEA3-202ENST00000374602 ABCA8O94911 1581 aa11.07□□□□□ -0.64
TCEA3-202ENST00000374602 PIAS4Q8N2W9 510 aaPredicted RBP11.02□□□□□ -0.65
TCEA3-202ENST00000374602 ABCA9Q8IUA7 1624 aa11.01□□□□□ -0.65
TCEA3-202ENST00000374602 ARAP3Q8WWN8 1544 aa10.99□□□□□ -0.65
TCEA3-202ENST00000374602 KCNH8Q96L42 1107 aa10.99□□□□□ -0.65
TCEA3-202ENST00000374602 PHLDB1Q86UU1 1377 aa10.98□□□□□ -0.65
TCEA3-202ENST00000374602 CFAP74Q9C0B2 1584 aa10.98□□□□□ -0.65
TCEA3-202ENST00000374602 RAPGEF6Q8TEU7 1601 aa10.98□□□□□ -0.65
TCEA3-202ENST00000374602 ADAMTSL3P82987 1691 aa10.96□□□□□ -0.65
TCEA3-202ENST00000374602 BCORL1Q5H9F3 1711 aa10.95□□□□□ -0.66
TCEA3-202ENST00000374602 NEO1Q92859 1461 aa10.95□□□□□ -0.66
TCEA3-202ENST00000374602 PRXQ9BXM0 1461 aa10.95□□□□□ -0.66
TCEA3-202ENST00000374602 SAMD9Q5K651 1589 aa10.94□□□□□ -0.66
TCEA3-202ENST00000374602 ARHGEF40Q8TER5 1519 aa10.94□□□□□ -0.66
TCEA3-202ENST00000374602 PTPRMP28827 1452 aa10.93□□□□□ -0.66
TCEA3-202ENST00000374602 MADDQ8WXG6 1647 aa10.92□□□□□ -0.66
TCEA3-202ENST00000374602 PCF11O94913 1555 aaKnown RBP10.92□□□□□ -0.66
TCEA3-202ENST00000374602 RIMS1Q86UR5 1692 aaKnown RBP10.92□□□□□ -0.66
TCEA3-202ENST00000374602 ATP10BO94823 1461 aa10.91□□□□□ -0.66
TCEA3-202ENST00000374602 FRMPD1Q5SYB0 1578 aa10.9□□□□□ -0.66
TCEA3-202ENST00000374602 RICTORQ6R327 1708 aa10.9□□□□□ -0.66
TCEA3-202ENST00000374602 ARID3CA6NKF2 412 aa10.9□□□□□ -0.66
TCEA3-202ENST00000374602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.9□□□□□ -0.66
TCEA3-202ENST00000374602 HNRNPUL2Q1KMD3 747 aaKnown RBP10.9□□□□□ -0.66
TCEA3-202ENST00000374602 FBXO41Q8TF61 875 aa10.9□□□□□ -0.66
TCEA3-202ENST00000374602 ARID4BQ4LE39 1312 aaPredicted RBP10.89□□□□□ -0.67
TCEA3-202ENST00000374602 POGZQ7Z3K3 1410 aa10.88□□□□□ -0.67
TCEA3-202ENST00000374602 EFCAB5A4FU69 1503 aa10.88□□□□□ -0.67
TCEA3-202ENST00000374602 FER1L4A9Z1Z3 1794 aa10.88□□□□□ -0.67
TCEA3-202ENST00000374602 FANCAO15360 1455 aa10.87□□□□□ -0.67
TCEA3-202ENST00000374602 P3H3Q8IVL6 736 aa10.86□□□□□ -0.67
TCEA3-202ENST00000374602 DENND4BO75064 1496 aaPredicted RBP10.86□□□□□ -0.67
TCEA3-202ENST00000374602 ZMYM4Q5VZL5 1548 aa10.85□□□□□ -0.67
TCEA3-202ENST00000374602 NUP153P49790 1475 aaKnown RBP10.85□□□□□ -0.67
TCEA3-202ENST00000374602 LMTK3Q96Q04 1460 aa10.85□□□□□ -0.67
TCEA3-202ENST00000374602 EEA1Q15075 1411 aa10.84□□□□□ -0.67
TCEA3-202ENST00000374602 AKNAQ7Z591 1439 aa10.84□□□□□ -0.67
TCEA3-202ENST00000374602 ZFYVE16Q7Z3T8 1539 aa10.84□□□□□ -0.67
TCEA3-202ENST00000374602 RAPGEF3O95398 923 aa10.84□□□□□ -0.67
TCEA3-202ENST00000374602 TTC37Q6PGP7 1564 aa10.82□□□□□ -0.68
TCEA3-202ENST00000374602 MYO5CQ9NQX4 1742 aa10.82□□□□□ -0.68
TCEA3-202ENST00000374602 PLEKHD1A6NEE1 506 aa10.81□□□□□ -0.68
TCEA3-202ENST00000374602 FHOD3Q2V2M9 1422 aa10.81□□□□□ -0.68
TCEA3-202ENST00000374602 MAGI2Q86UL8 1455 aa10.81□□□□□ -0.68
TCEA3-202ENST00000374602 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms