RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 RIMBP3Q9UFD9 1639 aa26.62■■□□□ 1.85
HDHD3-202ENST00000374180 JPH4Q96JJ6 628 aa26.57■■□□□ 1.84
HDHD3-202ENST00000374180 PRXQ9BXM0 1461 aa26.56■■□□□ 1.84
HDHD3-202ENST00000374180 KIAA0586Q9BVV6 1533 aa26.55■■□□□ 1.84
HDHD3-202ENST00000374180 CYB5RLQ6IPT4 315 aa26.51■■□□□ 1.83
HDHD3-202ENST00000374180 SHROOM2Q13796 1616 aa26.48■■□□□ 1.83
HDHD3-202ENST00000374180 PRG4Q92954 1404 aaPredicted RBP26.46■■□□□ 1.83
HDHD3-202ENST00000374180 ARAP1Q96P48 1450 aa26.45■■□□□ 1.82
HDHD3-202ENST00000374180 ERCC6L2Q5T890 1561 aa26.42■■□□□ 1.82
HDHD3-202ENST00000374180 IQGAP2Q13576 1575 aa26.38■■□□□ 1.81
HDHD3-202ENST00000374180 CARMIL2Q6F5E8 1435 aa26.3■■□□□ 1.8
HDHD3-202ENST00000374180 KIF21BO75037 1637 aa26.29■■□□□ 1.8
HDHD3-202ENST00000374180 CTTNBP2Q8WZ74 1663 aa26.28■■□□□ 1.8
HDHD3-202ENST00000374180 EHMT2Q96KQ7 1210 aa26.28■■□□□ 1.8
HDHD3-202ENST00000374180 UGGT2Q9NYU1 1516 aa26.25■■□□□ 1.79
HDHD3-202ENST00000374180 UBTFP17480 764 aaKnown RBP26.23■■□□□ 1.79
HDHD3-202ENST00000374180 DISP1Q96F81 1524 aa26.21■■□□□ 1.79
HDHD3-202ENST00000374180 TTBK1Q5TCY1 1321 aaPredicted RBP26.2■■□□□ 1.78
HDHD3-202ENST00000374180 TNIKQ9UKE5 1360 aa26.19■■□□□ 1.78
HDHD3-202ENST00000374180 GOLGA3Q08378 1498 aa26.19■■□□□ 1.78
HDHD3-202ENST00000374180 PTPRGP23470 1445 aa26.18■■□□□ 1.78
HDHD3-202ENST00000374180 RANGAP1P46060 587 aaPredicted RBP26.13■■□□□ 1.77
HDHD3-202ENST00000374180 KIAA0556O60303 1618 aa26.11■■□□□ 1.77
HDHD3-202ENST00000374180 P3H3Q8IVL6 736 aa26.08■■□□□ 1.77
HDHD3-202ENST00000374180 NPM1P06748 294 aaKnown RBP eCLIP26.03■■□□□ 1.76
HDHD3-202ENST00000374180 UACAQ9BZF9 1416 aa25.98■■□□□ 1.75
HDHD3-202ENST00000374180 SAMD9Q5K651 1589 aa25.98■■□□□ 1.75
HDHD3-202ENST00000374180 ADCY10Q96PN6 1610 aa25.97■■□□□ 1.75
HDHD3-202ENST00000374180 TRHP20396 242 aaPredicted RBP25.95■■□□□ 1.74
HDHD3-202ENST00000374180 UHRF1BP1LA0JNW5 1464 aa25.92■■□□□ 1.74
HDHD3-202ENST00000374180 EFCAB5A4FU69 1503 aa25.91■■□□□ 1.74
HDHD3-202ENST00000374180 PLB1Q6P1J6 1458 aa25.9■■□□□ 1.74
HDHD3-202ENST00000374180 FHOD3Q2V2M9 1422 aa25.89■■□□□ 1.74
HDHD3-202ENST00000374180 ABCC2Q92887 1545 aa25.89■■□□□ 1.73
HDHD3-202ENST00000374180 LOC105371045A0A1W2PR82 267 aa25.85■■□□□ 1.73
HDHD3-202ENST00000374180 ARHGAP35Q9NRY4 1499 aa25.83■■□□□ 1.73
HDHD3-202ENST00000374180 ABCA8O94911 1581 aa25.83■■□□□ 1.73
HDHD3-202ENST00000374180 KDM5BQ9UGL1 1544 aa25.79■■□□□ 1.72
HDHD3-202ENST00000374180 MAPKBP1O60336 1514 aa25.79■■□□□ 1.72
HDHD3-202ENST00000374180 CLIP1P30622 1438 aa25.75■■□□□ 1.71
HDHD3-202ENST00000374180 ARID3CA6NKF2 412 aa25.74■■□□□ 1.71
HDHD3-202ENST00000374180 FMN1Q68DA7 1419 aa25.73■■□□□ 1.71
HDHD3-202ENST00000374180 ASXL2Q76L83 1435 aa25.72■■□□□ 1.71
HDHD3-202ENST00000374180 RAPGEF6Q8TEU7 1601 aa25.72■■□□□ 1.71
HDHD3-202ENST00000374180 FAM69CQ0P6D2 419 aa25.71■■□□□ 1.71
HDHD3-202ENST00000374180 ZCCHC11Q5TAX3 1644 aaKnown RBP25.7■■□□□ 1.71
HDHD3-202ENST00000374180 ABCC10Q5T3U5 1492 aa25.69■■□□□ 1.7
HDHD3-202ENST00000374180 ATP10BO94823 1461 aa25.67■■□□□ 1.7
HDHD3-202ENST00000374180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.67■■□□□ 1.7
HDHD3-202ENST00000374180 HNRNPUL2Q1KMD3 747 aaKnown RBP25.67■■□□□ 1.7
HDHD3-202ENST00000374180 ATP1B4Q9UN42 357 aaPredicted RBP25.67■■□□□ 1.7
HDHD3-202ENST00000374180 CEP162Q5TB80 1403 aa25.65■■□□□ 1.7
HDHD3-202ENST00000374180 NUP153P49790 1475 aaKnown RBP25.65■■□□□ 1.7
HDHD3-202ENST00000374180 WDR7Q9Y4E6 1490 aa25.6■■□□□ 1.69
HDHD3-202ENST00000374180 DIP2BQ9P265 1576 aa25.6■■□□□ 1.69
HDHD3-202ENST00000374180 KCNH8Q96L42 1107 aa25.59■■□□□ 1.69
HDHD3-202ENST00000374180 KIF13AQ9H1H9 1805 aa25.58■■□□□ 1.69
HDHD3-202ENST00000374180 EPRSP07814 1512 aaKnown RBP25.55■■□□□ 1.68
HDHD3-202ENST00000374180 PLEKHD1A6NEE1 506 aa25.53■■□□□ 1.68
HDHD3-202ENST00000374180 HECW1Q76N89 1606 aa25.53■■□□□ 1.68
HDHD3-202ENST00000374180 CASKIN1Q8WXD9 1431 aa25.52■■□□□ 1.68
HDHD3-202ENST00000374180 GLI2P10070 1586 aa25.5■■□□□ 1.67
HDHD3-202ENST00000374180 CDK13Q14004 1512 aaKnown RBP25.48■■□□□ 1.67
HDHD3-202ENST00000374180 CDK11AQ9UQ88 783 aaPredicted RBP25.47■■□□□ 1.67
HDHD3-202ENST00000374180 PCF11O94913 1555 aaKnown RBP25.46■■□□□ 1.67
HDHD3-202ENST00000374180 FYCO1Q9BQS8 1478 aa25.45■■□□□ 1.66
HDHD3-202ENST00000374180 TSPOAP1O95153 1857 aa25.4■■□□□ 1.66
HDHD3-202ENST00000374180 CCDC18Q5T9S5 1454 aa25.4■■□□□ 1.66
HDHD3-202ENST00000374180 CD109Q6YHK3 1445 aa25.39■■□□□ 1.66
HDHD3-202ENST00000374180 MAP3K4Q9Y6R4 1608 aa25.37■■□□□ 1.65
HDHD3-202ENST00000374180 LRRIQ1Q96JM4 1722 aa25.35■■□□□ 1.65
HDHD3-202ENST00000374180 VPS8Q8N3P4 1428 aa25.33■■□□□ 1.65
HDHD3-202ENST00000374180 CFAP43Q8NDM7 1665 aa25.32■■□□□ 1.64
HDHD3-202ENST00000374180 TROQ12816 1431 aaPredicted RBP25.31■■□□□ 1.64
HDHD3-202ENST00000374180 TEX14Q8IWB6 1497 aa25.3■■□□□ 1.64
HDHD3-202ENST00000374180 ABCA9Q8IUA7 1624 aa25.3■■□□□ 1.64
HDHD3-202ENST00000374180 MAGI3Q5TCQ9 1506 aa25.29■■□□□ 1.64
HDHD3-202ENST00000374180 PPRC1Q5VV67 1664 aaKnown RBP25.28■■□□□ 1.64
HDHD3-202ENST00000374180 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.25■■□□□ 1.63
HDHD3-202ENST00000374180 MTUS2Q5JR59 1369 aa25.21■■□□□ 1.63
HDHD3-202ENST00000374180 KIF14Q15058 1648 aa25.2■■□□□ 1.62
HDHD3-202ENST00000374180 TTC37Q6PGP7 1564 aa25.18■■□□□ 1.62
HDHD3-202ENST00000374180 KDM6BO15054 1643 aa25.18■■□□□ 1.62
HDHD3-202ENST00000374180 PHLDB1Q86UU1 1377 aa25.15■■□□□ 1.62
HDHD3-202ENST00000374180 PLCH2O75038 1416 aa25.15■■□□□ 1.62
HDHD3-202ENST00000374180 APLP2Q06481 763 aa25.15■■□□□ 1.62
HDHD3-202ENST00000374180 NEO1Q92859 1461 aa25.12■■□□□ 1.61
HDHD3-202ENST00000374180 COL17A1Q9UMD9 1497 aaPredicted RBP25.12■■□□□ 1.61
HDHD3-202ENST00000374180 FANCAO15360 1455 aa25.11■■□□□ 1.61
HDHD3-202ENST00000374180 TIAM1Q13009 1591 aa25.11■■□□□ 1.61
HDHD3-202ENST00000374180 EFCAB2Q5VUJ9 269 aa25.1■■□□□ 1.61
HDHD3-202ENST00000374180 MAP3K1Q13233 1512 aa25.08■■□□□ 1.61
HDHD3-202ENST00000374180 EHBP1L1Q8N3D4 1523 aa25.08■■□□□ 1.61
HDHD3-202ENST00000374180 ARAP3Q8WWN8 1544 aa25.07■■□□□ 1.6
HDHD3-202ENST00000374180 AKNAQ7Z591 1439 aa25.07■■□□□ 1.6
HDHD3-202ENST00000374180 MYO5CQ9NQX4 1742 aa25.06■■□□□ 1.6
HDHD3-202ENST00000374180 KANK4Q5T7N3 995 aaPredicted RBP25.05■■□□□ 1.6
HDHD3-202ENST00000374180 LRRC9Q6ZRR7 1453 aa25.04■■□□□ 1.6
HDHD3-202ENST00000374180 CCNB3Q8WWL7 1395 aa25.03■■□□□ 1.6
HDHD3-202ENST00000374180 CFAP74Q9C0B2 1584 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms