RNA–Protein interactions for RNA: ENST00000374017.3

SNRPC-202, Transcript of small nuclear ribonucleoprotein polypeptide C, humanhuman

TSL 2 BASIC

Gene SNRPC, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPC-202ENST00000374017 GRIN2AQ12879 1464 aa22.86■■□□□ 1.25
SNRPC-202ENST00000374017 VPS8Q8N3P4 1428 aa22.85■■□□□ 1.25
SNRPC-202ENST00000374017 CHMP7Q8WUX9 453 aaPredicted RBP22.82■■□□□ 1.24
SNRPC-202ENST00000374017 ARHGAP35Q9NRY4 1499 aa22.81■■□□□ 1.24
SNRPC-202ENST00000374017 IQGAP2Q13576 1575 aa22.78■■□□□ 1.24
SNRPC-202ENST00000374017 ARAP1Q96P48 1450 aa22.78■■□□□ 1.24
SNRPC-202ENST00000374017 KIAA0586Q9BVV6 1533 aa22.77■■□□□ 1.24
SNRPC-202ENST00000374017 RANGAP1P46060 587 aaPredicted RBP22.77■■□□□ 1.24
SNRPC-202ENST00000374017 NUP160Q12769 1436 aa22.73■■□□□ 1.23
SNRPC-202ENST00000374017 SAMD9Q5K651 1589 aa22.72■■□□□ 1.23
SNRPC-202ENST00000374017 UGGT2Q9NYU1 1516 aa22.68■■□□□ 1.22
SNRPC-202ENST00000374017 FBLN2P98095 1184 aa22.68■■□□□ 1.22
SNRPC-202ENST00000374017 APLP2Q06481 763 aa22.68■■□□□ 1.22
SNRPC-202ENST00000374017 FMN1Q68DA7 1419 aa22.66■■□□□ 1.22
SNRPC-202ENST00000374017 CEP170Q5SW79 1584 aa22.65■■□□□ 1.22
SNRPC-202ENST00000374017 FHOD3Q2V2M9 1422 aa22.59■■□□□ 1.21
SNRPC-202ENST00000374017 CHD1O14646 1710 aa22.58■■□□□ 1.21
SNRPC-202ENST00000374017 FYCO1Q9BQS8 1478 aa22.56■■□□□ 1.2
SNRPC-202ENST00000374017 TRIM26Q12899 539 aaPredicted RBP22.56■■□□□ 1.2
SNRPC-202ENST00000374017 MAP3K1Q13233 1512 aa22.56■■□□□ 1.2
SNRPC-202ENST00000374017 CARMIL2Q6F5E8 1435 aa22.55■■□□□ 1.2
SNRPC-202ENST00000374017 CASKIN1Q8WXD9 1431 aa22.54■■□□□ 1.2
SNRPC-202ENST00000374017 KIAA0556O60303 1618 aa22.53■■□□□ 1.2
SNRPC-202ENST00000374017 P3H3Q8IVL6 736 aa22.52■■□□□ 1.2
SNRPC-202ENST00000374017 DISP1Q96F81 1524 aa22.5■■□□□ 1.19
SNRPC-202ENST00000374017 PCF11O94913 1555 aaKnown RBP22.49■■□□□ 1.19
SNRPC-202ENST00000374017 JPH4Q96JJ6 628 aa22.48■■□□□ 1.19
SNRPC-202ENST00000374017 TIAM1Q13009 1591 aa22.43■■□□□ 1.18
SNRPC-202ENST00000374017 SHROOM2Q13796 1616 aa22.41■■□□□ 1.18
SNRPC-202ENST00000374017 HECW1Q76N89 1606 aa22.41■■□□□ 1.18
SNRPC-202ENST00000374017 CFAP43Q8NDM7 1665 aa22.4■■□□□ 1.18
SNRPC-202ENST00000374017 CLASP1Q7Z460 1538 aa22.4■■□□□ 1.18
SNRPC-202ENST00000374017 CCDC18Q5T9S5 1454 aa22.4■■□□□ 1.18
SNRPC-202ENST00000374017 PCGF6Q9BYE7 350 aa22.36■■□□□ 1.17
SNRPC-202ENST00000374017 PRG4Q92954 1404 aaPredicted RBP22.36■■□□□ 1.17
SNRPC-202ENST00000374017 PPARGC1BQ86YN6 1023 aaKnown RBP22.35■■□□□ 1.17
SNRPC-202ENST00000374017 ATP1B4Q9UN42 357 aaPredicted RBP22.33■■□□□ 1.17
SNRPC-202ENST00000374017 LRRC9Q6ZRR7 1453 aa22.32■■□□□ 1.16
SNRPC-202ENST00000374017 RAPGEF6Q8TEU7 1601 aa22.3■■□□□ 1.16
SNRPC-202ENST00000374017 KANK4Q5T7N3 995 aaPredicted RBP22.26■■□□□ 1.15
SNRPC-202ENST00000374017 EPRSP07814 1512 aaKnown RBP22.26■■□□□ 1.15
SNRPC-202ENST00000374017 OSCARQ8IYS5 282 aa22.25■■□□□ 1.15
SNRPC-202ENST00000374017 PTPRGP23470 1445 aa22.24■■□□□ 1.15
SNRPC-202ENST00000374017 EHBP1L1Q8N3D4 1523 aa22.23■■□□□ 1.15
SNRPC-202ENST00000374017 TTBK1Q5TCY1 1321 aaPredicted RBP22.23■■□□□ 1.15
SNRPC-202ENST00000374017 MTUS2Q5JR59 1369 aa22.23■■□□□ 1.15
SNRPC-202ENST00000374017 NUP153P49790 1475 aaKnown RBP22.21■■□□□ 1.15
SNRPC-202ENST00000374017 ABCA8O94911 1581 aa22.21■■□□□ 1.15
SNRPC-202ENST00000374017 CDK11AQ9UQ88 783 aaPredicted RBP22.2■■□□□ 1.14
SNRPC-202ENST00000374017 LRRIQ1Q96JM4 1722 aa22.17■■□□□ 1.14
SNRPC-202ENST00000374017 PLB1Q6P1J6 1458 aa22.17■■□□□ 1.14
SNRPC-202ENST00000374017 RRBP1Q9P2E9 1410 aaKnown RBP22.14■■□□□ 1.14
SNRPC-202ENST00000374017 UACAQ9BZF9 1416 aa22.14■■□□□ 1.13
SNRPC-202ENST00000374017 SUPT6HQ7KZ85 1726 aaKnown RBP22.13■■□□□ 1.13
SNRPC-202ENST00000374017 CDK13Q14004 1512 aaKnown RBP22.11■■□□□ 1.13
SNRPC-202ENST00000374017 ABCC2Q92887 1545 aa22.08■■□□□ 1.13
SNRPC-202ENST00000374017 UHRF1BP1LA0JNW5 1464 aa22.08■■□□□ 1.12
SNRPC-202ENST00000374017 ERCC6L2Q5T890 1561 aa22.08■■□□□ 1.12
SNRPC-202ENST00000374017 CCNB3Q8WWL7 1395 aa22.07■■□□□ 1.12
SNRPC-202ENST00000374017 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.06■■□□□ 1.12
SNRPC-202ENST00000374017 HNRNPUL2Q1KMD3 747 aaKnown RBP22.06■■□□□ 1.12
SNRPC-202ENST00000374017 NCOA2Q15596 1464 aa22.06■■□□□ 1.12
SNRPC-202ENST00000374017 ARHGEF11O15085 1522 aa22.05■■□□□ 1.12
SNRPC-202ENST00000374017 PHLDB1Q86UU1 1377 aa22.04■■□□□ 1.12
SNRPC-202ENST00000374017 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.04■■□□□ 1.12
SNRPC-202ENST00000374017 TROQ12816 1431 aaPredicted RBP22.04■■□□□ 1.12
SNRPC-202ENST00000374017 MAGI3Q5TCQ9 1506 aa22.03■■□□□ 1.12
SNRPC-202ENST00000374017 ATP10BO94823 1461 aa22.02■■□□□ 1.12
SNRPC-202ENST00000374017 MYOM3Q5VTT5 1437 aa22.01■■□□□ 1.11
SNRPC-202ENST00000374017 PLEKHD1A6NEE1 506 aa22■■□□□ 1.11
SNRPC-202ENST00000374017 ADCY10Q96PN6 1610 aa21.98■■□□□ 1.11
SNRPC-202ENST00000374017 FGD6Q6ZV73 1430 aa21.97■■□□□ 1.11
SNRPC-202ENST00000374017 ARID3CA6NKF2 412 aa21.96■■□□□ 1.11
SNRPC-202ENST00000374017 MIA2Q96PC5 1412 aa21.96■■□□□ 1.11
SNRPC-202ENST00000374017 KDM5BQ9UGL1 1544 aa21.94■■□□□ 1.1
SNRPC-202ENST00000374017 KIF14Q15058 1648 aa21.93■■□□□ 1.1
SNRPC-202ENST00000374017 ITSN2Q9NZM3 1697 aa21.88■■□□□ 1.09
SNRPC-202ENST00000374017 TCOF1Q13428 1488 aaKnown RBP21.87■■□□□ 1.09
SNRPC-202ENST00000374017 FAM50AQ14320 339 aaKnown RBP21.86■■□□□ 1.09
SNRPC-202ENST00000374017 ZCCHC11Q5TAX3 1644 aaKnown RBP21.86■■□□□ 1.09
SNRPC-202ENST00000374017 PTPN23Q9H3S7 1636 aa21.85■■□□□ 1.09
SNRPC-202ENST00000374017 ABCC10Q5T3U5 1492 aa21.81■■□□□ 1.08
SNRPC-202ENST00000374017 NPM1P06748 294 aaKnown RBP eCLIP21.78■■□□□ 1.08
SNRPC-202ENST00000374017 GPATCH8Q9UKJ3 1502 aaKnown RBP21.78■■□□□ 1.08
SNRPC-202ENST00000374017 CFDP1Q9UEE9 299 aaPredicted RBP21.76■■□□□ 1.07
SNRPC-202ENST00000374017 WDR7Q9Y4E6 1490 aa21.74■■□□□ 1.07
SNRPC-202ENST00000374017 ZEB1P37275 1124 aaPredicted RBP21.72■■□□□ 1.07
SNRPC-202ENST00000374017 RIMBP3CA6NJZ7 1639 aa21.71■■□□□ 1.07
SNRPC-202ENST00000374017 RIMBP3BA6NNM3 1639 aa21.71■■□□□ 1.07
SNRPC-202ENST00000374017 RIMBP3Q9UFD9 1639 aa21.71■■□□□ 1.07
SNRPC-202ENST00000374017 ITGAEP38570 1179 aa21.71■■□□□ 1.07
SNRPC-202ENST00000374017 CDC42BPAQ5VT25 1732 aa21.7■■□□□ 1.06
SNRPC-202ENST00000374017 PREX2Q70Z35 1606 aa21.69■■□□□ 1.06
SNRPC-202ENST00000374017 HRCP23327 699 aa21.69■■□□□ 1.06
SNRPC-202ENST00000374017 CAMSAP2Q08AD1 1489 aa21.69■■□□□ 1.06
SNRPC-202ENST00000374017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.69■■□□□ 1.068e-6■□□□□ 8.1
SNRPC-202ENST00000374017 AKNAQ7Z591 1439 aa21.68■■□□□ 1.06
SNRPC-202ENST00000374017 DNMT1P26358 1616 aaKnown RBP21.66■■□□□ 1.06
SNRPC-202ENST00000374017 ARAP3Q8WWN8 1544 aa21.66■■□□□ 1.06
SNRPC-202ENST00000374017 ASXL2Q76L83 1435 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms