RNA–Protein interactions for RNA: ENST00000374017.3

SNRPC-202, Transcript of small nuclear ribonucleoprotein polypeptide C, humanhuman

TSL 2 BASIC

Gene SNRPC, Length 1,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPC-202ENST00000374017 NISCHQ9Y2I1 1504 aa33.17■■■□□ 2.9
SNRPC-202ENST00000374017 CCDC180Q9P1Z9 1646 aa29.1■■■□□ 2.25
SNRPC-202ENST00000374017 ZCCHC6Q5VYS8 1495 aaKnown RBP27.86■■■□□ 2.05
SNRPC-202ENST00000374017 DCAF1Q9Y4B6 1507 aa27.57■■■□□ 2
SNRPC-202ENST00000374017 ABCC9O60706 1549 aa27.41■■□□□ 1.98
SNRPC-202ENST00000374017 MYO15BQ96JP2 1530 aa27.34■■□□□ 1.97
SNRPC-202ENST00000374017 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
SNRPC-202ENST00000374017 NACADO15069 1562 aa27.14■■□□□ 1.93
SNRPC-202ENST00000374017 RB1CC1Q8TDY2 1594 aa26.92■■□□□ 1.9
SNRPC-202ENST00000374017 SHROOM4Q9ULL8 1493 aa26.73■■□□□ 1.87
SNRPC-202ENST00000374017 SCRIBQ14160 1630 aa26.54■■□□□ 1.84
SNRPC-202ENST00000374017 UNC13AQ9UPW8 1703 aa26.17■■□□□ 1.78
SNRPC-202ENST00000374017 BICRAQ9NZM4 1560 aa25.95■■□□□ 1.74
SNRPC-202ENST00000374017 PABPN1Q86U42 306 aaKnown RBP eCLIP25.75■■□□□ 1.71
SNRPC-202ENST00000374017 SUPT5HO00267 1087 aaKnown RBP25.71■■□□□ 1.71
SNRPC-202ENST00000374017 BAZ1AQ9NRL2 1556 aaPredicted RBP25.69■■□□□ 1.7
SNRPC-202ENST00000374017 CECR2Q9BXF3 1484 aa25.64■■□□□ 1.69
SNRPC-202ENST00000374017 RSF1Q96T23 1441 aaPredicted RBP25.63■■□□□ 1.69
SNRPC-202ENST00000374017 MROH2BQ7Z745 1585 aa25.52■■□□□ 1.68
SNRPC-202ENST00000374017 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
SNRPC-202ENST00000374017 PEG3Q9GZU2 1588 aa25.3■■□□□ 1.64
SNRPC-202ENST00000374017 WIZO95785 1651 aa25.29■■□□□ 1.64
SNRPC-202ENST00000374017 EIF4G1Q04637 1599 aaKnown RBP25.24■■□□□ 1.63
SNRPC-202ENST00000374017 SMARCA2P51531 1590 aa25.22■■□□□ 1.63
SNRPC-202ENST00000374017 TOP2AP11388 1531 aaKnown RBP25.17■■□□□ 1.62
SNRPC-202ENST00000374017 ATAD2BQ9ULI0 1458 aa25.14■■□□□ 1.61
SNRPC-202ENST00000374017 BAZ1BQ9UIG0 1483 aaKnown RBP25.02■■□□□ 1.6
SNRPC-202ENST00000374017 NCAPD3P42695 1498 aa25■■□□□ 1.59
SNRPC-202ENST00000374017 HMGXB3Q12766 1538 aa25■■□□□ 1.59
SNRPC-202ENST00000374017 CC2D2AQ9P2K1 1620 aa24.86■■□□□ 1.57
SNRPC-202ENST00000374017 CCDC88BA6NC98 1476 aa24.82■■□□□ 1.56
SNRPC-202ENST00000374017 DNAJC5BQ9UF47 199 aa24.7■■□□□ 1.54
SNRPC-202ENST00000374017 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
SNRPC-202ENST00000374017 CFTRP13569 1480 aa24.38■■□□□ 1.49
SNRPC-202ENST00000374017 CADPSQ9ULU8 1353 aa24.32■■□□□ 1.48
SNRPC-202ENST00000374017 TRIM41Q8WV44 630 aa24.31■■□□□ 1.48
SNRPC-202ENST00000374017 PRDM2Q13029 1718 aa24.27■■□□□ 1.48
SNRPC-202ENST00000374017 LAMC3Q9Y6N6 1575 aa24.2■■□□□ 1.46
SNRPC-202ENST00000374017 WRNQ14191 1432 aaPredicted RBP eCLIP24.18■■□□□ 1.46
SNRPC-202ENST00000374017 ABCC8Q09428 1581 aa24.17■■□□□ 1.46
SNRPC-202ENST00000374017 PDS5BQ9NTI5 1447 aa24.03■■□□□ 1.44
SNRPC-202ENST00000374017 FANCD2Q9BXW9 1451 aa24.03■■□□□ 1.44
SNRPC-202ENST00000374017 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
SNRPC-202ENST00000374017 SYNJ1O43426 1573 aa24■■□□□ 1.43
SNRPC-202ENST00000374017 BIVM-ERCC5R4GMW8 1640 aa23.99■■□□□ 1.43
SNRPC-202ENST00000374017 NESP48681 1621 aa23.98■■□□□ 1.43
SNRPC-202ENST00000374017 CEP164Q9UPV0 1460 aa23.94■■□□□ 1.42
SNRPC-202ENST00000374017 EEA1Q15075 1411 aa23.92■■□□□ 1.42
SNRPC-202ENST00000374017 CUX1P39880 1505 aa23.9■■□□□ 1.42
SNRPC-202ENST00000374017 DNMBPQ6XZF7 1577 aa23.83■■□□□ 1.41
SNRPC-202ENST00000374017 KIF21AQ7Z4S6 1674 aa23.75■■□□□ 1.39
SNRPC-202ENST00000374017 TOPBP1Q92547 1522 aa23.74■■□□□ 1.39
SNRPC-202ENST00000374017 SOGA1O94964 1423 aa23.71■■□□□ 1.39
SNRPC-202ENST00000374017 FGD5Q6ZNL6 1462 aa23.69■■□□□ 1.38
SNRPC-202ENST00000374017 FAM9AQ8IZU1 332 aaPredicted RBP23.69■■□□□ 1.38
SNRPC-202ENST00000374017 MRC2Q9UBG0 1479 aa23.68■■□□□ 1.38
SNRPC-202ENST00000374017 URB2Q14146 1524 aaKnown RBP23.68■■□□□ 1.38
SNRPC-202ENST00000374017 ERCC6Q03468 1493 aa23.64■■□□□ 1.38
SNRPC-202ENST00000374017 KIF27Q86VH2 1401 aa23.64■■□□□ 1.37
SNRPC-202ENST00000374017 CSRNP3Q8WYN3 585 aa23.63■■□□□ 1.37
SNRPC-202ENST00000374017 POLA1P09884 1462 aaPredicted RBP23.61■■□□□ 1.37
SNRPC-202ENST00000374017 RUSC2Q8N2Y8 1516 aa23.56■■□□□ 1.36
SNRPC-202ENST00000374017 WDR62O43379 1518 aa23.55■■□□□ 1.36
SNRPC-202ENST00000374017 ABCA10Q8WWZ4 1543 aa23.54■■□□□ 1.36
SNRPC-202ENST00000374017 CUX2O14529 1486 aa23.52■■□□□ 1.36
SNRPC-202ENST00000374017 LOC105371045A0A1W2PR82 267 aa23.51■■□□□ 1.35
SNRPC-202ENST00000374017 KIF21BO75037 1637 aa23.51■■□□□ 1.35
SNRPC-202ENST00000374017 GOLGA3Q08378 1498 aa23.48■■□□□ 1.35
SNRPC-202ENST00000374017 THOC2Q8NI27 1593 aaKnown RBP23.46■■□□□ 1.35
SNRPC-202ENST00000374017 RAD54L2Q9Y4B4 1467 aa23.44■■□□□ 1.34
SNRPC-202ENST00000374017 WDR97A6NE52 1622 aa23.44■■□□□ 1.34
SNRPC-202ENST00000374017 ERICH3Q5RHP9 1530 aa23.42■■□□□ 1.34
SNRPC-202ENST00000374017 IFT140Q96RY7 1462 aa23.41■■□□□ 1.34
SNRPC-202ENST00000374017 PRXQ9BXM0 1461 aa23.39■■□□□ 1.34
SNRPC-202ENST00000374017 TARBP1Q13395 1621 aaKnown RBP23.38■■□□□ 1.33
SNRPC-202ENST00000374017 TNIKQ9UKE5 1360 aa23.36■■□□□ 1.33
SNRPC-202ENST00000374017 IGF1RP08069 1367 aa23.34■■□□□ 1.33
SNRPC-202ENST00000374017 ABCA5Q8WWZ7 1642 aa23.33■■□□□ 1.33
SNRPC-202ENST00000374017 GAPVD1Q14C86 1478 aa23.3■■□□□ 1.32
SNRPC-202ENST00000374017 CUL7Q14999 1698 aa23.3■■□□□ 1.32
SNRPC-202ENST00000374017 UBTFP17480 764 aaKnown RBP23.29■■□□□ 1.32
SNRPC-202ENST00000374017 RAPGEF2Q9Y4G8 1499 aa23.27■■□□□ 1.32
SNRPC-202ENST00000374017 CARMIL1Q5VZK9 1371 aa23.27■■□□□ 1.31
SNRPC-202ENST00000374017 TDRD9Q8NDG6 1382 aaKnown RBP23.25■■□□□ 1.31
SNRPC-202ENST00000374017 EHMT2Q96KQ7 1210 aa23.24■■□□□ 1.31
SNRPC-202ENST00000374017 GRIN2BQ13224 1484 aa23.18■■□□□ 1.3
SNRPC-202ENST00000374017 CEP162Q5TB80 1403 aa23.17■■□□□ 1.3
SNRPC-202ENST00000374017 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
SNRPC-202ENST00000374017 AQRO60306 1485 aaKnown RBP eCLIP23.11■■□□□ 1.295e-8■■■■■ 32.2
SNRPC-202ENST00000374017 EIF4G3O43432 1585 aaKnown RBP23.1■■□□□ 1.29
SNRPC-202ENST00000374017 FHAD1B1AJZ9 1412 aa23.09■■□□□ 1.29
SNRPC-202ENST00000374017 ZNF608Q9ULD9 1512 aaPredicted RBP23.09■■□□□ 1.29
SNRPC-202ENST00000374017 ADAMTS12P58397 1594 aa23.06■■□□□ 1.28
SNRPC-202ENST00000374017 CLIP1P30622 1438 aa23.05■■□□□ 1.28
SNRPC-202ENST00000374017 MAGI1Q96QZ7 1491 aaPredicted RBP23.04■■□□□ 1.28
SNRPC-202ENST00000374017 SNAPC4Q5SXM2 1469 aa22.97■■□□□ 1.27
SNRPC-202ENST00000374017 DNAJC5Q9H3Z4 198 aa22.96■■□□□ 1.27
SNRPC-202ENST00000374017 CTTNBP2Q8WZ74 1663 aa22.94■■□□□ 1.26
SNRPC-202ENST00000374017 SYNJ2O15056 1496 aa22.91■■□□□ 1.26
SNRPC-202ENST00000374017 EFCAB5A4FU69 1503 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms