RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 IFT140Q96RY7 1462 aa36.1■■■■□ 3.37
SNX21-204ENST00000372542 ERCC6Q03468 1493 aa36.02■■■■□ 3.36
SNX21-204ENST00000372542 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.99■■■■□ 3.35
SNX21-204ENST00000372542 KANK4Q5T7N3 995 aaPredicted RBP35.99■■■■□ 3.35
SNX21-204ENST00000372542 CCER1Q8TC90 406 aaPredicted RBP35.99■■■■□ 3.35
SNX21-204ENST00000372542 GRIN2BQ13224 1484 aa35.98■■■■□ 3.35
SNX21-204ENST00000372542 TIAM1Q13009 1591 aa35.98■■■■□ 3.35
SNX21-204ENST00000372542 ADAMTS12P58397 1594 aa35.95■■■■□ 3.35
SNX21-204ENST00000372542 AQRO60306 1485 aaKnown RBP eCLIP35.95■■■■□ 3.35
SNX21-204ENST00000372542 THOC2Q8NI27 1593 aaKnown RBP35.93■■■■□ 3.34
SNX21-204ENST00000372542 SAMD9Q5K651 1589 aa35.91■■■■□ 3.34
SNX21-204ENST00000372542 PCF11O94913 1555 aaKnown RBP35.9■■■■□ 3.34
SNX21-204ENST00000372542 FHOD3Q2V2M9 1422 aa35.9■■■■□ 3.34
SNX21-204ENST00000372542 FYCO1Q9BQS8 1478 aa35.88■■■■□ 3.33
SNX21-204ENST00000372542 CFAP43Q8NDM7 1665 aa35.87■■■■□ 3.33
SNX21-204ENST00000372542 RRBP1Q9P2E9 1410 aaKnown RBP35.86■■■■□ 3.33
SNX21-204ENST00000372542 FMN1Q68DA7 1419 aa35.85■■■■□ 3.33
SNX21-204ENST00000372542 CASKIN1Q8WXD9 1431 aa35.84■■■■□ 3.33
SNX21-204ENST00000372542 P3H3Q8IVL6 736 aa35.83■■■■□ 3.33
SNX21-204ENST00000372542 ZNF608Q9ULD9 1512 aaPredicted RBP35.82■■■■□ 3.33
SNX21-204ENST00000372542 HNRNPUL2Q1KMD3 747 aaKnown RBP35.8■■■■□ 3.32
SNX21-204ENST00000372542 LRRC9Q6ZRR7 1453 aa35.79■■■■□ 3.32
SNX21-204ENST00000372542 EIF4G3O43432 1585 aaKnown RBP35.75■■■■□ 3.31
SNX21-204ENST00000372542 IQGAP2Q13576 1575 aa35.72■■■■□ 3.31
SNX21-204ENST00000372542 SNAPC4Q5SXM2 1469 aa35.68■■■■□ 3.3
SNX21-204ENST00000372542 CCNB3Q8WWL7 1395 aa35.68■■■■□ 3.3
SNX21-204ENST00000372542 MAGI1Q96QZ7 1491 aaPredicted RBP35.61■■■■□ 3.29
SNX21-204ENST00000372542 ATP1B4Q9UN42 357 aaPredicted RBP35.57■■■■□ 3.29
SNX21-204ENST00000372542 UGGT2Q9NYU1 1516 aa35.56■■■■□ 3.28
SNX21-204ENST00000372542 GRIN2AQ12879 1464 aa35.55■■■■□ 3.28
SNX21-204ENST00000372542 KIAA0586Q9BVV6 1533 aa35.53■■■■□ 3.28
SNX21-204ENST00000372542 PHLDB1Q86UU1 1377 aa35.47■■■■□ 3.27
SNX21-204ENST00000372542 SYNJ2O15056 1496 aa35.46■■■■□ 3.27
SNX21-204ENST00000372542 LRRIQ1Q96JM4 1722 aa35.44■■■■□ 3.26
SNX21-204ENST00000372542 CCDC18Q5T9S5 1454 aa35.41■■■■□ 3.26
SNX21-204ENST00000372542 HECW1Q76N89 1606 aa35.41■■■■□ 3.26
SNX21-204ENST00000372542 MTUS2Q5JR59 1369 aa35.36■■■■□ 3.25
SNX21-204ENST00000372542 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.35■■■■□ 3.25
SNX21-204ENST00000372542 KIAA0556O60303 1618 aa35.34■■■■□ 3.25
SNX21-204ENST00000372542 EHBP1L1Q8N3D4 1523 aa35.34■■■■□ 3.25
SNX21-204ENST00000372542 CLSPNQ9HAW4 1339 aa35.33■■■■□ 3.25
SNX21-204ENST00000372542 CHMP7Q8WUX9 453 aaPredicted RBP35.32■■■■□ 3.25
SNX21-204ENST00000372542 DISP1Q96F81 1524 aa35.29■■■■□ 3.24
SNX21-204ENST00000372542 CEP170Q5SW79 1584 aa35.29■■■■□ 3.24
SNX21-204ENST00000372542 SUPT6HQ7KZ85 1726 aaKnown RBP35.27■■■■□ 3.24
SNX21-204ENST00000372542 NUP160Q12769 1436 aa35.25■■■■□ 3.23
SNX21-204ENST00000372542 DHX57Q6P158 1386 aaKnown RBP35.24■■■■□ 3.23
SNX21-204ENST00000372542 EPRSP07814 1512 aaKnown RBP35.22■■■■□ 3.23
SNX21-204ENST00000372542 FGD6Q6ZV73 1430 aa35.21■■■■□ 3.23
SNX21-204ENST00000372542 FAM50AQ14320 339 aaKnown RBP35.2■■■■□ 3.23
SNX21-204ENST00000372542 NCOA2Q15596 1464 aa35.2■■■■□ 3.22
SNX21-204ENST00000372542 ITGAEP38570 1179 aa35.19■■■■□ 3.22
SNX21-204ENST00000372542 ARHGEF11O15085 1522 aa35.15■■■■□ 3.22
SNX21-204ENST00000372542 MYOM3Q5VTT5 1437 aa35.14■■■■□ 3.22
SNX21-204ENST00000372542 SETD5Q9C0A6 1442 aa35.12■■■■□ 3.21
SNX21-204ENST00000372542 MAGI3Q5TCQ9 1506 aa35.12■■■■□ 3.21
SNX21-204ENST00000372542 FBLN2P98095 1184 aa35.11■■■■□ 3.21
SNX21-204ENST00000372542 RAPGEF6Q8TEU7 1601 aa35.1■■■■□ 3.21
SNX21-204ENST00000372542 RAB3GAP2Q9H2M9 1393 aa35.09■■■■□ 3.21
SNX21-204ENST00000372542 CARMIL2Q6F5E8 1435 aa35.07■■■■□ 3.21
SNX21-204ENST00000372542 CDK13Q14004 1512 aaKnown RBP35.05■■■■□ 3.2
SNX21-204ENST00000372542 JPH4Q96JJ6 628 aa35■■■■□ 3.19
SNX21-204ENST00000372542 NUP153P49790 1475 aaKnown RBP35■■■■□ 3.19
SNX21-204ENST00000372542 PTPN23Q9H3S7 1636 aa34.97■■■■□ 3.19
SNX21-204ENST00000372542 TCOF1Q13428 1488 aaKnown RBP34.94■■■■□ 3.18
SNX21-204ENST00000372542 MIA2Q96PC5 1412 aa34.91■■■■□ 3.18
SNX21-204ENST00000372542 CDK11AQ9UQ88 783 aaPredicted RBP34.88■■■■□ 3.17
SNX21-204ENST00000372542 CHD1O14646 1710 aa34.86■■■■□ 3.17
SNX21-204ENST00000372542 ZNF316A6NFI3 1004 aaPredicted RBP34.84■■■■□ 3.17
SNX21-204ENST00000372542 HFM1A2PYH4 1435 aa34.82■■■■□ 3.17
SNX21-204ENST00000372542 PLB1Q6P1J6 1458 aa34.82■■■■□ 3.16
SNX21-204ENST00000372542 MAPKBP1O60336 1514 aa34.81■■■■□ 3.16
SNX21-204ENST00000372542 PTPRKQ15262 1439 aa34.79■■■■□ 3.16
SNX21-204ENST00000372542 ARID3CA6NKF2 412 aa34.78■■■■□ 3.16
SNX21-204ENST00000372542 ABCA8O94911 1581 aa34.78■■■■□ 3.16
SNX21-204ENST00000372542 TROQ12816 1431 aaPredicted RBP34.76■■■■□ 3.15
SNX21-204ENST00000372542 PRG4Q92954 1404 aaPredicted RBP34.71■■■■□ 3.15
SNX21-204ENST00000372542 ADCY10Q96PN6 1610 aa34.71■■■■□ 3.15
SNX21-204ENST00000372542 AKNAQ7Z591 1439 aa34.69■■■■□ 3.14
SNX21-204ENST00000372542 NAIPQ13075 1403 aa34.69■■■■□ 3.14
SNX21-204ENST00000372542 SHROOM2Q13796 1616 aa34.68■■■■□ 3.14
SNX21-204ENST00000372542 DIEXFQ68CQ4 756 aaKnown RBP34.68■■■■□ 3.14
SNX21-204ENST00000372542 GCC2Q8IWJ2 1684 aa34.64■■■■□ 3.14
SNX21-204ENST00000372542 ITSN2Q9NZM3 1697 aa34.63■■■■□ 3.13
SNX21-204ENST00000372542 UACAQ9BZF9 1416 aa34.61■■■■□ 3.13
SNX21-204ENST00000372542 PTPRGP23470 1445 aa34.6■■■■□ 3.13
SNX21-204ENST00000372542 ATP10BO94823 1461 aa34.56■■■■□ 3.12
SNX21-204ENST00000372542 DNMT1P26358 1616 aaKnown RBP34.55■■■■□ 3.12
SNX21-204ENST00000372542 TIMELESSQ9UNS1 1208 aa34.53■■■■□ 3.12
SNX21-204ENST00000372542 KIF14Q15058 1648 aa34.52■■■■□ 3.12
SNX21-204ENST00000372542 DAPK1P53355 1430 aa34.51■■■■□ 3.12
SNX21-204ENST00000372542 PLEKHD1A6NEE1 506 aa34.51■■■■□ 3.11
SNX21-204ENST00000372542 ROCK1Q13464 1354 aa34.5■■■■□ 3.11
SNX21-204ENST00000372542 GPATCH8Q9UKJ3 1502 aaKnown RBP34.49■■■■□ 3.11
SNX21-204ENST00000372542 ACIN1Q9UKV3 1341 aaKnown RBP34.48■■■■□ 3.11
SNX21-204ENST00000372542 CLASP1Q7Z460 1538 aa34.44■■■■□ 3.1
SNX21-204ENST00000372542 ABCC5O15440 1437 aa34.44■■■■□ 3.1
SNX21-204ENST00000372542 CHIC2Q9UKJ5 165 aa34.43■■■■□ 3.1
SNX21-204ENST00000372542 CAMSAP2Q08AD1 1489 aa34.43■■■■□ 3.1
SNX21-204ENST00000372542 RRP7BPQ9NSQ0 103 aa34.42■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms