RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 FHAD1B1AJZ9 1412 aa27.07■■□□□ 1.92
CTSA-204ENST00000372484 PBRM1Q86U86 1689 aa27.06■■□□□ 1.92
CTSA-204ENST00000372484 P3H3Q8IVL6 736 aa27.06■■□□□ 1.92
CTSA-204ENST00000372484 WDR62O43379 1518 aa27.05■■□□□ 1.92
CTSA-204ENST00000372484 MAP3K1Q13233 1512 aa27.02■■□□□ 1.92
CTSA-204ENST00000372484 TIAM1Q13009 1591 aa27.02■■□□□ 1.92
CTSA-204ENST00000372484 AQRO60306 1485 aaKnown RBP eCLIP27.01■■□□□ 1.916e-8■■■■□ 26.2
CTSA-204ENST00000372484 FHOD3Q2V2M9 1422 aa27.01■■□□□ 1.91
CTSA-204ENST00000372484 ERCC6Q03468 1493 aa27■■□□□ 1.91
CTSA-204ENST00000372484 IFT140Q96RY7 1462 aa26.98■■□□□ 1.91
CTSA-204ENST00000372484 PCF11O94913 1555 aaKnown RBP26.98■■□□□ 1.91
CTSA-204ENST00000372484 GRIN2BQ13224 1484 aa26.93■■□□□ 1.9
CTSA-204ENST00000372484 RRBP1Q9P2E9 1410 aaKnown RBP26.92■■□□□ 1.9
CTSA-204ENST00000372484 ADAMTS12P58397 1594 aa26.91■■□□□ 1.9
CTSA-204ENST00000372484 ZNF608Q9ULD9 1512 aaPredicted RBP26.9■■□□□ 1.9
CTSA-204ENST00000372484 FYCO1Q9BQS8 1478 aa26.9■■□□□ 1.9
CTSA-204ENST00000372484 CFAP43Q8NDM7 1665 aa26.9■■□□□ 1.9
CTSA-204ENST00000372484 SAMD9Q5K651 1589 aa26.89■■□□□ 1.9
CTSA-204ENST00000372484 LRRC9Q6ZRR7 1453 aa26.89■■□□□ 1.9
CTSA-204ENST00000372484 ATP1B4Q9UN42 357 aaPredicted RBP26.89■■□□□ 1.89
CTSA-204ENST00000372484 FMN1Q68DA7 1419 aa26.88■■□□□ 1.89
CTSA-204ENST00000372484 CASKIN1Q8WXD9 1431 aa26.87■■□□□ 1.89
CTSA-204ENST00000372484 THOC2Q8NI27 1593 aaKnown RBP26.86■■□□□ 1.89
CTSA-204ENST00000372484 CCNB3Q8WWL7 1395 aa26.84■■□□□ 1.89
CTSA-204ENST00000372484 EIF4G3O43432 1585 aaKnown RBP26.79■■□□□ 1.88
CTSA-204ENST00000372484 SNAPC4Q5SXM2 1469 aa26.78■■□□□ 1.88
CTSA-204ENST00000372484 IQGAP2Q13576 1575 aa26.77■■□□□ 1.88
CTSA-204ENST00000372484 PHLDB1Q86UU1 1377 aa26.71■■□□□ 1.87
CTSA-204ENST00000372484 LRRIQ1Q96JM4 1722 aa26.65■■□□□ 1.86
CTSA-204ENST00000372484 ITGAEP38570 1179 aa26.65■■□□□ 1.86
CTSA-204ENST00000372484 GRIN2AQ12879 1464 aa26.63■■□□□ 1.85
CTSA-204ENST00000372484 MAGI1Q96QZ7 1491 aaPredicted RBP26.62■■□□□ 1.85
CTSA-204ENST00000372484 UGGT2Q9NYU1 1516 aa26.61■■□□□ 1.85
CTSA-204ENST00000372484 KIAA0586Q9BVV6 1533 aa26.6■■□□□ 1.85
CTSA-204ENST00000372484 MTUS2Q5JR59 1369 aa26.59■■□□□ 1.85
CTSA-204ENST00000372484 FAM50AQ14320 339 aaKnown RBP26.56■■□□□ 1.84
CTSA-204ENST00000372484 DHX57Q6P158 1386 aaKnown RBP26.55■■□□□ 1.84
CTSA-204ENST00000372484 SYNJ2O15056 1496 aa26.53■■□□□ 1.84
CTSA-204ENST00000372484 HECW1Q76N89 1606 aa26.53■■□□□ 1.84
CTSA-204ENST00000372484 CHMP7Q8WUX9 453 aaPredicted RBP26.53■■□□□ 1.84
CTSA-204ENST00000372484 CCDC18Q5T9S5 1454 aa26.52■■□□□ 1.84
CTSA-204ENST00000372484 CLSPNQ9HAW4 1339 aa26.52■■□□□ 1.84
CTSA-204ENST00000372484 EHBP1L1Q8N3D4 1523 aa26.48■■□□□ 1.83
CTSA-204ENST00000372484 KIAA0556O60303 1618 aa26.48■■□□□ 1.83
CTSA-204ENST00000372484 DISP1Q96F81 1524 aa26.47■■□□□ 1.83
CTSA-204ENST00000372484 SUPT6HQ7KZ85 1726 aaKnown RBP26.47■■□□□ 1.83
CTSA-204ENST00000372484 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.47■■□□□ 1.83
CTSA-204ENST00000372484 FGD6Q6ZV73 1430 aa26.46■■□□□ 1.83
CTSA-204ENST00000372484 FBLN2P98095 1184 aa26.46■■□□□ 1.83
CTSA-204ENST00000372484 CEP170Q5SW79 1584 aa26.45■■□□□ 1.83
CTSA-204ENST00000372484 NCOA2Q15596 1464 aa26.45■■□□□ 1.82
CTSA-204ENST00000372484 RAB3GAP2Q9H2M9 1393 aa26.44■■□□□ 1.82
CTSA-204ENST00000372484 EPRSP07814 1512 aaKnown RBP26.43■■□□□ 1.82
CTSA-204ENST00000372484 SETD5Q9C0A6 1442 aa26.42■■□□□ 1.82
CTSA-204ENST00000372484 MAGI3Q5TCQ9 1506 aa26.41■■□□□ 1.82
CTSA-204ENST00000372484 MYOM3Q5VTT5 1437 aa26.38■■□□□ 1.81
CTSA-204ENST00000372484 CDK13Q14004 1512 aaKnown RBP26.37■■□□□ 1.81
CTSA-204ENST00000372484 NUP160Q12769 1436 aa26.36■■□□□ 1.81
CTSA-204ENST00000372484 ARHGEF11O15085 1522 aa26.34■■□□□ 1.81
CTSA-204ENST00000372484 ARID3CA6NKF2 412 aa26.32■■□□□ 1.8
CTSA-204ENST00000372484 ZNF316A6NFI3 1004 aaPredicted RBP26.31■■□□□ 1.8
CTSA-204ENST00000372484 RAPGEF6Q8TEU7 1601 aa26.31■■□□□ 1.8
CTSA-204ENST00000372484 JPH4Q96JJ6 628 aa26.27■■□□□ 1.8
CTSA-204ENST00000372484 NUP153P49790 1475 aaKnown RBP26.27■■□□□ 1.8
CTSA-204ENST00000372484 PTPN23Q9H3S7 1636 aa26.27■■□□□ 1.8
CTSA-204ENST00000372484 CARMIL2Q6F5E8 1435 aa26.26■■□□□ 1.79
CTSA-204ENST00000372484 DIEXFQ68CQ4 756 aaKnown RBP26.26■■□□□ 1.79
CTSA-204ENST00000372484 MAPKBP1O60336 1514 aa26.22■■□□□ 1.79
CTSA-204ENST00000372484 PTPRKQ15262 1439 aa26.2■■□□□ 1.79
CTSA-204ENST00000372484 TCOF1Q13428 1488 aaKnown RBP26.17■■□□□ 1.78
CTSA-204ENST00000372484 PLB1Q6P1J6 1458 aa26.17■■□□□ 1.78
CTSA-204ENST00000372484 CDK11AQ9UQ88 783 aaPredicted RBP26.17■■□□□ 1.78
CTSA-204ENST00000372484 HFM1A2PYH4 1435 aa26.15■■□□□ 1.78
CTSA-204ENST00000372484 MIA2Q96PC5 1412 aa26.15■■□□□ 1.78
CTSA-204ENST00000372484 CHD1O14646 1710 aa26.12■■□□□ 1.77
CTSA-204ENST00000372484 NAIPQ13075 1403 aa26.08■■□□□ 1.77
CTSA-204ENST00000372484 TROQ12816 1431 aaPredicted RBP26.05■■□□□ 1.76
CTSA-204ENST00000372484 PRG4Q92954 1404 aaPredicted RBP26.04■■□□□ 1.76
CTSA-204ENST00000372484 ABCA8O94911 1581 aa26.03■■□□□ 1.76
CTSA-204ENST00000372484 CHIC2Q9UKJ5 165 aa26.01■■□□□ 1.75
CTSA-204ENST00000372484 UACAQ9BZF9 1416 aa26■■□□□ 1.75
CTSA-204ENST00000372484 GCC2Q8IWJ2 1684 aa25.98■■□□□ 1.75
CTSA-204ENST00000372484 SIN3AQ96ST3 1273 aa25.98■■□□□ 1.75
CTSA-204ENST00000372484 RRP7BPQ9NSQ0 103 aa25.98■■□□□ 1.75
CTSA-204ENST00000372484 ADCY10Q96PN6 1610 aa25.97■■□□□ 1.75
CTSA-204ENST00000372484 AKNAQ7Z591 1439 aa25.97■■□□□ 1.75
CTSA-204ENST00000372484 NEUROD1Q13562 356 aa25.96■■□□□ 1.75
CTSA-204ENST00000372484 KIF14Q15058 1648 aa25.95■■□□□ 1.74
CTSA-204ENST00000372484 ITSN2Q9NZM3 1697 aa25.95■■□□□ 1.74
CTSA-204ENST00000372484 PTPRGP23470 1445 aa25.95■■□□□ 1.74
CTSA-204ENST00000372484 ATP10BO94823 1461 aa25.93■■□□□ 1.74
CTSA-204ENST00000372484 DNMT1P26358 1616 aaKnown RBP25.92■■□□□ 1.74
CTSA-204ENST00000372484 SHROOM2Q13796 1616 aa25.92■■□□□ 1.74
CTSA-204ENST00000372484 DAPK1P53355 1430 aa25.92■■□□□ 1.74
CTSA-204ENST00000372484 ZNF644Q9H582 1327 aaPredicted RBP25.91■■□□□ 1.74
CTSA-204ENST00000372484 PLEKHD1A6NEE1 506 aa25.91■■□□□ 1.74
CTSA-204ENST00000372484 TIMELESSQ9UNS1 1208 aa25.9■■□□□ 1.74
CTSA-204ENST00000372484 CFDP1Q9UEE9 299 aaPredicted RBP25.89■■□□□ 1.74
CTSA-204ENST00000372484 GPATCH8Q9UKJ3 1502 aaKnown RBP25.89■■□□□ 1.74
CTSA-204ENST00000372484 ABCC5O15440 1437 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms