RNA–Protein interactions for RNA: ENST00000372105.3

LRIT1-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRIT1, Length 2,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1-201ENST00000372105 CUL7Q14999 1698 aa23.98■■□□□ 1.43
LRIT1-201ENST00000372105 THOC2Q8NI27 1593 aaKnown RBP23.95■■□□□ 1.42
LRIT1-201ENST00000372105 IFT140Q96RY7 1462 aa23.9■■□□□ 1.42
LRIT1-201ENST00000372105 VPS8Q8N3P4 1428 aa23.89■■□□□ 1.41
LRIT1-201ENST00000372105 ZNF316A6NFI3 1004 aaPredicted RBP23.87■■□□□ 1.41
LRIT1-201ENST00000372105 AQRO60306 1485 aaKnown RBP eCLIP23.86■■□□□ 1.41
LRIT1-201ENST00000372105 PBRM1Q86U86 1689 aa23.85■■□□□ 1.41
LRIT1-201ENST00000372105 ARAP1Q96P48 1450 aa23.84■■□□□ 1.41
LRIT1-201ENST00000372105 ZNF608Q9ULD9 1512 aaPredicted RBP23.82■■□□□ 1.4
LRIT1-201ENST00000372105 ARHGAP35Q9NRY4 1499 aa23.81■■□□□ 1.4
LRIT1-201ENST00000372105 GRIN2BQ13224 1484 aa23.77■■□□□ 1.4
LRIT1-201ENST00000372105 CTTNBP2Q8WZ74 1663 aa23.76■■□□□ 1.39
LRIT1-201ENST00000372105 TTBK1Q5TCY1 1321 aaPredicted RBP23.73■■□□□ 1.39
LRIT1-201ENST00000372105 FHAD1B1AJZ9 1412 aa23.72■■□□□ 1.39
LRIT1-201ENST00000372105 ADAMTS12P58397 1594 aa23.72■■□□□ 1.39
LRIT1-201ENST00000372105 EIF4G3O43432 1585 aaKnown RBP23.71■■□□□ 1.39
LRIT1-201ENST00000372105 APLP2Q06481 763 aa23.68■■□□□ 1.38
LRIT1-201ENST00000372105 SNAPC4Q5SXM2 1469 aa23.62■■□□□ 1.37
LRIT1-201ENST00000372105 EFCAB5A4FU69 1503 aa23.61■■□□□ 1.37
LRIT1-201ENST00000372105 P3H3Q8IVL6 736 aa23.59■■□□□ 1.37
LRIT1-201ENST00000372105 FHOD3Q2V2M9 1422 aa23.55■■□□□ 1.36
LRIT1-201ENST00000372105 MAGI1Q96QZ7 1491 aaPredicted RBP23.53■■□□□ 1.36
LRIT1-201ENST00000372105 MIER1Q8N108 512 aa23.51■■□□□ 1.35
LRIT1-201ENST00000372105 SAMD9Q5K651 1589 aa23.51■■□□□ 1.35
LRIT1-201ENST00000372105 GRIN2AQ12879 1464 aa23.49■■□□□ 1.35
LRIT1-201ENST00000372105 IQGAP2Q13576 1575 aa23.49■■□□□ 1.35
LRIT1-201ENST00000372105 CLSPNQ9HAW4 1339 aa23.47■■□□□ 1.35
LRIT1-201ENST00000372105 KANK4Q5T7N3 995 aaPredicted RBP23.46■■□□□ 1.35
LRIT1-201ENST00000372105 YTHDC1Q96MU7 727 aaKnown RBP23.46■■□□□ 1.35
LRIT1-201ENST00000372105 SYNJ2O15056 1496 aa23.46■■□□□ 1.35
LRIT1-201ENST00000372105 PCF11O94913 1555 aaKnown RBP23.46■■□□□ 1.35
LRIT1-201ENST00000372105 CHMP7Q8WUX9 453 aaPredicted RBP23.43■■□□□ 1.34
LRIT1-201ENST00000372105 FMN1Q68DA7 1419 aa23.41■■□□□ 1.34
LRIT1-201ENST00000372105 MAP3K1Q13233 1512 aa23.4■■□□□ 1.34
LRIT1-201ENST00000372105 KIAA0586Q9BVV6 1533 aa23.4■■□□□ 1.34
LRIT1-201ENST00000372105 TIAM1Q13009 1591 aa23.4■■□□□ 1.34
LRIT1-201ENST00000372105 FBLN2P98095 1184 aa23.39■■□□□ 1.33
LRIT1-201ENST00000372105 CASKIN1Q8WXD9 1431 aa23.38■■□□□ 1.33
LRIT1-201ENST00000372105 FYCO1Q9BQS8 1478 aa23.38■■□□□ 1.33
LRIT1-201ENST00000372105 ATP1B4Q9UN42 357 aaPredicted RBP23.37■■□□□ 1.33
LRIT1-201ENST00000372105 UGGT2Q9NYU1 1516 aa23.37■■□□□ 1.33
LRIT1-201ENST00000372105 CEP170Q5SW79 1584 aa23.35■■□□□ 1.33
LRIT1-201ENST00000372105 CFAP43Q8NDM7 1665 aa23.34■■□□□ 1.33
LRIT1-201ENST00000372105 HNRNPUL2Q1KMD3 747 aaKnown RBP23.32■■□□□ 1.32
LRIT1-201ENST00000372105 NUP160Q12769 1436 aa23.3■■□□□ 1.32
LRIT1-201ENST00000372105 LRRC9Q6ZRR7 1453 aa23.3■■□□□ 1.32
LRIT1-201ENST00000372105 DISP1Q96F81 1524 aa23.26■■□□□ 1.31
LRIT1-201ENST00000372105 KIAA0556O60303 1618 aa23.25■■□□□ 1.31
LRIT1-201ENST00000372105 LRRIQ1Q96JM4 1722 aa23.22■■□□□ 1.31
LRIT1-201ENST00000372105 RRBP1Q9P2E9 1410 aaKnown RBP23.19■■□□□ 1.3
LRIT1-201ENST00000372105 CHD1O14646 1710 aa23.19■■□□□ 1.3
LRIT1-201ENST00000372105 JPH4Q96JJ6 628 aa23.16■■□□□ 1.3
LRIT1-201ENST00000372105 HECW1Q76N89 1606 aa23.16■■□□□ 1.3
LRIT1-201ENST00000372105 DHX57Q6P158 1386 aaKnown RBP23.12■■□□□ 1.29
LRIT1-201ENST00000372105 CCNB3Q8WWL7 1395 aa23.12■■□□□ 1.29
LRIT1-201ENST00000372105 CCDC18Q5T9S5 1454 aa23.12■■□□□ 1.29
LRIT1-201ENST00000372105 PHLDB1Q86UU1 1377 aa23.11■■□□□ 1.29
LRIT1-201ENST00000372105 CARMIL2Q6F5E8 1435 aa23.11■■□□□ 1.29
LRIT1-201ENST00000372105 MTUS2Q5JR59 1369 aa23.1■■□□□ 1.29
LRIT1-201ENST00000372105 SUPT16HQ9Y5B9 1047 aaKnown RBP23.1■■□□□ 1.29
LRIT1-201ENST00000372105 EPRSP07814 1512 aaKnown RBP23.08■■□□□ 1.28
LRIT1-201ENST00000372105 RAPGEF6Q8TEU7 1601 aa23.05■■□□□ 1.28
LRIT1-201ENST00000372105 EHBP1L1Q8N3D4 1523 aa23.04■■□□□ 1.28
LRIT1-201ENST00000372105 CDK13Q14004 1512 aaKnown RBP23.03■■□□□ 1.28
LRIT1-201ENST00000372105 MAGI3Q5TCQ9 1506 aa23.03■■□□□ 1.28
LRIT1-201ENST00000372105 ARID3CA6NKF2 412 aa23.01■■□□□ 1.27
LRIT1-201ENST00000372105 NUP153P49790 1475 aaKnown RBP23■■□□□ 1.27
LRIT1-201ENST00000372105 PRG4Q92954 1404 aaPredicted RBP23■■□□□ 1.27
LRIT1-201ENST00000372105 SUPT6HQ7KZ85 1726 aaKnown RBP22.99■■□□□ 1.27
LRIT1-201ENST00000372105 NCOA2Q15596 1464 aa22.98■■□□□ 1.27
LRIT1-201ENST00000372105 PLB1Q6P1J6 1458 aa22.98■■□□□ 1.27
LRIT1-201ENST00000372105 SHROOM2Q13796 1616 aa22.95■■□□□ 1.26
LRIT1-201ENST00000372105 ITGAEP38570 1179 aa22.95■■□□□ 1.26
LRIT1-201ENST00000372105 FAM50AQ14320 339 aaKnown RBP22.94■■□□□ 1.26
LRIT1-201ENST00000372105 FGD6Q6ZV73 1430 aa22.92■■□□□ 1.26
LRIT1-201ENST00000372105 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
LRIT1-201ENST00000372105 ABCA8O94911 1581 aa22.9■■□□□ 1.26
LRIT1-201ENST00000372105 MYOM3Q5VTT5 1437 aa22.89■■□□□ 1.26
LRIT1-201ENST00000372105 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
LRIT1-201ENST00000372105 TSHZ2Q9NRE2 1034 aa22.89■■□□□ 1.25
LRIT1-201ENST00000372105 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.88■■□□□ 1.25
LRIT1-201ENST00000372105 PTPRGP23470 1445 aa22.87■■□□□ 1.25
LRIT1-201ENST00000372105 CDK11AQ9UQ88 783 aaPredicted RBP22.85■■□□□ 1.25
LRIT1-201ENST00000372105 ERCC6L2Q5T890 1561 aa22.83■■□□□ 1.25
LRIT1-201ENST00000372105 ANP32EQ9BTT0 268 aa22.83■■□□□ 1.25
LRIT1-201ENST00000372105 PTPN23Q9H3S7 1636 aa22.79■■□□□ 1.24
LRIT1-201ENST00000372105 TROQ12816 1431 aaPredicted RBP22.79■■□□□ 1.24
LRIT1-201ENST00000372105 ATP10BO94823 1461 aa22.77■■□□□ 1.24
LRIT1-201ENST00000372105 UACAQ9BZF9 1416 aa22.74■■□□□ 1.23
LRIT1-201ENST00000372105 TCOF1Q13428 1488 aaKnown RBP22.74■■□□□ 1.23
LRIT1-201ENST00000372105 MIA2Q96PC5 1412 aa22.73■■□□□ 1.23
LRIT1-201ENST00000372105 SETD5Q9C0A6 1442 aa22.73■■□□□ 1.23
LRIT1-201ENST00000372105 RAB3GAP2Q9H2M9 1393 aa22.73■■□□□ 1.23
LRIT1-201ENST00000372105 ADCY10Q96PN6 1610 aa22.71■■□□□ 1.23
LRIT1-201ENST00000372105 PLEKHD1A6NEE1 506 aa22.7■■□□□ 1.23
LRIT1-201ENST00000372105 KIF14Q15058 1648 aa22.7■■□□□ 1.22
LRIT1-201ENST00000372105 PTPRKQ15262 1439 aa22.69■■□□□ 1.22
LRIT1-201ENST00000372105 MAPKBP1O60336 1514 aa22.66■■□□□ 1.22
LRIT1-201ENST00000372105 ABCC2Q92887 1545 aa22.66■■□□□ 1.22
LRIT1-201ENST00000372105 ITSN2Q9NZM3 1697 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms