RNA–Protein interactions for RNA: ENST00000372105.3

LRIT1-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRIT1, Length 2,228 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1-201ENST00000372105 NISCHQ9Y2I1 1504 aa34.26■■■■□ 3.08
LRIT1-201ENST00000372105 CCDC180Q9P1Z9 1646 aa29.77■■■□□ 2.36
LRIT1-201ENST00000372105 ZCCHC6Q5VYS8 1495 aaKnown RBP28.8■■■□□ 2.2
LRIT1-201ENST00000372105 DCAF8L2P0C7V8 631 aa28.36■■■□□ 2.13
LRIT1-201ENST00000372105 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
LRIT1-201ENST00000372105 SHROOM4Q9ULL8 1493 aa28.16■■■□□ 2.1
LRIT1-201ENST00000372105 ABCC9O60706 1549 aa28.12■■■□□ 2.09
LRIT1-201ENST00000372105 MYO15BQ96JP2 1530 aa27.87■■■□□ 2.05
LRIT1-201ENST00000372105 NACADO15069 1562 aa27.7■■■□□ 2.03
LRIT1-201ENST00000372105 SCRIBQ14160 1630 aa27.48■■□□□ 1.99
LRIT1-201ENST00000372105 RB1CC1Q8TDY2 1594 aa27.45■■□□□ 1.98
LRIT1-201ENST00000372105 SUPT5HO00267 1087 aaKnown RBP27.16■■□□□ 1.94
LRIT1-201ENST00000372105 UNC13AQ9UPW8 1703 aa26.94■■□□□ 1.9
LRIT1-201ENST00000372105 CECR2Q9BXF3 1484 aa26.66■■□□□ 1.86
LRIT1-201ENST00000372105 RSF1Q96T23 1441 aaPredicted RBP26.66■■□□□ 1.86
LRIT1-201ENST00000372105 BICRAQ9NZM4 1560 aa26.64■■□□□ 1.86
LRIT1-201ENST00000372105 HRCP23327 699 aa26.58■■□□□ 1.85
LRIT1-201ENST00000372105 PABPN1Q86U42 306 aaKnown RBP eCLIP26.57■■□□□ 1.84
LRIT1-201ENST00000372105 MROH2BQ7Z745 1585 aa26.51■■□□□ 1.83
LRIT1-201ENST00000372105 BAZ1AQ9NRL2 1556 aaPredicted RBP26.44■■□□□ 1.82
LRIT1-201ENST00000372105 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
LRIT1-201ENST00000372105 WIZO95785 1651 aa26.32■■□□□ 1.8
LRIT1-201ENST00000372105 CHIC1Q5VXU3 224 aa26.29■■□□□ 1.8
LRIT1-201ENST00000372105 TOP2AP11388 1531 aaKnown RBP26■■□□□ 1.75
LRIT1-201ENST00000372105 PCGF6Q9BYE7 350 aa25.99■■□□□ 1.75
LRIT1-201ENST00000372105 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.74
LRIT1-201ENST00000372105 ATAD2BQ9ULI0 1458 aa25.85■■□□□ 1.73
LRIT1-201ENST00000372105 EIF4G1Q04637 1599 aaKnown RBP25.82■■□□□ 1.72
LRIT1-201ENST00000372105 SMARCA2P51531 1590 aa25.81■■□□□ 1.72
LRIT1-201ENST00000372105 CCDC88BA6NC98 1476 aa25.77■■□□□ 1.72
LRIT1-201ENST00000372105 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
LRIT1-201ENST00000372105 PPARGC1BQ86YN6 1023 aaKnown RBP25.69■■□□□ 1.7
LRIT1-201ENST00000372105 NCAPD3P42695 1498 aa25.57■■□□□ 1.68
LRIT1-201ENST00000372105 HMGXB3Q12766 1538 aa25.55■■□□□ 1.68
LRIT1-201ENST00000372105 TRIM26Q12899 539 aaPredicted RBP25.52■■□□□ 1.68
LRIT1-201ENST00000372105 TRIM41Q8WV44 630 aa25.49■■□□□ 1.67
LRIT1-201ENST00000372105 CC2D2AQ9P2K1 1620 aa25.42■■□□□ 1.66
LRIT1-201ENST00000372105 LOC105371045A0A1W2PR82 267 aa25.4■■□□□ 1.66
LRIT1-201ENST00000372105 ZEB1P37275 1124 aaPredicted RBP25.36■■□□□ 1.65
LRIT1-201ENST00000372105 PELP1Q8IZL8 1130 aaKnown RBP25.32■■□□□ 1.64
LRIT1-201ENST00000372105 ABCC8Q09428 1581 aa25.3■■□□□ 1.64
LRIT1-201ENST00000372105 FAM9AQ8IZU1 332 aaPredicted RBP25.09■■□□□ 1.61
LRIT1-201ENST00000372105 WRNQ14191 1432 aaPredicted RBP eCLIP25.09■■□□□ 1.61
LRIT1-201ENST00000372105 CFTRP13569 1480 aa25.06■■□□□ 1.6
LRIT1-201ENST00000372105 SYNJ1O43426 1573 aa24.99■■□□□ 1.59
LRIT1-201ENST00000372105 CADPSQ9ULU8 1353 aa24.95■■□□□ 1.59
LRIT1-201ENST00000372105 PRDM2Q13029 1718 aa24.93■■□□□ 1.58
LRIT1-201ENST00000372105 SOGA1O94964 1423 aa24.85■■□□□ 1.57
LRIT1-201ENST00000372105 TOP2BQ02880 1626 aa24.85■■□□□ 1.57
LRIT1-201ENST00000372105 BIVM-ERCC5R4GMW8 1640 aa24.82■■□□□ 1.56
LRIT1-201ENST00000372105 DNAJC5BQ9UF47 199 aa24.8■■□□□ 1.56
LRIT1-201ENST00000372105 SCAF1Q9H7N4 1312 aaKnown RBP24.79■■□□□ 1.56
LRIT1-201ENST00000372105 EHMT2Q96KQ7 1210 aa24.77■■□□□ 1.56
LRIT1-201ENST00000372105 CUX1P39880 1505 aa24.77■■□□□ 1.56
LRIT1-201ENST00000372105 RUSC2Q8N2Y8 1516 aa24.77■■□□□ 1.56
LRIT1-201ENST00000372105 EEA1Q15075 1411 aa24.76■■□□□ 1.55
LRIT1-201ENST00000372105 NESP48681 1621 aa24.74■■□□□ 1.55
LRIT1-201ENST00000372105 FANCD2Q9BXW9 1451 aa24.69■■□□□ 1.54
LRIT1-201ENST00000372105 LAMC3Q9Y6N6 1575 aa24.68■■□□□ 1.54
LRIT1-201ENST00000372105 CSRNP3Q8WYN3 585 aa24.67■■□□□ 1.54
LRIT1-201ENST00000372105 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
LRIT1-201ENST00000372105 PDS5BQ9NTI5 1447 aa24.5■■□□□ 1.51
LRIT1-201ENST00000372105 FGD5Q6ZNL6 1462 aa24.48■■□□□ 1.51
LRIT1-201ENST00000372105 DNMBPQ6XZF7 1577 aa24.48■■□□□ 1.51
LRIT1-201ENST00000372105 GOLGA3Q08378 1498 aa24.46■■□□□ 1.51
LRIT1-201ENST00000372105 KIF21BO75037 1637 aa24.45■■□□□ 1.51
LRIT1-201ENST00000372105 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
LRIT1-201ENST00000372105 ACIN1Q9UKV3 1341 aaKnown RBP24.43■■□□□ 1.5
LRIT1-201ENST00000372105 KIF27Q86VH2 1401 aa24.43■■□□□ 1.5
LRIT1-201ENST00000372105 KIF21AQ7Z4S6 1674 aa24.42■■□□□ 1.5
LRIT1-201ENST00000372105 TNIKQ9UKE5 1360 aa24.41■■□□□ 1.5
LRIT1-201ENST00000372105 UBTFP17480 764 aaKnown RBP24.4■■□□□ 1.5
LRIT1-201ENST00000372105 URB2Q14146 1524 aaKnown RBP24.38■■□□□ 1.49
LRIT1-201ENST00000372105 CUX2O14529 1486 aa24.36■■□□□ 1.49
LRIT1-201ENST00000372105 MYT1Q01538 1121 aa24.33■■□□□ 1.49
LRIT1-201ENST00000372105 POLA1P09884 1462 aaPredicted RBP24.33■■□□□ 1.49
LRIT1-201ENST00000372105 RAPGEF2Q9Y4G8 1499 aa24.33■■□□□ 1.48
LRIT1-201ENST00000372105 CEP162Q5TB80 1403 aa24.31■■□□□ 1.48
LRIT1-201ENST00000372105 PRXQ9BXM0 1461 aa24.3■■□□□ 1.48
LRIT1-201ENST00000372105 RAD54L2Q9Y4B4 1467 aa24.29■■□□□ 1.48
LRIT1-201ENST00000372105 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
LRIT1-201ENST00000372105 ERICH3Q5RHP9 1530 aa24.25■■□□□ 1.47
LRIT1-201ENST00000372105 NEUROD1Q13562 356 aa24.25■■□□□ 1.47
LRIT1-201ENST00000372105 CENPBP07199 599 aaPredicted RBP24.24■■□□□ 1.47
LRIT1-201ENST00000372105 ABCA10Q8WWZ4 1543 aa24.24■■□□□ 1.47
LRIT1-201ENST00000372105 IGF1RP08069 1367 aa24.21■■□□□ 1.47
LRIT1-201ENST00000372105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.2■■□□□ 1.47
LRIT1-201ENST00000372105 MRC2Q9UBG0 1479 aa24.18■■□□□ 1.46
LRIT1-201ENST00000372105 DIEXFQ68CQ4 756 aaKnown RBP24.16■■□□□ 1.46
LRIT1-201ENST00000372105 WDR97A6NE52 1622 aa24.15■■□□□ 1.46
LRIT1-201ENST00000372105 CLIP1P30622 1438 aa24.09■■□□□ 1.45
LRIT1-201ENST00000372105 CARMIL1Q5VZK9 1371 aa24.09■■□□□ 1.45
LRIT1-201ENST00000372105 GTF3C3Q9Y5Q9 886 aa24.08■■□□□ 1.45
LRIT1-201ENST00000372105 ERCC6Q03468 1493 aa24.07■■□□□ 1.44
LRIT1-201ENST00000372105 TARBP1Q13395 1621 aaKnown RBP24.05■■□□□ 1.44
LRIT1-201ENST00000372105 WDR62O43379 1518 aa24.04■■□□□ 1.44
LRIT1-201ENST00000372105 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
LRIT1-201ENST00000372105 ABCA5Q8WWZ7 1642 aa24.04■■□□□ 1.44
LRIT1-201ENST00000372105 RANGAP1P46060 587 aaPredicted RBP24.02■■□□□ 1.44
LRIT1-201ENST00000372105 GAPVD1Q14C86 1478 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms