RNA–Protein interactions for RNA: ENST00000370902.7

EXOSC1-204, Transcript of exosome component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC1, Length 923 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-204ENST00000370902 CUL7Q14999 1698 aa19.81■□□□□ 0.76
EXOSC1-204ENST00000370902 MAPKBP1O60336 1514 aa19.81■□□□□ 0.76
EXOSC1-204ENST00000370902 JPH4Q96JJ6 628 aa19.8■□□□□ 0.76
EXOSC1-204ENST00000370902 DIP2BQ9P265 1576 aa19.79■□□□□ 0.76
EXOSC1-204ENST00000370902 ABCC10Q5T3U5 1492 aa19.76■□□□□ 0.75
EXOSC1-204ENST00000370902 KIAA0586Q9BVV6 1533 aa19.76■□□□□ 0.75
EXOSC1-204ENST00000370902 IGF1RP08069 1367 aa19.75■□□□□ 0.75
EXOSC1-204ENST00000370902 KIF27Q86VH2 1401 aa19.69■□□□□ 0.74
EXOSC1-204ENST00000370902 AEBP2Q6ZN18 517 aaPredicted RBP19.64■□□□□ 0.73
EXOSC1-204ENST00000370902 PPRC1Q5VV67 1664 aaKnown RBP19.59■□□□□ 0.73
EXOSC1-204ENST00000370902 IQGAP2Q13576 1575 aa19.59■□□□□ 0.73
EXOSC1-204ENST00000370902 FAM69CQ0P6D2 419 aa19.59■□□□□ 0.73
EXOSC1-204ENST00000370902 KDM6BO15054 1643 aa19.58■□□□□ 0.73
EXOSC1-204ENST00000370902 TSPOAP1O95153 1857 aa19.58■□□□□ 0.73
EXOSC1-204ENST00000370902 CARMIL1Q5VZK9 1371 aa19.57■□□□□ 0.72
EXOSC1-204ENST00000370902 DISP1Q96F81 1524 aa19.55■□□□□ 0.72
EXOSC1-204ENST00000370902 ABCC2Q92887 1545 aa19.54■□□□□ 0.72
EXOSC1-204ENST00000370902 PTPRGP23470 1445 aa19.51■□□□□ 0.71
EXOSC1-204ENST00000370902 GLI2P10070 1586 aa19.51■□□□□ 0.71
EXOSC1-204ENST00000370902 UHRF1BP1LA0JNW5 1464 aa19.5■□□□□ 0.71
EXOSC1-204ENST00000370902 TNIKQ9UKE5 1360 aa19.5■□□□□ 0.71
EXOSC1-204ENST00000370902 NPM1P06748 294 aaKnown RBP eCLIP19.49■□□□□ 0.71
EXOSC1-204ENST00000370902 UGGT2Q9NYU1 1516 aa19.48■□□□□ 0.71
EXOSC1-204ENST00000370902 KIAA0556O60303 1618 aa19.47■□□□□ 0.71
EXOSC1-204ENST00000370902 CARMIL2Q6F5E8 1435 aa19.46■□□□□ 0.71
EXOSC1-204ENST00000370902 ASXL2Q76L83 1435 aa19.45■□□□□ 0.7
EXOSC1-204ENST00000370902 ZCCHC11Q5TAX3 1644 aaKnown RBP19.43■□□□□ 0.7
EXOSC1-204ENST00000370902 MAP3K4Q9Y6R4 1608 aa19.43■□□□□ 0.7
EXOSC1-204ENST00000370902 KDM5BQ9UGL1 1544 aa19.43■□□□□ 0.7
EXOSC1-204ENST00000370902 UACAQ9BZF9 1416 aa19.42■□□□□ 0.7
EXOSC1-204ENST00000370902 PLB1Q6P1J6 1458 aa19.41■□□□□ 0.7
EXOSC1-204ENST00000370902 RAPGEF2Q9Y4G8 1499 aa19.41■□□□□ 0.7
EXOSC1-204ENST00000370902 CTTNBP2Q8WZ74 1663 aa19.41■□□□□ 0.7
EXOSC1-204ENST00000370902 KDM4FA0A1W2PPD8 638 aa19.39■□□□□ 0.69
EXOSC1-204ENST00000370902 EPRSP07814 1512 aaKnown RBP19.38■□□□□ 0.69
EXOSC1-204ENST00000370902 COL17A1Q9UMD9 1497 aaPredicted RBP19.37■□□□□ 0.69
EXOSC1-204ENST00000370902 TTBK1Q5TCY1 1321 aaPredicted RBP19.35■□□□□ 0.69
EXOSC1-204ENST00000370902 ABCA8O94911 1581 aa19.3■□□□□ 0.68
EXOSC1-204ENST00000370902 ADGRL1O94910 1474 aa19.26■□□□□ 0.67
EXOSC1-204ENST00000370902 PRXQ9BXM0 1461 aa19.26■□□□□ 0.67
EXOSC1-204ENST00000370902 WDR7Q9Y4E6 1490 aa19.26■□□□□ 0.67
EXOSC1-204ENST00000370902 CFAP43Q8NDM7 1665 aa19.23■□□□□ 0.67
EXOSC1-204ENST00000370902 TEX14Q8IWB6 1497 aa19.22■□□□□ 0.67
EXOSC1-204ENST00000370902 GOLGA3Q08378 1498 aa19.18■□□□□ 0.66
EXOSC1-204ENST00000370902 MAGI3Q5TCQ9 1506 aa19.17■□□□□ 0.66
EXOSC1-204ENST00000370902 SAMD9Q5K651 1589 aa19.14■□□□□ 0.65
EXOSC1-204ENST00000370902 CD109Q6YHK3 1445 aa19.08■□□□□ 0.65
EXOSC1-204ENST00000370902 HECW2Q9P2P5 1572 aa19.08■□□□□ 0.65
EXOSC1-204ENST00000370902 KIF21BO75037 1637 aa19.07■□□□□ 0.64
EXOSC1-204ENST00000370902 ABCA9Q8IUA7 1624 aa19.07■□□□□ 0.64
EXOSC1-204ENST00000370902 ATP10BO94823 1461 aa19.05■□□□□ 0.64
EXOSC1-204ENST00000370902 ARAP3Q8WWN8 1544 aa19.03■□□□□ 0.64
EXOSC1-204ENST00000370902 RAPGEF6Q8TEU7 1601 aa19.03■□□□□ 0.64
EXOSC1-204ENST00000370902 FRMPD1Q5SYB0 1578 aa19.01■□□□□ 0.63
EXOSC1-204ENST00000370902 KCNH8Q96L42 1107 aa18.96■□□□□ 0.63
EXOSC1-204ENST00000370902 NUP153P49790 1475 aaKnown RBP18.96■□□□□ 0.63
EXOSC1-204ENST00000370902 ADAMTSL3P82987 1691 aa18.94■□□□□ 0.62
EXOSC1-204ENST00000370902 P3H3Q8IVL6 736 aa18.92■□□□□ 0.62
EXOSC1-204ENST00000370902 ARID3CA6NKF2 412 aa18.91■□□□□ 0.62
EXOSC1-204ENST00000370902 ILDR1Q86SU0 546 aaPredicted RBP18.89■□□□□ 0.61
EXOSC1-204ENST00000370902 NEO1Q92859 1461 aa18.89■□□□□ 0.61
EXOSC1-204ENST00000370902 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
EXOSC1-204ENST00000370902 FHOD3Q2V2M9 1422 aa18.88■□□□□ 0.61
EXOSC1-204ENST00000370902 RICTORQ6R327 1708 aa18.88■□□□□ 0.61
EXOSC1-204ENST00000370902 BCORL1Q5H9F3 1711 aa18.87■□□□□ 0.61
EXOSC1-204ENST00000370902 EEA1Q15075 1411 aa18.85■□□□□ 0.61
EXOSC1-204ENST00000370902 ARHGEF40Q8TER5 1519 aa18.84■□□□□ 0.61
EXOSC1-204ENST00000370902 PHLDB1Q86UU1 1377 aa18.84■□□□□ 0.61
EXOSC1-204ENST00000370902 SIGLEC1Q9BZZ2 1709 aa18.84■□□□□ 0.61
EXOSC1-204ENST00000370902 TTC37Q6PGP7 1564 aa18.84■□□□□ 0.61
EXOSC1-204ENST00000370902 MADDQ8WXG6 1647 aa18.83■□□□□ 0.61
EXOSC1-204ENST00000370902 EFCAB5A4FU69 1503 aa18.82■□□□□ 0.6
EXOSC1-204ENST00000370902 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.82■□□□□ 0.6
EXOSC1-204ENST00000370902 PTPRMP28827 1452 aa18.82■□□□□ 0.6
EXOSC1-204ENST00000370902 RAPGEF3O95398 923 aa18.79■□□□□ 0.6
EXOSC1-204ENST00000370902 ZMYM4Q5VZL5 1548 aa18.78■□□□□ 0.6
EXOSC1-204ENST00000370902 CFAP74Q9C0B2 1584 aa18.77■□□□□ 0.6
EXOSC1-204ENST00000370902 CDK13Q14004 1512 aaKnown RBP18.75■□□□□ 0.59
EXOSC1-204ENST00000370902 RIMS1Q86UR5 1692 aaKnown RBP18.73■□□□□ 0.59
EXOSC1-204ENST00000370902 FANCAO15360 1455 aa18.72■□□□□ 0.59
EXOSC1-204ENST00000370902 AKNAQ7Z591 1439 aa18.72■□□□□ 0.59
EXOSC1-204ENST00000370902 DENND4BO75064 1496 aaPredicted RBP18.71■□□□□ 0.59
EXOSC1-204ENST00000370902 LMTK3Q96Q04 1460 aa18.71■□□□□ 0.59
EXOSC1-204ENST00000370902 PCF11O94913 1555 aaKnown RBP18.71■□□□□ 0.59
EXOSC1-204ENST00000370902 LRRIQ1Q96JM4 1722 aa18.71■□□□□ 0.59
EXOSC1-204ENST00000370902 HECW1Q76N89 1606 aa18.68■□□□□ 0.58
EXOSC1-204ENST00000370902 YEATS2Q9ULM3 1422 aa18.67■□□□□ 0.58
EXOSC1-204ENST00000370902 RANGAP1P46060 587 aaPredicted RBP18.67■□□□□ 0.58
EXOSC1-204ENST00000370902 ZFYVE16Q7Z3T8 1539 aa18.67■□□□□ 0.58
EXOSC1-204ENST00000370902 KIF14Q15058 1648 aa18.66■□□□□ 0.58
EXOSC1-204ENST00000370902 ARHGAP35Q9NRY4 1499 aa18.65■□□□□ 0.58
EXOSC1-204ENST00000370902 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.65■□□□□ 0.58
EXOSC1-204ENST00000370902 HNRNPUL2Q1KMD3 747 aaKnown RBP18.65■□□□□ 0.58
EXOSC1-204ENST00000370902 FAM9AQ8IZU1 332 aaPredicted RBP18.65■□□□□ 0.58
EXOSC1-204ENST00000370902 MYO5CQ9NQX4 1742 aa18.65■□□□□ 0.58
EXOSC1-204ENST00000370902 POGZQ7Z3K3 1410 aa18.63■□□□□ 0.57
EXOSC1-204ENST00000370902 FER1L4A9Z1Z3 1794 aa18.63■□□□□ 0.57
EXOSC1-204ENST00000370902 MAGI2Q86UL8 1455 aa18.61■□□□□ 0.57
EXOSC1-204ENST00000370902 PLCH2O75038 1416 aa18.61■□□□□ 0.57
EXOSC1-204ENST00000370902 PLEKHD1A6NEE1 506 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms